Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 444 results

2CAV
DownloadVisualize
BU of 2cav by Molmil
CANAVALIN FROM JACK BEAN
Descriptor: PROTEIN (CANAVALIN)
Authors:Ko, T.-P, Day, J, Macpherson, A.
Deposit date:1998-11-20
Release date:1998-11-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:The refined structure of canavalin from jack bean in two crystal forms at 2.1 and 2.0 A resolution.
Acta Crystallogr.,Sect.D, 56, 2000
5B0M
DownloadVisualize
BU of 5b0m by Molmil
Structure of MoeN5-Sso7d fusion protein in complex with beta-dodecyl maltoside
Descriptor: DODECYL-BETA-D-MALTOSIDE, MoeN5,DNA-binding protein 7d
Authors:Ko, T.-P, Zhang, L, Chen, C.-C, Guo, R.-T, Oldfield, E.O.
Deposit date:2015-11-02
Release date:2016-03-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Moenomycin Biosynthesis: Structure and Mechanism of Action of the Prenyltransferase MoeN5.
Angew.Chem.Int.Ed.Engl., 55, 2016
5B0J
DownloadVisualize
BU of 5b0j by Molmil
Structure of MoeN5-Sso7d fusion protein in complex with beta-undecyl maltoside
Descriptor: MoeN5,DNA-binding protein 7d, UNDECYL-MALTOSIDE
Authors:Ko, T.-P, Zhang, L, Chen, C.-C, Guo, R.-T, Oldfield, E.O.
Deposit date:2015-10-30
Release date:2016-03-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Moenomycin Biosynthesis: Structure and Mechanism of Action of the Prenyltransferase MoeN5.
Angew.Chem.Int.Ed.Engl., 55, 2016
7BR2
DownloadVisualize
BU of 7br2 by Molmil
BT4096 a gut microbial diltiazem-metabolizing enzyme
Descriptor: Lipolytic enzyme, G-D-S-L family
Authors:Ko, T.-P, Chen, C.-C, Guo, R.-T.
Deposit date:2020-03-26
Release date:2020-05-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Structure of a gut microbial diltiazem-metabolizing enzyme suggests possible substrate binding mode.
Biochem.Biophys.Res.Commun., 527, 2020
1UCS
DownloadVisualize
BU of 1ucs by Molmil
Type III Antifreeze Protein RD1 from an Antarctic Eel Pout
Descriptor: Antifreeze peptide RD1
Authors:Ko, T.-P, Robinson, H, Gao, Y.-G, Cheng, C.-H.C, DeVries, A.L, Wang, A.H.-J.
Deposit date:2003-04-21
Release date:2003-05-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (0.62 Å)
Cite:The refined crystal structure of an eel pout type III antifreeze protein RD1 at 0.62-A resolution reveals structural microheterogeneity of protein and solvation.
Biophys.J., 84, 2003
5CUV
DownloadVisualize
BU of 5cuv by Molmil
Crystal structure of Trypanosoma cruzi Vacuolar Soluble Pyrophosphatases in apo form
Descriptor: Acidocalcisomal pyrophosphatase, D-MALATE, MAGNESIUM ION
Authors:Ko, T.P, Yang, Y.Y, Liu, W.D, Zheng, Y.Y, Chen, C.C, Guo, R.T.
Deposit date:2015-07-25
Release date:2016-03-02
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Crystal structure of Trypanosoma cruzi protein in complex with ligand
Acs Chem.Biol., 2016
4BLC
DownloadVisualize
BU of 4blc by Molmil
THE STRUCTURE OF ORTHORHOMBIC CRYSTALS OF BEEF LIVER CATALASE
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTEIN (CATALASE), PROTOPORPHYRIN IX CONTAINING FE
Authors:Ko, T.P, Day, J, Malkin, A, McPherson, A.
Deposit date:1998-09-27
Release date:1998-10-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of orthorhombic crystals of beef liver catalase.
Acta Crystallogr.,Sect.D, 55, 1999
1JP3
DownloadVisualize
BU of 1jp3 by Molmil
Structure of E.coli undecaprenyl pyrophosphate synthase
Descriptor: 2-(2-{2-[2-(2-{2-[2-(2-{2-[4-(1,1,3,3-TETRAMETHYL-BUTYL)-PHENOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, undecaprenyl pyrophosphate synthase
Authors:Ko, T.P, Chen, Y.K, Robinson, H, Tsai, P.C, Gao, Y.G, Chen, A.P.C, Wang, A.H.J, Liang, P.H.
Deposit date:2001-07-31
Release date:2001-08-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mechanism of product chain length determination and the role of a flexible loop in Escherichia coli undecaprenyl-pyrophosphate synthase catalysis.
J.Biol.Chem., 276, 2001
7EBL
DownloadVisualize
BU of 7ebl by Molmil
Bacterial STING in complex with c-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), STING
Authors:Ko, T.-P, Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
Deposit date:2021-03-10
Release date:2021-09-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Crystal structure and functional implication of bacterial STING.
Nat Commun, 13, 2022
7EBD
DownloadVisualize
BU of 7ebd by Molmil
Bacterial STING in complex with c-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), ACETATE ION, TIR-like domain-containing protein
Authors:Ko, T.-P, Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
Deposit date:2021-03-09
Release date:2021-09-15
Last modified:2022-01-19
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure and functional implication of bacterial STING.
Nat Commun, 13, 2022
6JCN
DownloadVisualize
BU of 6jcn by Molmil
Yeast dehydrodolichyl diphosphate synthase complex subunit NUS1
Descriptor: Dehydrodolichyl diphosphate synthase complex subunit NUS1, SULFATE ION
Authors:Ko, T.-P, Ma, J, Liu, W, Chen, C.-C, Guo, R.-T.
Deposit date:2019-01-29
Release date:2019-06-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:Structural insights to heterodimeric cis-prenyltransferases through yeast dehydrodolichyl diphosphate synthase subunit Nus1.
Biochem.Biophys.Res.Commun., 515, 2019
1QQW
DownloadVisualize
BU of 1qqw by Molmil
CRYSTAL STRUCTURE OF HUMAN ERYTHROCYTE CATALASE
Descriptor: CATALASE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ko, T.P, Safo, M.K, Musayev, F.N, Wang, C, Wu, S.H, Abraham, D.J.
Deposit date:1999-06-09
Release date:1999-06-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure of human erythrocyte catalase.
Acta Crystallogr.,Sect.D, 56, 2000
6KV9
DownloadVisualize
BU of 6kv9 by Molmil
MoeE5 in complex with UDP-glucuronic acid and NAD
Descriptor: MoeE5, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, URIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID
Authors:Ko, T.-P, Liu, W, Sun, H, Liu, W, Chen, C.-C, Guo, R.-T.
Deposit date:2019-09-03
Release date:2019-11-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structure of an antibiotic-synthesizing UDP-glucuronate 4-epimerase MoeE5 in complex with substrate.
Biochem.Biophys.Res.Commun., 521, 2020
7CEI
DownloadVisualize
BU of 7cei by Molmil
THE ENDONUCLEASE DOMAIN OF COLICIN E7 IN COMPLEX WITH ITS INHIBITOR IM7 PROTEIN
Descriptor: PROTEIN (COLICIN E7 IMMUNITY PROTEIN), ZINC ION
Authors:Ko, T.P, Liao, C.C, Ku, W.Y, Chak, K.F, Yuan, H.S.
Deposit date:1998-09-17
Release date:1999-09-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of the DNase domain of colicin E7 in complex with its inhibitor Im7 protein.
Structure Fold.Des., 7, 1999
1UNK
DownloadVisualize
BU of 1unk by Molmil
STRUCTURE OF COLICIN E7 IMMUNITY PROTEIN
Descriptor: COLICIN E7
Authors:Ko, T.-P, Hsieh, S.-Y, Ku, W.-Y, Tseng, M.-Y, Chak, K.-F, Yuan, H.S.
Deposit date:1996-06-21
Release date:1998-01-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A novel role of ImmE7 in the autoregulatory expression of the ColE7 operon and identification of possible RNase active sites in the crystal structure of dimeric ImmE7.
EMBO J., 16, 1997
1WD0
DownloadVisualize
BU of 1wd0 by Molmil
Crystal structures of the hyperthermophilic chromosomal protein Sac7d in complex with DNA decamers
Descriptor: 5'-D(*CP*CP*TP*AP*TP*AP*TP*AP*GP*G)-3', DNA-binding proteins 7a/7b/7d
Authors:Ko, T.-P, Chu, H.-M, Chen, C.-Y, Chou, C.-C, Wang, A.H.-J.
Deposit date:2004-05-10
Release date:2004-08-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of the hyperthermophilic chromosomal protein Sac7d in complex with DNA decamers.
Acta Crystallogr.,Sect.D, 60, 2004
1WD1
DownloadVisualize
BU of 1wd1 by Molmil
Crystal structures of the hyperthermophilic chromosomal protein Sac7d in complex with DNA decamers
Descriptor: 5'-D(*CP*CP*TP*AP*CP*GP*TP*AP*GP*G)-3', DNA-binding proteins 7a/7b/7d
Authors:Ko, T.-P, Chu, H.-M, Chen, C.-Y, Chou, C.-C, Wang, A.H.-J.
Deposit date:2004-05-10
Release date:2004-08-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of the hyperthermophilic chromosomal protein Sac7d in complex with DNA decamers.
Acta Crystallogr.,Sect.D, 60, 2004
5YI6
DownloadVisualize
BU of 5yi6 by Molmil
CRISPR associated protein Cas6
Descriptor: CRISPR-associated endoribonuclease Cas6 1, GLYCEROL, PHOSPHATE ION
Authors:Ko, T.P, Hsieh, T.J, Chen, Y.
Deposit date:2017-10-03
Release date:2018-09-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.852 Å)
Cite:Expression, Purification, Crystallization, and X-ray Structural Analysis of CRISPR-Associated Protein Cas6 from Methanocaldococcus jannaschii
Crystals, 7, 2018
5GWW
DownloadVisualize
BU of 5gww by Molmil
Structure of MoeN5-Sso7d fusion protein in complex with a permethylated substrate analogue
Descriptor: MoeN5,DNA-binding protein 7d, methyl (2R)-3-dimethoxyphosphoryloxy-2-[(2Z,6E)-3,7,11-trimethyldodeca-2,6,10-trienoxy]propanoate
Authors:Ko, T.-P, Guo, R.-T, Chen, C.-C.
Deposit date:2016-09-14
Release date:2017-09-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Complex structures of MoeN5 with substrate analogues suggest sequential catalytic mechanism.
Biochem. Biophys. Res. Commun., 511, 2019
5GWV
DownloadVisualize
BU of 5gwv by Molmil
Structure of MoeN5-Sso7d fusion protein in complex with a substrate analogue
Descriptor: (2R)-3-dimethoxyphosphoryloxy-2-[(2Z,6E)-3,7,11-trimethyldodeca-2,6,10-trienoxy]propanoic acid, MoeN5,DNA-binding protein 7d
Authors:Ko, T.-P, Guo, R.-T, Chen, C.-C.
Deposit date:2016-09-14
Release date:2017-09-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Complex structures of MoeN5 with substrate analogues suggest sequential catalytic mechanism.
Biochem. Biophys. Res. Commun., 511, 2019
5XK9
DownloadVisualize
BU of 5xk9 by Molmil
Crystal structure of Isosesquilavandulyl Diphosphate Synthase from Streptomyces sp. strain CNH-189 in complex with GSPP and DMAPP
Descriptor: DIMETHYLALLYL DIPHOSPHATE, GERANYL S-THIOLODIPHOSPHATE, MAGNESIUM ION, ...
Authors:Ko, T.P, Guo, R.T, Liu, W, Chen, C.C, Gao, J.
Deposit date:2017-05-05
Release date:2018-01-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.137 Å)
Cite:"Head-to-Middle" and "Head-to-Tail" cis-Prenyl Transferases: Structure of Isosesquilavandulyl Diphosphate Synthase.
Angew. Chem. Int. Ed. Engl., 57, 2018
5XK7
DownloadVisualize
BU of 5xk7 by Molmil
Crystal structure of Isosesquilavandulyl Diphosphate Synthase from Streptomyces sp. strain CNH-189 in complex with DMAPP
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DIMETHYLALLYL DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Ko, T.P, Guo, R.T, Liu, W, Chen, C.C, Gao, J.
Deposit date:2017-05-05
Release date:2018-01-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.911 Å)
Cite:"Head-to-Middle" and "Head-to-Tail" cis-Prenyl Transferases: Structure of Isosesquilavandulyl Diphosphate Synthase.
Angew. Chem. Int. Ed. Engl., 57, 2018
3LBM
DownloadVisualize
BU of 3lbm by Molmil
D-sialic acid aldolase
Descriptor: N-acetylneuraminate lyase, SULFATE ION
Authors:Ko, T.-P, Chou, C.-Y, Wang, A.H.-J.
Deposit date:2010-01-08
Release date:2011-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Modulation of substrate specificities of D-sialic acid aldolase through single mutations of Val251
To be Published
6IME
DownloadVisualize
BU of 6ime by Molmil
Rv2361c complex with substrate analogues
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 3-methylbut-3-enylsulfanyl(phosphonooxy)phosphinic acid, CARBONATE ION, ...
Authors:Ko, T.-P, Guo, R.-T, Chen, C.-C, Liu, W.
Deposit date:2018-10-22
Release date:2019-09-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Substrate-analogue complex structure of Mycobacterium tuberculosis decaprenyl diphosphate synthase.
Acta Crystallogr.,Sect.F, 75, 2019
6J8W
DownloadVisualize
BU of 6j8w by Molmil
Structure of MOEN5-SSO7D fusion protein in complex with lig 1
Descriptor: (2S)-3-dimethoxyphosphoryloxy-2-[(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trienoxy]propanoic acid, MoeN5,DNA-binding protein 7d
Authors:Ko, T.P, Zhang, L.L, Chen, C.C, Guo, R.T.
Deposit date:2019-01-21
Release date:2019-04-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Complex structures of MoeN5 with substrate analogues suggest sequential catalytic mechanism.
Biochem. Biophys. Res. Commun., 511, 2019

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon