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PDB: 84 results

5W44
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BU of 5w44 by Molmil
Crystal structure of the influenza virus PA endonuclease in complex with inhibitor 7a (SRI-29770)
Descriptor: 2-[(2S)-1-(2,6-dichlorobenzene-1-carbonyl)pyrrolidin-2-yl]-5-hydroxy-6-oxo-N-(2-phenylethyl)-1,6-dihydropyrimidine-4-carboxamide, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Kumar, G, White, S.W.
Deposit date:2017-06-09
Release date:2018-01-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Protein-Structure Assisted Optimization of 4,5-Dihydroxypyrimidine-6-Carboxamide Inhibitors of Influenza Virus Endonuclease.
Sci Rep, 7, 2017
5VPT
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BU of 5vpt by Molmil
2009 H1N1 PA Endonuclease in complex with RO-7
Descriptor: 1-[(11S)-6,11-dihydrodibenzo[b,e]thiepin-11-yl]-5-hydroxy-3-[(2R)-1,1,1-trifluoropropan-2-yl]-2,3-dihydro-1H-pyrido[2,1-f][1,2,4]triazine-4,6-dione, MANGANESE (II) ION, Polymerase acidic protein, ...
Authors:Kumar, G, White, S.W.
Deposit date:2017-05-05
Release date:2018-04-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Identification of the I38T PA Substitution as a Resistance Marker for Next-Generation Influenza Virus Endonuclease Inhibitors.
MBio, 9, 2018
5WEB
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BU of 5web by Molmil
Crystal structure of the influenza virus PA endonuclease in complex with inhibitor 10e (SRI-30024)
Descriptor: 2-[(2S)-1-{[(2-chlorophenyl)sulfanyl]acetyl}pyrrolidin-2-yl]-5-hydroxy-6-oxo-N-[2-(phenylsulfonyl)ethyl]-1,6-dihydropyrimidine-4-carboxamide, MANGANESE (II) ION, Polymerase acidic protein, ...
Authors:Kumar, G, White, S.W.
Deposit date:2017-07-08
Release date:2018-01-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.254 Å)
Cite:Protein-Structure Assisted Optimization of 4,5-Dihydroxypyrimidine-6-Carboxamide Inhibitors of Influenza Virus Endonuclease.
Sci Rep, 7, 2017
5WB3
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BU of 5wb3 by Molmil
Crystal structure of the influenza virus PA endonuclease in complex with inhibitor 10j (SRI-30026)
Descriptor: 2-[(2S)-1-{[(2-chlorophenyl)sulfanyl]acetyl}pyrrolidin-2-yl]-N-(5,6-dimethoxy-2,3-dihydro-1H-inden-2-yl)-5-hydroxy-6-ox o-1,6-dihydropyrimidine-4-carboxamide, MANGANESE (II) ION, Polymerase acidic protein, ...
Authors:Kumar, G, White, S.W.
Deposit date:2017-06-27
Release date:2018-01-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.203 Å)
Cite:Protein-Structure Assisted Optimization of 4,5-Dihydroxypyrimidine-6-Carboxamide Inhibitors of Influenza Virus Endonuclease.
Sci Rep, 7, 2017
5WDC
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BU of 5wdc by Molmil
Crystal structure of the influenza virus PA endonuclease in complex with inhibitor 9e (SRI-29843)
Descriptor: 2-{(2S)-1-[(2-chlorophenoxy)acetyl]pyrrolidin-2-yl}-5-hydroxy-6-oxo-N-(2-phenylethyl)-1,6-dihydropyrimidine-4-carboxamide, MANGANESE (II) ION, Polymerase acidic protein, ...
Authors:Kumar, G, White, S.W.
Deposit date:2017-07-04
Release date:2018-01-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Protein-Structure Assisted Optimization of 4,5-Dihydroxypyrimidine-6-Carboxamide Inhibitors of Influenza Virus Endonuclease.
Sci Rep, 7, 2017
5WE7
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BU of 5we7 by Molmil
Crystal structure of the influenza virus PA endonuclease in complex with an inhibitor - SRI-29782
Descriptor: 2-{(2R)-1-[2-(4-chlorophenoxy)-2-methylpropanoyl]pyrrolidin-2-yl}-5-hydroxy-6-oxo-1,6-dihydropyrimidine-4-carboxylic acid, D-MALATE, MANGANESE (II) ION, ...
Authors:Kumar, G, White, S.W.
Deposit date:2017-07-07
Release date:2018-01-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Crystal structure of the influenza virus PA endonuclease in complex with an inhibitor - SRI-29782
To Be Published
5INB
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BU of 5inb by Molmil
RepoMan-PP1g (protein phosphatase 1, gamma isoform) holoenzyme complex
Descriptor: Cell division cycle-associated protein 2, GLYCEROL, MALONATE ION, ...
Authors:Kumar, G.S, Peti, W, Page, R.
Deposit date:2016-03-07
Release date:2016-10-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The Ki-67 and RepoMan mitotic phosphatases assemble via an identical, yet novel mechanism.
Elife, 5, 2016
6O61
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BU of 6o61 by Molmil
Tubulin-RB3_SLD-TTL in complex with compound ABI-231
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Kumar, G, Wang, Y, Li, W, White, S.W.
Deposit date:2019-03-05
Release date:2019-07-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.599 Å)
Cite:Structure-Guided Design, Synthesis, and Biological Evaluation of (2-(1H-Indol-3-yl)-1H-imidazol-4-yl)(3,4,5-trimethoxyphenyl) Methanone (ABI-231) Analogues Targeting the Colchicine Binding Site in Tubulin.
J.Med.Chem., 62, 2019
6PC4
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BU of 6pc4 by Molmil
Tubulin-RB3_SLD-TTL in complex with compound ABI-274
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Kumar, G, Wang, Y, Li, W, White, S.W.
Deposit date:2019-06-15
Release date:2020-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.602 Å)
Cite:Structure-Activity Relationship Study of Novel 6-Aryl-2-benzoyl-pyridines as Tubulin Polymerization Inhibitors with Potent Antiproliferative Properties.
J.Med.Chem., 63, 2020
5IOH
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BU of 5ioh by Molmil
RepoMan-PP1a (protein phosphatase 1, alpha isoform) holoenzyme complex
Descriptor: Cell division cycle-associated protein 2, Serine/threonine-protein phosphatase PP1-alpha catalytic subunit
Authors:Kumar, G.S, Peti, W, Page, R.
Deposit date:2016-03-08
Release date:2016-10-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.566 Å)
Cite:The Ki-67 and RepoMan mitotic phosphatases assemble via an identical, yet novel mechanism.
Elife, 5, 2016
5J28
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BU of 5j28 by Molmil
Ki67-PP1g (protein phosphatase 1, gamma isoform) holoenzyme complex
Descriptor: Antigen KI-67, MALONATE ION, SODIUM ION, ...
Authors:Kumar, G.S, Peti, W, Page, R.
Deposit date:2016-03-29
Release date:2016-10-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Ki-67 and RepoMan mitotic phosphatases assemble via an identical, yet novel mechanism.
Elife, 5, 2016
5VP8
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BU of 5vp8 by Molmil
I38T mutant of 2009 H1N1 PA Endonuclease
Descriptor: 1-[(3R,5S,7R)-1,5,7,9-tetrakis(2-oxopyrrolidin-1-yl)nonan-3-yl]-1,3-dihydro-2H-pyrrol-2-one, MANGANESE (II) ION, Polymerase acidic protein, ...
Authors:Kumar, G, White, S.W.
Deposit date:2017-05-04
Release date:2018-04-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Identification of the I38T PA Substitution as a Resistance Marker for Next-Generation Influenza Virus Endonuclease Inhibitors.
MBio, 9, 2018
5VRJ
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BU of 5vrj by Molmil
2009 H1N1 PA Endonuclease in complex with RO-7 and Magnesium
Descriptor: 1-[(11S)-6,11-dihydrodibenzo[b,e]thiepin-11-yl]-5-hydroxy-3-[(2R)-1,1,1-trifluoropropan-2-yl]-2,3-dihydro-1H-pyrido[2,1-f][1,2,4]triazine-4,6-dione, MAGNESIUM ION, Polymerase acidic protein, ...
Authors:Kumar, G, White, S.W.
Deposit date:2017-05-10
Release date:2018-04-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Identification of the I38T PA Substitution as a Resistance Marker for Next-Generation Influenza Virus Endonuclease Inhibitors.
MBio, 9, 2018
5VPX
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BU of 5vpx by Molmil
I38T mutant of 2009 H1N1 PA Endonuclease in complex with RO-7
Descriptor: 1-[(11S)-6,11-dihydrodibenzo[b,e]thiepin-11-yl]-5-hydroxy-3-[(2R)-1,1,1-trifluoropropan-2-yl]-2,3-dihydro-1H-pyrido[2,1-f][1,2,4]triazine-4,6-dione, MANGANESE (II) ION, Polymerase acidic protein, ...
Authors:Kumar, G, White, S.W.
Deposit date:2017-05-06
Release date:2018-04-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Identification of the I38T PA Substitution as a Resistance Marker for Next-Generation Influenza Virus Endonuclease Inhibitors.
MBio, 9, 2018
5VQN
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BU of 5vqn by Molmil
E119D mutant of 2009 H1N1 PA Endonuclease in complex with RO-7
Descriptor: 1-[(11S)-6,11-dihydrodibenzo[b,e]thiepin-11-yl]-5-hydroxy-3-[(2R)-1,1,1-trifluoropropan-2-yl]-2,3-dihydro-1H-pyrido[2,1-f][1,2,4]triazine-4,6-dione, MANGANESE (II) ION, Polymerase acidic protein, ...
Authors:Kumar, G, White, S.W.
Deposit date:2017-05-09
Release date:2018-04-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Identification of the I38T PA Substitution as a Resistance Marker for Next-Generation Influenza Virus Endonuclease Inhibitors.
MBio, 9, 2018
5W3I
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BU of 5w3i by Molmil
Crystal structure of the influenza virus PA endonuclease in complex with inhibitor 6e (SRI-29685)
Descriptor: 5-hydroxy-N-(2-methoxyethyl)-6-oxo-2-[(2S)-1-(phenoxyacetyl)pyrrolidin-2-yl]-1,6-dihydropyrimidine-4-carboxamide, GLYCEROL, MANGANESE (II) ION, ...
Authors:Kumar, G, White, S.W.
Deposit date:2017-06-07
Release date:2017-12-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Protein-Structure Assisted Optimization of 4,5-Dihydroxypyrimidine-6-Carboxamide Inhibitors of Influenza Virus Endonuclease.
Sci Rep, 7, 2017
5EGA
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BU of 5ega by Molmil
2009 H1N1 PA endonuclease domain in complex with an N-acylhydrazone inhibitor
Descriptor: 3,4,5-tris(oxidanyl)-~{N}-[(~{E})-[3,4,5-tris(oxidanyl)phenyl]methylideneamino]benzamide, MANGANESE (II) ION, Polymerase acidic protein
Authors:Kumar, G, White, S.W.
Deposit date:2015-10-26
Release date:2016-08-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:N-acylhydrazone inhibitors of influenza virus PA endonuclease with versatile metal binding modes.
Sci Rep, 6, 2016
3IH0
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BU of 3ih0 by Molmil
Crystal structure of an uncharacterized sugar kinase PH1459 from Pyrococcus horikoshii in complex with AMP-PNP
Descriptor: GLYCEROL, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Uncharacterized sugar kinase PH1459
Authors:Kumar, G, Eswaramoorthy, S, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-29
Release date:2009-09-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of an uncharacterized sugar kinase PH1459 from Pyrococcus horikoshii in complex with AMP-PNP
To be Published
6NNG
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BU of 6nng by Molmil
Tubulin-RB3_SLD-TTL in complex with compound DJ95
Descriptor: 2-(1H-indol-6-yl)-4-(3,4,5-trimethoxyphenyl)-1H-imidazo[4,5-c]pyridine, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Kumar, G, Wang, Y, Li, W, White, S.W.
Deposit date:2019-01-15
Release date:2019-07-10
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2.397 Å)
Cite:Colchicine Binding Site Agent DJ95 Overcomes Drug Resistance and Exhibits Antitumor Efficacy.
Mol.Pharmacol., 96, 2019
6O5M
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BU of 6o5m by Molmil
Tubulin-RB3_SLD-TTL in complex with compound 10bb
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GLYCEROL, ...
Authors:Kumar, G, Wang, Y, Li, W, White, S.W.
Deposit date:2019-03-04
Release date:2019-07-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-Guided Design, Synthesis, and Biological Evaluation of (2-(1H-Indol-3-yl)-1H-imidazol-4-yl)(3,4,5-trimethoxyphenyl) Methanone (ABI-231) Analogues Targeting the Colchicine Binding Site in Tubulin.
J.Med.Chem., 62, 2019
6O5N
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BU of 6o5n by Molmil
Tubulin-RB3_SLD-TTL in complex with compound 10ab
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Kumar, G, Wang, Y, Li, W, White, S.W.
Deposit date:2019-03-04
Release date:2019-07-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.003 Å)
Cite:Structure-Guided Design, Synthesis, and Biological Evaluation of (2-(1H-Indol-3-yl)-1H-imidazol-4-yl)(3,4,5-trimethoxyphenyl) Methanone (ABI-231) Analogues Targeting the Colchicine Binding Site in Tubulin.
J.Med.Chem., 62, 2019
2KTC
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BU of 2ktc by Molmil
Solution Structure of a Novel hKv1.1 inhibiting scorpion toxin from Mesibuthus tamulus
Descriptor: Potassium channel toxin alpha-KTx 9.4
Authors:Kumar, G.S, Upadhyay, S, Mathew, M.K, Sarma, S.P.
Deposit date:2010-01-26
Release date:2011-02-02
Last modified:2019-12-25
Method:SOLUTION NMR
Cite:Solution structure of BTK-2, a novel hK(v)1.1 inhibiting scorpion toxin, from the eastern Indian scorpion Mesobuthus tamulus.
Biochim.Biophys.Acta, 1814, 2011
3EWM
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BU of 3ewm by Molmil
Crystal structure of an uncharacterized sugar kinase PH1459 from pyrococcus horikoshii
Descriptor: Uncharacterized sugar kinase PH1459
Authors:Kumar, G, Eswaramoorthy, S, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-10-15
Release date:2008-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of an uncharacterized sugar kinase PH1459 from pyrococcus horikoshii
To be Published
6BS2
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BU of 6bs2 by Molmil
Tubulin-RB3_SLD-TTL in complex with heterocyclic pyrimidine compound 8b
Descriptor: 1-(3,6-dimethyl[1,2]oxazolo[5,4-d]pyrimidin-4-yl)-6-methoxy-1,2,3,4-tetrahydroquinoline, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Kumar, G, Wang, Y, Li, W, White, S.W.
Deposit date:2017-12-01
Release date:2018-06-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Heterocyclic-Fused Pyrimidines as Novel Tubulin Polymerization Inhibitors Targeting the Colchicine Binding Site: Structural Basis and Antitumor Efficacy.
J. Med. Chem., 61, 2018
6BRY
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BU of 6bry by Molmil
Tubulin-RB3_SLD-TTL in complex with heterocyclic pyrimidine compound 6a
Descriptor: 1-(2-chlorofuro[3,2-d]pyrimidin-4-yl)-6-methoxy-1,2,3,4-tetrahydroquinoline, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Kumar, G, Wang, Y, Li, W, White, S.W.
Deposit date:2017-12-01
Release date:2018-06-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Heterocyclic-Fused Pyrimidines as Novel Tubulin Polymerization Inhibitors Targeting the Colchicine Binding Site: Structural Basis and Antitumor Efficacy.
J. Med. Chem., 61, 2018

 

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