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PDB: 274 results

5FRA
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CBM40_CPF0721-6'SL
Descriptor: ACETATE ION, N-acetyl-alpha-neuraminic acid, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose, ...
Authors:Ribeiro, J.P, Pau, W, Pifferi, C, Renaudet, O, Varrot, A, Mahal, L.K, Imberty, A.
Deposit date:2015-12-16
Release date:2016-07-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Characterization of a High-Affinity Sialic Acid-Specific Cbm40 from Clostridium Perfringens and Engineering of a Divalent Form.
Biochem.J., 473, 2016
6FXF
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BU of 6fxf by Molmil
Crystal structure of the SAM domain of murine SLy1
Descriptor: SAM and SH3 domain-containing protein 3
Authors:Kukuk, L.K, Granzin, J, Batra-Safferling, R, Koenig, B.W.
Deposit date:2018-03-09
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of the SLy1 SAM homodimer reveals a new interface for SAM domain self-association.
Sci Rep, 9, 2019
5H0M
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Crystal structure of deep-sea thermophilic bacteriophage GVE2 HNH endonuclease with zinc ion
Descriptor: HNH endonuclease, ZINC ION
Authors:Zhang, L.K, Xu, D.D, Huang, Y.C, Gong, Y.
Deposit date:2016-10-05
Release date:2017-03-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structural and functional characterization of deep-sea thermophilic bacteriophage GVE2 HNH endonuclease
Sci Rep, 7, 2017
5T42
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Structure of the Ebola virus envelope protein MPER/TM domain and its interaction with the fusion loop explains their fusion activity
Descriptor: Envelope glycoprotein
Authors:Lee, J, Nyenhuis, D.A, Nelson, E.A, Cafiso, D.S, White, J.M, Tamm, L.K.
Deposit date:2016-08-28
Release date:2017-08-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the Ebola virus envelope protein MPER/TM domain and its interaction with the fusion loop explains their fusion activity.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5UKE
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BU of 5uke by Molmil
NMR structure of monomeric human IRAK-M Death Domain R56D, Y61E mutant
Descriptor: Interleukin-1 receptor-associated kinase 3
Authors:Kwon, J, Nicholson, L.K.
Deposit date:2017-01-20
Release date:2018-01-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The IL-33-PIN1-IRAK-M axis is critical for type 2 immunity in IL-33-induced allergic airway inflammation.
Nat Commun, 9, 2018
3U8I
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Functionally selective inhibition of Group IIA phospholipase A2 reveals a role for vimentin in regulating arachidonic acid metabolism
Descriptor: CALCIUM ION, CHLORIDE ION, Phospholipase A2, ...
Authors:Lee, L.K, Bryant, K.J, Bouveret, R, Lei, P.-W, Duff, A.P, Harrop, S.J, Huang, E.P, Harvey, R.P, Gelb, M.H, Gray, P.P, Curmi, P.M, Cunningham, A.M, Church, W.B, Scott, K.F.
Deposit date:2011-10-17
Release date:2012-10-17
Last modified:2013-06-12
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Selective Inhibition of Human Group IIA-secreted Phospholipase A2 (hGIIA) Signaling Reveals Arachidonic Acid Metabolism Is Associated with Colocalization of hGIIA to Vimentin in Rheumatoid Synoviocytes.
J.Biol.Chem., 288, 2013
2QMK
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BU of 2qmk by Molmil
Human pancreatic alpha-amylase complexed with nitrite
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, NITRITE ION, ...
Authors:Williams, L.K, Maurus, R, Brayer, G.D.
Deposit date:2007-07-16
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Alternative catalytic anions differentially modulate human alpha-amylase activity and specificity
Biochemistry, 47, 2008
5I5M
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Shewanella denitrificans nitrous oxide reductase, Ca2+-reconstituted form
Descriptor: (R,R)-2,3-BUTANEDIOL, CALCIUM ION, Nitrous-oxide reductase, ...
Authors:Schneider, L.K, Einsle, O.
Deposit date:2016-02-15
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Role of Calcium in Secondary Structure Stabilization during Maturation of Nitrous Oxide Reductase.
Biochemistry, 55, 2016
5I5J
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Shewanella denitrificans nitrous oxide reductase, reduced apo form
Descriptor: Nitrous-oxide reductase
Authors:Schneider, L.K, Einsle, O.
Deposit date:2016-02-15
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Role of Calcium in Secondary Structure Stabilization during Maturation of Nitrous Oxide Reductase.
Biochemistry, 55, 2016
5I5I
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Shewanella denitrificans nitrous oxide reductase, app form
Descriptor: Nitrous-oxide reductase
Authors:Schneider, L.K, Einsle, O.
Deposit date:2016-02-15
Release date:2016-03-02
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Role of Calcium in Secondary Structure Stabilization during Maturation of Nitrous Oxide Reductase.
Biochemistry, 55, 2016
2QV4
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BU of 2qv4 by Molmil
Human pancreatic alpha-amylase complexed with nitrite and acarbose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4,6-dideoxy-4-{[(1S,4R,5R,6S)-4-{[alpha-D-glucopyranosyl-(1->4)-alpha-D-glucopyranosyl-(1->4)-alpha-D-glucopyranosyl]oxy}-5,6-dihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose, CALCIUM ION, ...
Authors:Williams, L.K, Maurus, R, Brayer, G.D.
Deposit date:2007-08-07
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Alternative catalytic anions differentially modulate human alpha-amylase activity and specificity
Biochemistry, 47, 2008
3QIB
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BU of 3qib by Molmil
Crystal structure of the 2B4 TCR in complex with MCC/I-Ek
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2B4 beta chain, DI(HYDROXYETHYL)ETHER, ...
Authors:Ely, L.K, Newell, E.W, Davis, M.M, Garcia, K.C.
Deposit date:2011-01-26
Release date:2011-04-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of specificity and cross-reactivity in T cell receptors specific for cytochrome c-I-E(k).
J.Immunol., 186, 2011
1R7A
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BU of 1r7a by Molmil
Sucrose Phosphorylase from Bifidobacterium adolescentis
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, sucrose phosphorylase
Authors:Sprogoe, D, van den Broek, L.A.M, Mirza, O, Kastrup, J.S, Voragen, A.G.J, Gajhede, M, Skov, L.K.
Deposit date:2003-10-21
Release date:2004-02-10
Last modified:2014-11-19
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal structure of sucrose phosphorylase from Bifidobacterium adolescentis.
Biochemistry, 43, 2004
1R5E
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BU of 1r5e by Molmil
Solution structure of the folded core of Pseudomonas syringae effector protein, AvrPto
Descriptor: avirulence protein
Authors:Wulf, J, Pascuzzi, P.E, Martin, G.B, Nicholson, L.K.
Deposit date:2003-10-10
Release date:2004-10-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The solution structure of type III effector protein AvrPto reveals conformational and dynamic features important for plant pathogenesis.
STRUCTURE, 12, 2004
3V6I
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BU of 3v6i by Molmil
Crystal structure of the peripheral stalk of Thermus thermophilus H+-ATPase/synthase at 2.25 A resolution
Descriptor: CALCIUM ION, SODIUM ION, V-type ATP synthase subunit E, ...
Authors:Stewart, A.G, Lee, L.K, Donohoe, M, Chaston, J.J, Stock, D.
Deposit date:2011-12-19
Release date:2012-02-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The dynamic stator stalk of rotary ATPases
Nat Commun, 3, 2012
5JHD
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BU of 5jhd by Molmil
Crystal structure of LS10-TCR/M1-HLA-A*02 complex
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ...
Authors:Stern, L.J, Selin, L.K, Song, I.
Deposit date:2016-04-20
Release date:2017-03-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Broad TCR repertoire and diverse structural solutions for recognition of an immunodominant CD8(+) T cell epitope.
Nat. Struct. Mol. Biol., 24, 2017
3U8H
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BU of 3u8h by Molmil
Functionally selective inhibition of Group IIA phospholipase A2 reveals a role for vimentin in regulating arachidonic acid metabolism
Descriptor: (S)-5-(4-BENZYLOXY-PHENYL)-4-(7-PHENYL-HEPTANOYLAMINO)-PENTANOIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Lee, L.K, Bryant, K.J, Bouveret, R, Lei, P.-W, Duff, A.P, Harrop, S.J, Huang, E.P, Harvey, R.P, Gelb, M.H, Gray, P.P, Curmi, P.M, Cunningham, A.M, Church, W.B, Scott, K.F.
Deposit date:2011-10-17
Release date:2012-10-17
Last modified:2013-06-12
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Selective Inhibition of Human Group IIA-secreted Phospholipase A2 (hGIIA) Signaling Reveals Arachidonic Acid Metabolism Is Associated with Colocalization of hGIIA to Vimentin in Rheumatoid Synoviocytes.
J.Biol.Chem., 288, 2013
3U8D
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BU of 3u8d by Molmil
Functionally selective inhibition of Group IIA phospholipase A2 reveals a role for vimentin in regulating arachidonic acid metabolism
Descriptor: (3-{[3-(2-amino-2-oxoethyl)-1-benzyl-2-ethyl-1H-indol-5-yl]oxy}propyl)phosphonic acid, CALCIUM ION, CHLORIDE ION, ...
Authors:Lee, L.K, Bryant, K.J, Bouveret, R, Lei, P.-W, Duff, A.P, Harrop, S.J, Huang, E.P, Harvey, R.P, Gelb, M.H, Gray, P.P, Curmi, P.M, Cunningham, A.M, Church, W.B, Scott, K.F.
Deposit date:2011-10-16
Release date:2012-10-17
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (1.805 Å)
Cite:Selective Inhibition of Human Group IIA-secreted Phospholipase A2 (hGIIA) Signaling Reveals Arachidonic Acid Metabolism Is Associated with Colocalization of hGIIA to Vimentin in Rheumatoid Synoviocytes.
J.Biol.Chem., 288, 2013
3QJH
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BU of 3qjh by Molmil
The crystal structure of the 5c.c7 TCR
Descriptor: 5c.c7 alpha chain, 5c.c7 beta chain
Authors:Ely, L.K, Newell, E.W, Davis, M.M, Garcia, K.C.
Deposit date:2011-01-28
Release date:2011-04-27
Last modified:2011-08-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis of specificity and cross-reactivity in T cell receptors specific for cytochrome c-I-E(k).
J.Immunol., 186, 2011
2PXY
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BU of 2pxy by Molmil
Crystal structures of immune receptor complexes
Descriptor: H-2 class II histocompatibility antigen, A-U alpha chain, A-U beta chain, ...
Authors:Feng, D, Bond, C.J, Ely, L.K, Garcia, K.C.
Deposit date:2007-05-14
Release date:2007-10-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Structural evidence for a germline-encoded T cell receptor-major histocompatibility complex interaction 'codon'.
Nat.Immunol., 8, 2007
3QJF
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Crystal structure of the 2B4 TCR
Descriptor: 2B4 alpha chain, 2B4 beta chain
Authors:Ely, L.K, Newell, E.W, Davis, M.M, Garcia, K.C.
Deposit date:2011-01-28
Release date:2011-04-27
Last modified:2011-08-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of specificity and cross-reactivity in T cell receptors specific for cytochrome c-I-E(k).
J.Immunol., 186, 2011
5ISZ
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BU of 5isz by Molmil
Crystal structure of LS01-TCR/M1-HLA-A*02 complex
Descriptor: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
Authors:Stern, L.J, Selin, L.K, Song, I.
Deposit date:2016-03-15
Release date:2017-03-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Broad TCR repertoire and diverse structural solutions for recognition of an immunodominant CD8(+) T cell epitope.
Nat. Struct. Mol. Biol., 24, 2017
2PJV
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solution structure of hiv-1 gp41 fusion domain bound to DPC micelle
Descriptor: Envelope glycoprotein
Authors:Li, Y, Tamm, L.K.
Deposit date:2007-04-16
Release date:2007-05-01
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure and Plasticity of the Human Immunodeficiency Virus gp41 Fusion Domain in Lipid Micelles and Bilayers.
Biophys.J., 93, 2007
1S46
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BU of 1s46 by Molmil
Covalent intermediate of the E328Q amylosucrase mutant
Descriptor: amylosucrase, beta-D-glucopyranose
Authors:Jensen, M.H, Mirza, O, Albenne, C, Remaud-Simeon, M, Monsan, P, Gajhede, M, Skov, L.K.
Deposit date:2004-01-15
Release date:2004-03-23
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the covalent intermediate of amylosucrase from Neisseria polysaccharea.
Biochemistry, 43, 2004
3U8B
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BU of 3u8b by Molmil
Functionally selective inhibition of Group IIA phospholipase A2 reveals a role for vimentin in regulating arachidonic acid metabolism
Descriptor: CALCIUM ION, CHLORIDE ION, Phospholipase A2, ...
Authors:Lee, L.K, Bryant, K.J, Bouveret, R, Lei, P.-W, Duff, A.P, Harrop, S.J, Huang, E.P, Harvey, R.P, Gelb, M.H, Gray, P.P, Curmi, P.M, Cunningham, A.M, Church, W.B, Scott, K.F.
Deposit date:2011-10-16
Release date:2012-10-17
Last modified:2013-06-12
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:Selective Inhibition of Human Group IIA-secreted Phospholipase A2 (hGIIA) Signaling Reveals Arachidonic Acid Metabolism Is Associated with Colocalization of hGIIA to Vimentin in Rheumatoid Synoviocytes.
J.Biol.Chem., 288, 2013

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