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PDB: 73 件

1K4R
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Structure of Dengue Virus
分子名称: MAJOR ENVELOPE PROTEIN E
著者Kuhn, R.J, Zhang, W, Rossmann, M.G, Pletnev, S.V, Corver, J, Lenches, E, Jones, C.T, Mukhopadhyay, S, Chipman, P.R, Strauss, E.G, Baker, T.S, Strauss, J.H.
登録日2001-10-08
公開日2002-03-13
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (24 Å)
主引用文献Structure of dengue virus: implications for flavivirus organization, maturation, and fusion.
Cell(Cambridge,Mass.), 108, 2002
2R6P
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Fit of E protein and Fab 1A1D-2 into 24 angstrom resolution cryoEM map of Fab complexed with dengue 2 virus.
分子名称: Heavy chain of 1A1D-2, Light chain of 1A1D-2, Major envelope protein E
著者Lok, S.M, Kostyuchenko, V.K, Holdaway, H.A, Chipman, P.R, Kuhn, R.J, Rossmann, M.G.
登録日2007-09-06
公開日2007-12-25
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (24 Å)
主引用文献Binding of a neutralizing antibody to dengue virus alters the arrangement of surface glycoproteins.
Nat.Struct.Mol.Biol., 15, 2008
4UOM
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Electron Cryo-microscopy of Venezuelan Equine Encephalitis Virus TC- 83 in complex with neutralizing antibody Fab F5
分子名称: FAB FRAGMENT HEAVY CHAIN, FAB FRAGMENT LIGHT CHAIN
著者Porta, J, Jose, J, Roehrig, J.T, Blair, C.D, Kuhn, R.J, Rossmann, M.G.
登録日2014-06-05
公開日2014-10-15
最終更新日2017-08-23
実験手法ELECTRON MICROSCOPY (17 Å)
主引用文献Locking and Blocking the Viral Landscape of an Alphavirus with Neutralizing Antibodies.
J.Virol., 88, 2014
4UOK
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Electron Cryo-microscopy of Venezuelan Equine Encephalitis Virus TC-83 in complex with neutralizing antibody Fab 3B4C-4
分子名称: FAB FRAGMENT HEAVY CHAIN, FAB FRAGMENT LIGHT CHAIN
著者Porta, J, Jose, J, Roehrig, J.T, Blair, C.D, Kuhn, R.J, Rossmann, M.G.
登録日2014-06-04
公開日2014-09-17
最終更新日2019-05-29
実験手法ELECTRON MICROSCOPY (18 Å)
主引用文献Locking and blocking the viral landscape of an alphavirus with neutralizing antibodies.
J.Virol., 88, 2014
3C6R
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Low pH Immature Dengue Virus
分子名称: Envelope protein, Peptide pr
著者Yu, I, Zhang, W, Holdway, H.A, Li, L, Kostyuchenko, V.A, Chipman, P.R, Kuhn, R.J, Rossmann, M.G, Chen, J.
登録日2008-02-05
公開日2008-04-22
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (25 Å)
主引用文献Structure of the immature dengue virus at low pH primes proteolytic maturation
Science, 319, 2008
8FE4
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Structure of dengue virus (DENV2) in complex with prM13, an anti-PrM monoclonal antibody
分子名称: Envelope protein E, prM protein, prM13 Fab Heavy Chain, ...
著者Dowd, A.D, Sirohi, D, Speer, S, Mukherjee, S, Govero, J, Aleshnick, M, Larman, B, Sukupolvi-Petty, S, Sevvana, M, Miller, A.S, Klose, T, Zheng, A, Kielian, M, Kuhn, R.J, Diamond, M.S, Pierson, T.C.
登録日2022-12-05
公開日2023-02-01
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (9.8 Å)
主引用文献prM-reactive antibodies reveal a role for partially mature virions in dengue virus pathogenesis.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FE3
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Structure of dengue virus (DENV2) in complex with prM12, an anti-PrM monoclonal antibody
分子名称: Envelope protein E, prM protein, prM12 Fab Heavy Chain, ...
著者Dowd, A.D, Sirohi, D, Speer, S, Mukherjee, S, Govero, J, Aleshnick, M, Larman, B, Sukupolvi-Petty, S, Sevvana, M, Miller, A.S, Klose, T, Zheng, A, Kielian, M, Kuhn, R.J, Diamond, M.S, Pierson, T.C.
登録日2022-12-05
公開日2023-02-01
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (10.2 Å)
主引用文献prM-reactive antibodies reveal a role for partially mature virions in dengue virus pathogenesis.
Proc.Natl.Acad.Sci.USA, 120, 2023
6CO8
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Structure of Zika virus at a resolution of 3.1 Angstrom
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, E protein, M protein
著者Sevvana, M, Long, F, Miller, A.J, Klose, T, Buda, G, Sun, L, Kuhn, R.J, Rossmann, M.R.
登録日2018-03-12
公開日2018-07-04
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Refinement and Analysis of the Mature Zika Virus Cryo-EM Structure at 3.1 angstrom Resolution.
Structure, 26, 2018
4WM7
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Crystal Structure of Human Enterovirus D68 in Complex with Pleconaril
分子名称: 3-{3,5-DIMETHYL-4-[3-(3-METHYL-ISOXAZOL-5-YL)-PROPOXY]-PHENYL}-5-TRIFLUOROMETHYL-[1,2,4]OXADIAZOLE, VP1, VP2, ...
著者Liu, Y, Sheng, J, Fokine, A, Meng, G, Long, F, Kuhn, R.J, Rossmann, M.G.
登録日2014-10-08
公開日2015-01-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Virus structure. Structure and inhibition of EV-D68, a virus that causes respiratory illness in children.
Science, 347, 2015
4WM8
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Crystal Structure of Human Enterovirus D68
分子名称: DECANOIC ACID, VP1, VP2, ...
著者Liu, Y, Sheng, J, Fokine, A, Meng, G, Long, F, Kuhn, R.J, Rossmann, M.G.
登録日2014-10-08
公開日2015-01-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Virus structure. Structure and inhibition of EV-D68, a virus that causes respiratory illness in children.
Science, 347, 2015
7N69
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Pre-fusion state 2 of EEEV with localized reconstruction
分子名称: Spike glycoprotein E1, Spike glycoprotein E2
著者Chen, C.-L, Kuhn, R.J, Klose, T.
登録日2021-06-07
公開日2022-06-22
最終更新日2022-08-03
実験手法ELECTRON MICROSCOPY (14.1 Å)
主引用文献Cryo-EM structures of alphavirus conformational intermediates in low pH-triggered prefusion states.
Proc.Natl.Acad.Sci.USA, 119, 2022
7N6A
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Pre-fusion state 1 of EEEV with localized reconstruction
分子名称: Spike glycoprotein E1, Spike glycoprotein E2
著者Chen, C.-L, Kuhn, R.J, Klose, T.
登録日2021-06-07
公開日2022-06-22
最終更新日2022-08-03
実験手法ELECTRON MICROSCOPY (14.3 Å)
主引用文献Cryo-EM structures of alphavirus conformational intermediates in low pH-triggered prefusion states.
Proc.Natl.Acad.Sci.USA, 119, 2022
7T17
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Zika Virus asymmetric unit bound with IgM antibody DH1017 Fab fragment
分子名称: Core protein, DH1017.IgM FabC constant domain, DH1017.IgM IgH, ...
著者Miller, A.S, Kuhn, R.J.
登録日2021-12-01
公開日2022-11-23
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (5.26 Å)
主引用文献A Zika virus-specific IgM elicited in pregnancy exhibits ultrapotent neutralization.
Cell, 185, 2022
1WYK
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SINDBIS VIRUS CAPSID PROTEIN (114-264)
分子名称: 1,4-DIETHYLENE DIOXIDE, FORMYL GROUP, SINDBIS VIRUS CAPSID PROTEIN
著者Lee, S, Kuhn, R.J, Rossmann, M.G.
登録日1998-01-12
公開日1998-04-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Probing the potential glycoprotein binding site of sindbis virus capsid protein with dioxane and model building.
Proteins, 33, 1998
3IYA
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BU of 3iya by Molmil
Association of the pr peptides with dengue virus blocks membrane fusion at acidic pH
分子名称: Envelope protein, prM protein
著者Yu, I, Holdaway, H.A, Chipman, P.R, Kuhn, R.J, Rossmann, M.G, Chen, J.
登録日2009-06-01
公開日2010-04-14
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (22 Å)
主引用文献Association of the pr peptides with dengue virus at acidic pH blocks membrane fusion.
J.Virol., 83, 2009
2B6B
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Cryo EM structure of Dengue complexed with CRD of DC-SIGN
分子名称: CD209 antigen, envelope glycoprotein
著者Pokidysheva, E, Zhang, Y, Battisti, A.J, Bator-Kelly, C.M, Chipman, P.R, Gregorio, G, Hendrickson, W.A, Kuhn, R.J, Rossmann, M.G.
登録日2005-09-30
公開日2006-03-07
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (25 Å)
主引用文献Cryo-EM reconstruction of dengue virus in complex with the carbohydrate recognition domain of DC-SIGN
Cell(Cambridge,Mass.), 124, 2006
7T9P
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Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain native virion
分子名称: viral protein 1, viral protein 2, viral protein 3, ...
著者Fu, J, Klose, T, Kuhn, R.J, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-12-19
公開日2023-01-25
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2 Å)
主引用文献Isoxazole-3-Carboxamide Derivatives of Pleconaril Destabilize the Viral Capsid of Enterovirus-D68
To Be Published
7TAH
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Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain in complex with inhibitor 11526091 (no/low occupancy-no inhibitor modeled)
分子名称: viral protein 1, viral protein 2, viral protein 3, ...
著者Fu, J, Klose, T, Kuhn, R.J, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-12-20
公開日2023-01-25
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Isoxazole-3-Carboxamide Derivatives of Pleconaril Destabilize the Viral Capsid of Enterovirus-D68
To Be Published
7TAJ
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Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain in complex with inhibitor 11526093 (no/low occupancy-no inhibitor modeled)
分子名称: viral protein 1, viral protein 2, viral protein 3, ...
著者Fu, J, Klose, T, Kuhn, R.J, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-12-20
公開日2023-01-25
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2 Å)
主引用文献Isoxazole-3-Carboxamide Derivatives of Pleconaril Destabilize the Viral Capsid of Enterovirus-D68
To Be Published
7TAF
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Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain virion in complex with inhibitor 11526092
分子名称: N,N-dimethyl-5-(3-{2-methyl-4-[5-(trifluoromethyl)-1,2,4-oxadiazol-3-yl]phenoxy}propyl)-1,2-oxazole-3-carboxamide, viral protein 1, viral protein 2, ...
著者Fu, J, Klose, T, Kuhn, R.J, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-12-20
公開日2023-01-25
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2 Å)
主引用文献Isoxazole-3-Carboxamide Derivatives of Pleconaril Destabilize the Viral Capsid of Enterovirus-D68
To Be Published
7TAG
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Cryo-EM structure of Human Enterovirus D68 US/MO/14-18947 strain virion in complex with pleconaril
分子名称: 3-{3,5-DIMETHYL-4-[3-(3-METHYL-ISOXAZOL-5-YL)-PROPOXY]-PHENYL}-5-TRIFLUOROMETHYL-[1,2,4]OXADIAZOLE, viral protein 1, viral protein 2, ...
著者Fu, J, Klose, T, Kuhn, R.J, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-12-20
公開日2023-01-25
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Isoxazole-3-Carboxamide Derivatives of Pleconaril Destabilize the Viral Capsid of Enterovirus-D68
To Be Published
1YKS
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Crystal structure of yellow fever virus NS3 helicase
分子名称: Genome polyprotein [contains: Flavivirin protease NS3 catalytic subunit]
著者Wu, J, Bera, A.K, Kuhn, R.J, Smith, J.L.
登録日2005-01-18
公開日2005-08-23
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of the flavivirus helicase: implications for catalytic activity, protein interactions, and proteolytic processing.
J.Virol., 79, 2005
1Z7S
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The crystal structure of coxsackievirus A21
分子名称: CALCIUM ION, GUANOSINE-5'-MONOPHOSPHATE, Human COXSACKIEVIRUS A21, ...
著者Xiao, C, Bator-Kelly, C.M, Rieder, E, Chipman, P.R, Craig, A, Kuhn, R.J, Wimmer, E, Rossmann, M.G.
登録日2005-03-28
公開日2005-08-02
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The crystal structure of coxsackievirus a21 and its interaction with icam-1.
Structure, 13, 2005
1Z8Y
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Mapping the E2 Glycoprotein of Alphaviruses
分子名称: Capsid protein C, Spike glycoprotein E1, Spike glycoprotein E2
著者Mukhopadhyay, S, Zhang, W, Gabler, S, Chipman, P.R, Strauss, E.G, Strauss, J.H, Baker, T.S, Kuhn, R.J, Rossmann, M.G.
登録日2005-03-31
公開日2006-02-07
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Mapping the structure and function of the E1 and E2 glycoproteins in alphaviruses.
Structure, 14, 2006
7V0N
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Cryo-EM structure of SINV/EEEV in complex with Fab fragment of a moderately/weakly neutralizing human antibody IgG-21
分子名称: IgG 21 Fab heavy chain, IgG 21 Fab light chain, Spike glycoprotein E1, ...
著者Bandyopadhyay, A, Klose, T, Kuhn, R.J.
登録日2022-05-10
公開日2023-04-05
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (5.9 Å)
主引用文献Structural constraints link differences in neutralization potency of human anti-Eastern equine encephalitis virus monoclonal antibodies.
Proc.Natl.Acad.Sci.USA, 120, 2023

 

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