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PDB: 32 件

1ML8
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structural genomics
分子名称: hypothetical protein (crp region)
著者Korolev, S, Skarina, T, Joachimiak, A, Edwards, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2002-08-30
公開日2003-04-22
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural genomics
To be Published
7S4A
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MRG15 complex with PALB2 peptide
分子名称: Mortality factor 4-like protein 1, Partner and localizer of BRCA2
著者Korolev, S, Deveryshetty, J.
登録日2021-09-08
公開日2022-05-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.693 Å)
主引用文献Structural Insight into the Mechanism of PALB2 Interaction with MRG15.
Genes (Basel), 12, 2021
4X57
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Structure of an Arabidopsis E2 / Membrane-anchored Ubiquitin-fold Protein Complex
分子名称: Membrane-anchored ubiquitin-fold protein 3, SULFATE ION, Ubiquitin-conjugating enzyme E2 8
著者Korolev, S, Koroleva, O, Lu, X, Downes, B.
登録日2014-12-04
公開日2016-01-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of an Arabidopsis E2 / Membrane-anchored Ubiquitin-fold ProteinComplex
To Be Published
2O5V
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Recombination mediator RecF
分子名称: DNA replication and repair protein recF, SULFATE ION
著者Korolev, S, Koroleva, O.
登録日2006-12-06
公開日2007-02-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Structural conservation of RecF and Rad50: implications for DNA recognition and RecF function.
Embo J., 26, 2007
3LFU
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Crystal Structure of E. coli UvrD
分子名称: DNA helicase II, SULFATE ION
著者Korolev, S, Waksman, G, Lohman, T.M.
登録日2010-01-18
公開日2011-02-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Rotations of the 2B sub-domain of E. coli UvrD helicase/translocase coupled to nucleotide and DNA binding.
J.Mol.Biol., 411, 2011
8FZT
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SpCas9 with dual-guide RNA and target DNA
分子名称: CRISPR-associated endonuclease Cas9/Csn1, CrE2, E2-NTS, ...
著者Korolev, S, Gagnon, K.
登録日2023-01-30
公開日2023-05-31
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献SpCas9 with dual-guide RNA and target DNA
To Be Published
8G1I
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SpCas9 with sgRNA and target DNA
分子名称: CRISPR-associated endonuclease Cas9/Csn1, DNA E2_NTS, DNA E2_TS, ...
著者Korolev, S, Gagnon, K.
登録日2023-02-02
公開日2023-05-17
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献SpCas9 with sgRNA and target DNA
To Be Published
7N8K
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LINE-1 endonuclease domain complex with Mg
分子名称: ACETATE ION, LINE-1 retrotransposable element ORF2 protein, MAGNESIUM ION, ...
著者Korolev, S, Miller, I.
登録日2021-06-15
公開日2021-10-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structural dissection of sequence recognition and catalytic mechanism of human LINE-1 endonuclease.
Nucleic Acids Res., 49, 2021
7N8S
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LINE-1 endonuclease domain complex with DNA
分子名称: DNA (5'-D(*CP*CP*TP*TP*AP*AP*AP*AP*AP*GP*GP*AP*GP*CP*T)-3'), DNA (5'-D(*GP*CP*TP*CP*CP*TP*TP*TP*TP*TP*AP*AP*GP*GP*A)-3'), LINE-1 retrotransposable element ORF2 protein
著者Korolev, S, Miller, I.
登録日2021-06-15
公開日2021-10-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Structural dissection of sequence recognition and catalytic mechanism of human LINE-1 endonuclease.
Nucleic Acids Res., 49, 2021
7N94
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LINE-1 endonuclease domain complex with DNA
分子名称: DNA (5'-D(*AP*GP*CP*CP*CP*TP*TP*AP*AP*AP*AP*AP*GP*GP*AP*GP*CP*T)-3'), DNA (5'-D(*GP*CP*TP*CP*CP*TP*TP*TP*TP*TP*AP*AP*GP*GP*GP*CP*TP*A)-3'), LINE-1 retrotransposable element ORF2 protein
著者Korolev, S, Miller, I.
登録日2021-06-16
公開日2021-10-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural dissection of sequence recognition and catalytic mechanism of human LINE-1 endonuclease.
Nucleic Acids Res., 49, 2021
1NPY
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Structure of shikimate 5-dehydrogenase-like protein HI0607
分子名称: ACETYL GROUP, Hypothetical shikimate 5-dehydrogenase-like protein HI0607
著者Korolev, S, Koroleva, O, Zarembinski, T, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2003-01-20
公開日2003-07-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal Structure of a Novel Shikimate Dehydrogenase from Haemophilus influenzae.
J.Biol.Chem., 280, 2005
1UAA
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E. COLI REP HELICASE/DNA COMPLEX
分子名称: DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), PROTEIN (ATP-DEPENDENT DNA HELICASE REP.)
著者Korolev, S, Waksman, G.
登録日1997-06-30
公開日1998-07-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Major domain swiveling revealed by the crystal structures of complexes of E. coli Rep helicase bound to single-stranded DNA and ADP.
Cell(Cambridge,Mass.), 90, 1997
1K6D
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CRYSTAL STRUCTURE OF ACETATE COA-TRANSFERASE ALPHA SUBUNIT
分子名称: ACETATE COA-TRANSFERASE ALPHA SUBUNIT, MAGNESIUM ION
著者Korolev, S, Koroleva, O, Petterson, K, Collart, F, Dementieva, I, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2001-10-15
公開日2002-06-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Autotracing of Escherichia coli acetate CoA-transferase alpha-subunit structure using 3.4 A MAD and 1.9 A native data.
Acta Crystallogr.,Sect.D, 58, 2002
1JQ3
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Crystal Structure of Spermidine Synthase in Complex with Transition State Analogue AdoDATO
分子名称: S-ADENOSYL-1,8-DIAMINO-3-THIOOCTANE, Spermidine synthase
著者Korolev, S, Ikeguchi, Y, Skarina, T, Beasley, S, Edwards, A, Joachimiak, A, Pegg, A.E, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2001-08-03
公開日2001-11-21
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The crystal structure of spermidine synthase with a multisubstrate adduct inhibitor.
Nat.Struct.Biol., 9, 2002
1I36
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Structure of Conserved Protein MTH1747 of Unknown Function Reveals Structural Similarity with 3-Hydroxyacid Dehydrogenases
分子名称: CONSERVED HYPOTHETICAL PROTEIN MTH1747, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Korolev, S.V, Dementieva, I.S, Christendat, D, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2001-02-13
公開日2002-05-15
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献STRUCTURAL SIMILARITIES OF MTH1747 HYPOTHETICAL PROTEIN FROM METHANOBACTERIUM THERMOAUTOTROPHICUM WITH 3-HYDROXYACID DEHYDROGENASES
to be published
1KXJ
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The Crystal Structure of Glutamine Amidotransferase from Thermotoga maritima
分子名称: Amidotransferase hisH, PHOSPHATE ION
著者Korolev, S, Skarina, T, Evdokimova, E, Beasley, S, Edwards, A, Joachimiak, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2002-01-31
公開日2002-03-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of glutamine amidotransferase from Thermotoga maritima
Proteins, 49, 2002
1INL
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Crystal Structure of Spermidine Synthase from Thermotoga Maritima
分子名称: Spermidine synthase
著者Korolev, S, Skarina, T, Ikeguchi, Y, Pegg, A.E, Joachimiak, A, Edwards, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2001-05-14
公開日2001-11-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The crystal structure of spermidine synthase with a multisubstrate adduct inhibitor.
Nat.Struct.Biol., 9, 2002
1KTQ
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DNA POLYMERASE
分子名称: DNA POLYMERASE I
著者Korolev, S, Waksman, G.
登録日1995-08-16
公開日1996-11-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the large fragment of Thermus aquaticus DNA polymerase I at 2.5-A resolution: structural basis for thermostability.
Proc.Natl.Acad.Sci.USA, 92, 1995
6AUN
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BU of 6aun by Molmil
calcium-independent phospholipase A2 beta
分子名称: PLA2G6, iPLA2beta
著者Malley, K, Koroleva, O, Miller, I, Sanishvili, R, Jenkins, C.M, Gross, R.W, Korolev, S.
登録日2017-09-01
公開日2018-03-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.951 Å)
主引用文献The structure of iPLA2beta reveals dimeric active sites and suggests mechanisms of regulation and localization.
Nat Commun, 9, 2018
3Q8D
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E. coli RecO complex with SSB C-terminus
分子名称: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, D-MALATE, DNA repair protein recO, ...
著者Koroleva, O, Ryzhikov, M, Korolev, S.
登録日2011-01-06
公開日2011-05-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Mechanism of RecO recruitment to DNA by single-stranded DNA binding protein.
Nucleic Acids Res., 39, 2011
1U5K
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Recombinational repair protein RecO
分子名称: ZINC ION, hypothetical protein
著者Makharashvili, N, Koroleva, O, Bera, S, Grandgenett, D.P, Korolev, S.
登録日2004-07-27
公開日2004-10-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A Novel Structure of DNA Repair Protein RecO from Deinococcus radiodurans
STRUCTURE, 12, 2004
1FGU
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SSDNA-BINDING DOMAIN OF THE LARGE SUBUNIT OF REPLICATION PROTEIN A
分子名称: REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT
著者Bochkareva, E, Belegu, V, Korolev, S, Bochkarev, A.
登録日2000-07-28
公開日2001-02-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of the major single-stranded DNA-binding domain of replication protein A suggests a dynamic mechanism for DNA binding.
EMBO J., 20, 2001
5KTQ
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LARGE FRAGMENT OF TAQ DNA POLYMERASE BOUND TO DCTP
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, PROTEIN (DNA POLYMERASE I)
著者Li, Y, Kong, Y, Korolev, S, Waksman, G.
登録日1998-09-22
公開日1998-09-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of the Klenow fragment of Thermus aquaticus DNA polymerase I complexed with deoxyribonucleoside triphosphates.
Protein Sci., 7, 1998
3ULP
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Plasmodium falciparum SSB complex with ssDNA
分子名称: DNA (35-MER), Single-strand binding protein
著者Antony, E, Lohman, T.M, Korolev, S.
登録日2011-11-11
公開日2012-05-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Plasmodium falciparum SSB Tetramer Wraps Single-Stranded DNA with Similar Topology but Opposite Polarity to E. coli SSB.
J.Mol.Biol., 420, 2012
1YMP
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The Crystal Structure of a Partial Mouse Notch-1 Ankyrin Domain: Repeats 4 Through 7 Preserve an Ankyrin Fold
分子名称: Notch 1 protein
著者Lubman, O.Y, Kopan, R, Waksman, G, Korolev, S.
登録日2005-01-21
公開日2005-05-10
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The crystal structure of a partial mouse Notch-1 ankyrin domain: repeats 4 through 7 preserve an ankyrin fold.
Protein Sci., 14, 2005

 

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