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PDB: 68 results

4WZ9
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BU of 4wz9 by Molmil
APN1 from Anopheles gambiae
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, AGAP004809-PA, ALA-ALA-ALA-LYS-ALA, ...
Authors:Atkinson, S.C, Armistead, J.S, Mathias, D.K, Sandeu, M.M, Tao, D, Borhani-Dizaji, N, Morlais, I, Dinglasan, R.R, Borg, N.A.
Deposit date:2014-11-19
Release date:2015-06-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:The Anopheles-midgut APN1 structure reveals a new malaria transmission-blocking vaccine epitope.
Nat.Struct.Mol.Biol., 22, 2015
3A5F
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High-resolution structure of DHDPS from Clostridium botulinum in complex with pyruvate
Descriptor: Dihydrodipicolinate synthase, GLYCEROL
Authors:Atkinson, S.C, Dobson, R.C.J, Perugini, M.A.
Deposit date:2009-08-06
Release date:2010-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:The high resolution structure of DHDPS from Clostridium botulinum
To be Published
4I7W
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Agrobacterium tumefaciens DHDPS with lysine and pyruvate
Descriptor: Dihydrodipicolinate synthase, GLYCEROL, LYSINE
Authors:Atkinson, S.C, Dogovski, C, Dobson, R.C.J, Perugini, M.A.
Deposit date:2012-12-01
Release date:2013-12-04
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure, function and allostery of the bona fide DHDPS from the plant pathogen Agrobacterium tumefaciens
To be Published
4I7V
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Agrobacterium tumefaciens DHDPS with pyruvate
Descriptor: Dihydrodipicolinate synthase
Authors:Atkinson, S.C, Dogovski, C, Dobson, R.C.J, Perugini, M.A.
Deposit date:2012-12-01
Release date:2013-12-04
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure, function and allostery of the bona fide DHDPS from the plant pathogen Agrobacterium tumefaciens
To be Published
4I7U
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BU of 4i7u by Molmil
Dihydrodipicolinate Synthase of Agrobacterium tumefaciens
Descriptor: Dihydrodipicolinate synthase, GLYCEROL
Authors:Atkinson, S.C, Dogovski, C, Dobson, R.C.J, Perugini, M.A.
Deposit date:2012-11-30
Release date:2013-12-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure, function and allostery of the bona fide DHDPS from the plant pathogen Agrobacterium tumefaciens
To be Published
1U78
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BU of 1u78 by Molmil
Structure of the bipartite DNA-binding domain of Tc3 transposase bound to transposon DNA
Descriptor: 26-MER, transposable element tc3 transposase
Authors:Watkins, S, van Pouderoyen, G, Sixma, T.K.
Deposit date:2004-08-03
Release date:2004-08-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structural analysis of the bipartite DNA-binding domain of Tc3 transposase bound to transposon DNA
Nucleic Acids Res., 32, 2004
4HNN
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Dihydrodipicolinate Synthase from the common grapevine with pyruvate and lysine
Descriptor: Dihydrodipicolinate synthase, LYSINE
Authors:Atkinson, S.C, Dobson, R.C.J, Perugini, M.A.
Deposit date:2012-10-19
Release date:2013-09-04
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural, kinetic and computational investigation of Vitis vinifera DHDPS reveals new insight into the mechanism of lysine-mediated allosteric inhibition.
Plant Mol.Biol., 81, 2013
3ZNN
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IN VITRO AND IN VIVO INHIBITION OF HUMAN D-AMINO ACID OXIDASE: REGULATION OF D-SERINE CONCENTRATION IN THE BRAIN
Descriptor: 4H-THIENO[3,2-B]PYROLE-5-CARBOXYLIC ACID, D-AMINO-ACID OXIDASE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Hopkins, S.C, Heffernan, M.L.R, Saraswat, L.D, Bowen, C.A, Melnick, L, Hardy, L.W, Orsini, M.A, Allen, M.S, Koch, P, Spear, K.L, Foglesong, R.J, Soukri, M, Chytil, M, Fang, Q.K, Jones, S.W, Varney, M.A, Panatier, A, Oliet, S.H.R, Pollegioni, L, Piubelli, L, Molla, G, Nardini, M, Large, T.H.
Deposit date:2013-02-15
Release date:2013-05-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural, Kinetic, and Pharmacodynamic Mechanisms of D-Amino Acid Oxidase Inhibition by Small Molecules.
J.Med.Chem., 56, 2013
3ZNP
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IN VITRO AND IN VIVO INHIBITION OF HUMAN D-AMINO ACID OXIDASE: REGULATION OF D-SERINE CONCENTRATION IN THE BRAIN
Descriptor: 3-HYDROXY-2H-CHROMEN-2-ONE, D-AMINO-ACID OXIDASE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Hopkins, S.C, Heffernan, M.L.R, Saraswat, L.D, Bowen, C.A, Melnick, L, Hardy, L.W, Orsini, M.A, Allen, M.S, Koch, P, Spear, K.L, Foglesong, R.J, Soukri, M, Chytil, M, Fang, Q.K, Jones, S.W, Varney, M.A, Panatier, A, Oliet, S.H.R, Pollegioni, L, Piubelli, L, Molla, G, Nardini, M, Large, T.H.
Deposit date:2013-02-15
Release date:2013-05-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural, Kinetic, and Pharmacodynamic Mechanisms of D-Amino Acid Oxidase Inhibition by Small Molecules.
J.Med.Chem., 56, 2013
3ZNO
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BU of 3zno by Molmil
IN VITRO AND IN VIVO INHIBITION OF HUMAN D-AMINO ACID OXIDASE: REGULATION OF D-SERINE CONCENTRATION IN THE BRAIN
Descriptor: 4-(4-chlorophenethyl)-1H-pyrrole-2-carboxylic acid, D-AMINO-ACID OXIDASE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Hopkins, S.C, Heffernan, M.L.R, Saraswat, L.D, Bowen, C.A, Melnick, L, Hardy, L.W, Orsini, M.A, Allen, M.S, Koch, P, Spear, K.L, Foglesong, R.J, Soukri, M, Chytil, M, Fang, Q.K, Jones, S.W, Varney, M.A, Panatier, A, Oliet, S.H.R, Pollegioni, L, Piubelli, L, Molla, G, Nardini, M, Large, T.H.
Deposit date:2013-02-15
Release date:2013-05-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural, Kinetic, and Pharmacodynamic Mechanisms of D-Amino Acid Oxidase Inhibition by Small Molecules.
J.Med.Chem., 56, 2013
3ZNQ
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BU of 3znq by Molmil
IN VITRO AND IN VIVO INHIBITION OF HUMAN D-AMINO ACID OXIDASE: REGULATION OF D-SERINE CONCENTRATION IN THE BRAIN
Descriptor: 3-PHENETHYL-4H-FURO[3,2-B]PYRROLE-5-CARBOXYLIC ACID, D-AMINO-ACID OXIDASE, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Hopkins, S.C, Heffernan, M.L.R, Saraswat, L.D, Bowen, C.A, Melnick, L, Hardy, L.W, Orsini, M.A, Allen, M.S, Koch, P, Spear, K.L, Foglesong, R.J, Soukri, M, Chytil, M, Fang, Q.K, Jones, S.W, Varney, M.A, Panatier, A, Oliet, S.H.R, Pollegioni, L, Piubelli, L, Molla, G, Nardini, M, Large, T.H.
Deposit date:2013-02-15
Release date:2013-05-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural, Kinetic, and Pharmacodynamic Mechanisms of D-Amino Acid Oxidase Inhibition by Small Molecules.
J.Med.Chem., 56, 2013
2RCJ
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BU of 2rcj by Molmil
Solution structure of human Immunoglobulin M
Descriptor: IgA1 heavy chain, IgA1 light chain, J chain
Authors:Perkins, S.J, Nealis, A.S, Sutton, B.J, Feinstein, A.
Deposit date:2007-09-20
Release date:2008-01-22
Last modified:2024-02-21
Method:SOLUTION SCATTERING
Cite:Solution structure of human and mouse immunoglobulin M by synchrotron X-ray scattering and molecular graphics modelling. A possible mechanism for complement activation.
J.Mol.Biol., 221, 1991
5NQH
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BU of 5nqh by Molmil
Structure of the human Fe65-PTB2 homodimer
Descriptor: Amyloid beta A4 precursor protein-binding family B member 1, GLYCEROL, SULFATE ION
Authors:Feilen, L.P, Haubrich, K, Sinning, I, Konietzko, U, Kins, S, Simon, B, Wild, K.
Deposit date:2017-04-20
Release date:2017-05-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Fe65-PTB2 Dimerization Mimics Fe65-APP Interaction.
Front Mol Neurosci, 10, 2017
4JFN
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BU of 4jfn by Molmil
Crystal structure of the N-terminal, growth factor-like domain of the amyloid precursor protein bound to copper
Descriptor: Amyloid beta A4 protein, COPPER (II) ION, GLYCEROL
Authors:Wild, K, Baumkotter, F, Kins, S.
Deposit date:2013-02-28
Release date:2014-07-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Amyloid precursor protein dimerization and synaptogenic function depend on copper binding to the growth factor-like domain
J.Neurosci., 34, 2014
1IGA
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BU of 1iga by Molmil
MODEL OF HUMAN IGA1 DETERMINED BY SOLUTION SCATTERING CURVE-FITTING AND HOMOLOGY MODELLING
Descriptor: IGA1
Authors:Boehm, M.K, Woof, J.M, Kerr, M.A, Perkins, S.J.
Deposit date:1998-12-23
Release date:1999-06-15
Last modified:2024-02-07
Method:SOLUTION SCATTERING
Cite:The Fab and Fc fragments of IgA1 exhibit a different arrangement from that in IgG: a study by X-ray and neutron solution scattering and homology modelling.
J.Mol.Biol., 286, 1999
1E07
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BU of 1e07 by Molmil
Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data
Descriptor: CARCINOEMBRYONIC ANTIGEN
Authors:Boehm, M.K, Perkins, S.J.
Deposit date:2000-03-11
Release date:2000-07-04
Last modified:2024-05-08
Method:SOLUTION SCATTERING
Cite:Structural models for carcinoembryonic antigen and its complex with the single-chain Fv antibody molecule MFE23.
Febs Lett., 475, 2000
2W40
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BU of 2w40 by Molmil
Crystal structure of Plasmodium falciparum glycerol kinase with bound glycerol
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, GLYCEROL KINASE, ...
Authors:Schnick, C, Polley, S.D, Fivelman, Q.L, Ranford-Cartwright, L, Wilkinson, S.R, Brannigan, J.A, Wilkinson, A.J, Baker, D.A.
Deposit date:2008-11-18
Release date:2008-12-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structure and Non-Essential Function of Glycerol Kinase in Plasmodium Falciparum Blood Stages.
Mol.Microbiol., 71, 2009
2Z75
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BU of 2z75 by Molmil
T. tengcongensis glmS ribozyme bound to glucosamine-6-phosphate
Descriptor: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, glmS ribozyme RNA, ...
Authors:Klein, D.J, Wilkinson, S.R, Been, M.D, Ferre-D'Amare, A.R.
Deposit date:2007-08-15
Release date:2007-09-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Requirement of helix P2.2 and nucleotide G1 for positioning the cleavage site and cofactor of the glmS ribozyme
J.Mol.Biol., 373, 2007
2Z74
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BU of 2z74 by Molmil
T. tengcongensis glmS ribozyme bound to glucose-6-phosphate
Descriptor: 6-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, glmS ribozyme RNA, ...
Authors:Klein, D.J, Wilkinson, S.R, Been, M.D, Ferre-D'Amare, A.R.
Deposit date:2007-08-15
Release date:2007-09-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Requirement of helix P2.2 and nucleotide G1 for positioning the cleavage site and cofactor of the glmS ribozyme
J.Mol.Biol., 373, 2007
2W41
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BU of 2w41 by Molmil
Crystal structure of Plasmodium falciparum glycerol kinase with ADP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL KINASE, ...
Authors:Schnick, C, Polley, S.D, Fivelman, Q.L, Ranford-Cartwright, L, Wilkinson, S.R, Brannigan, J.A, Wilkinson, A.J, Baker, D.A.
Deposit date:2008-11-18
Release date:2008-12-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Structure and Non-Essential Function of Glycerol Kinase in Plasmodium Falciparum Blood Stages.
Mol.Microbiol., 71, 2009
5CKQ
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BU of 5ckq by Molmil
CUB1-EGF-CUB2 domains of rat MASP-1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Mannan-binding lectin serine protease 1, ...
Authors:Nan, R, Furze, C.M, Wright, D.W, Gor, J, Wallis, R, Perkins, S.J.
Deposit date:2015-07-15
Release date:2017-01-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.704 Å)
Cite:Flexibility in Mannan-Binding Lectin-Associated Serine Proteases-1 and -2 Provides Insight on Lectin Pathway Activation.
Structure, 25, 2017
5CIS
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BU of 5cis by Molmil
The CUB1-EGF-CUB2 domains of rat MBL-associated serine protease-2 (MASP-2) bound to Ca2+
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Mannan-binding lectin serine peptidase 2
Authors:Nan, R, Furze, C.M, Wright, D.W, Gor, J, Wallis, R, Perkins, S.J.
Deposit date:2015-07-13
Release date:2017-01-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Flexibility in Mannan-Binding Lectin-Associated Serine Proteases-1 and -2 Provides Insight on Lectin Pathway Activation.
Structure, 25, 2017
5CKM
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BU of 5ckm by Molmil
The CUB1-EGF-CUB2 domains of rat MBL-associated serine protease-2 (MASP-2) bound to Ca2+
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Mannan-binding lectin serine peptidase 2
Authors:Nan, R, Furze, C.M, Wright, D.W, Gor, J, Wallis, R, Perkins, S.J.
Deposit date:2015-07-15
Release date:2017-01-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Flexibility in Mannan-Binding Lectin-Associated Serine Proteases-1 and -2 Provides Insight on Lectin Pathway Activation.
Structure, 25, 2017
5CKN
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BU of 5ckn by Molmil
The CUB1-EGF-CUB2 domains of rat MBL-associated serine protease-2 (MASP-2) bound to Ca2+
Descriptor: CALCIUM ION, Mannan-binding lectin serine peptidase 2
Authors:Nan, R, Furze, C.M, Wright, D.W, Gor, J, Wallis, R, Perkins, S.J.
Deposit date:2015-07-15
Release date:2017-01-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Flexibility in Mannan-Binding Lectin-Associated Serine Proteases-1 and -2 Provides Insight on Lectin Pathway Activation.
Structure, 25, 2017
5G2N
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BU of 5g2n by Molmil
X-ray structure of PI3Kinase Gamma in complex with Copanlisib
Descriptor: 2-azanyl-~{N}-[7-methoxy-8-(3-morpholin-4-ylpropoxy)-2,3-dihydroimidazo[1,2-c]quinazolin-5-yl]pyrimidine-5-carboxamide, PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE 3-KINASE CATALYTIC SUBUNIT GAMMA ISOFORM, SULFATE ION
Authors:Schaefer, M, Scott, W.J, Hentemann, M.F, Rowley, R.B, Bull, C.O, Jenkins, S, Bullion, A.M, Johnson, J, Redman, A, Robbins, A.H, Esler, W, Fracasso, R.P, Garrison, T, Hamilton, M, Michels, M, Wood, J.E, Wilkie, D.P, Xiao, H, Levy, J, Liu, N, Stasik, E, Brands, M, Lefranc, J.
Deposit date:2016-04-11
Release date:2016-04-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Discovery and Sar of Novel 2,3-Dihydroimidazo(1,2-C)Quinazoline Pi3K Inhibitors: Identification of Copanlisib (Bay 80-6946)
Chemmedchem, 11, 2016

 

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