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PDB: 41 件

2AQB
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Structure-activity relationships at the 5-position of thiolactomycin: an intact 5(R)-isoprene unit is required for activity against the condensing enzymes from Mycobacterium tuberculosis and Escherchia coli
分子名称: (5R)-5-[(1E)-BUTA-1,3-DIENYL]-4-HYDROXY-3,5-DIMETHYLTHIOPHEN-2(5H)-ONE, 3-oxoacyl-[acyl-carrier-protein] synthase I
著者Kim, P, Zhang, Y.M, Shenoy, G, Nguyen, Q.A, Boshoff, H.I, Manjunatha, U.H, Goodwin, M.B, Lonsdale, J, Price, A.C, Miller, D.J.
登録日2005-08-17
公開日2006-01-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Structure-Activity Relationships at the 5-Position of Thiolactomycin: An Intact (5R)-Isoprene Unit Is Required for Activity against the Condensing Enzymes from Mycobacterium tuberculosis and Escherichia coli
J.Med.Chem., 49, 2006
2AQ7
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Structure-activity relationships at the 5-posiiton of thiolactomycin: an intact 5(R)-isoprene unit is required for activity against the condensing enzymes from Mycobacterium tuberculosis and Escherichia coli
分子名称: (5R)-4-HYDROXY-3,5-DIMETHYL-5-[(1E,3E)-2-METHYLPENTA-1,3-DIENYL]THIOPHEN-2(5H)-ONE, 3-oxoacyl-[acyl-carrier-protein] synthase I
著者Kim, P, Zhang, Y.M, Shenoy, G, Nguyen, Q.A, Boshoff, H.I, Manjunatha, U.H, Goodwin, M.B, Lonsdale, J, Price, A.C, Miller, D.J.
登録日2005-08-17
公開日2006-01-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure-Activity Relationships at the 5-Position of Thiolactomycin: An Intact (5R)-Isoprene Unit Is Required for Activity against the Condensing Enzymes from Mycobacterium tuberculosis and Escherichia coli
J.Med.Chem., 49, 2006
1Q68
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Solution structure of T-cell surface glycoprotein CD4 and Proto-oncogene tyrosine-protein kinase LCK fragments
分子名称: Proto-oncogene tyrosine-protein kinase LCK, T-cell surface glycoprotein CD4, ZINC ION
著者Kim, P.W, Sun, Z.Y, Blacklow, S.C, Wagner, G, Eck, M.J.
登録日2003-08-12
公開日2003-11-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A zinc clasp structure tethers Lck to T cell coreceptors CD4 and CD8.
Science, 301, 2003
1Q69
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Solution structure of T-cell surface glycoprotein CD8 alpha chain and Proto-oncogene tyrosine-protein kinase LCK fragments
分子名称: Proto-oncogene tyrosine-protein kinase LCK, T-cell surface glycoprotein CD8 alpha chain, ZINC ION
著者Kim, P.W, Sun, Z.Y, Blacklow, S.C, Wagner, G, Eck, M.J.
登録日2003-08-12
公開日2003-11-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A zinc clasp structure tethers Lck to T cell coreceptors CD4 and CD8.
Science, 301, 2003
2C0Z
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The 1.6 A resolution crystal structure of NovW: a 4-keto-6-deoxy sugar epimerase from the novobiocin biosynthetic gene cluster of Streptomyces spheroides
分子名称: 1,2-ETHANEDIOL, NOVW, SULFATE ION
著者Jakimowicz, P, Tello, M, Freel-Meyers, C.L, Walsh, C.T, Buttner, M.J, Field, R.A, Lawson, D.M.
登録日2005-09-09
公開日2006-01-25
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The 1.6 A Resolution Crystal Structure of Novw: A 4-Keto-6-Deoxy Sugar Epimerase from the Novobiocin Biosynthetic Gene Cluster of Streptomyces Spheroides
Proteins, 63, 2006
1AJJ
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LDL RECEPTOR LIGAND-BINDING MODULE 5, CALCIUM-COORDINATING
分子名称: CALCIUM ION, LOW-DENSITY LIPOPROTEIN RECEPTOR, SULFATE ION
著者Fass, D, Blacklow, S.C, Kim, P.S, Berger, J.M.
登録日1997-05-04
公開日1997-07-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Molecular basis of familial hypercholesterolaemia from structure of LDL receptor module.
Nature, 388, 1997
1TGG
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RH3 DESIGNED RIGHT-HANDED COILED COIL TRIMER
分子名称: CHLORIDE ION, NICKEL (II) ION, right-handed coiled coil trimer
著者Plecs, J.J, Harbury, P.B, Kim, P.S, Alber, T.
登録日2004-05-28
公開日2004-10-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural test of the parameterized-backbone method for protein design
J.Mol.Biol., 342, 2004
1K1F
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Structure of the Bcr-Abl Oncoprotein Oligomerization domain
分子名称: BREAKPOINT CLUSTER REGION PROTEIN
著者Zhao, X, Ghaffari, S, Lodish, H, Malashkevich, V.N, Kim, P.S.
登録日2001-09-25
公開日2002-02-06
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of the Bcr-Abl oncoprotein oligomerization domain.
Nat.Struct.Biol., 9, 2002
2ZTA
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X-RAY STRUCTURE OF THE GCN4 LEUCINE ZIPPER, A TWO-STRANDED, PARALLEL COILED COIL
分子名称: GCN4 LEUCINE ZIPPER
著者O'Shea, E.K, Klemm, J.D, Kim, P.S, Alber, T.
登録日1991-07-05
公開日1992-10-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray structure of the GCN4 leucine zipper, a two-stranded, parallel coiled coil.
Science, 254, 1991
1GCM
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GCN4 LEUCINE ZIPPER CORE MUTANT P-LI
分子名称: GCN4P-II
著者Harbury, P.B, Kim, P.S, Alber, T.
登録日1995-04-25
公開日1996-01-29
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of an isoleucine-zipper trimer.
Nature, 371, 1994
2Q5U
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Crystal structure of IQN17
分子名称: CHLORIDE ION, Fusion protein between yeast variant GCN4 and HIVgp41
著者Malashkevich, V.N, Eckert, D.M, Hong, L.H, Kim, P.S.
登録日2007-06-01
公開日2007-06-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Inhibiting HIV Entry: Discovery of D-Peptide Inhibitors that Target the Gp41 Coiled-Coil Pocket
Cell(Cambridge,Mass.), 99, 1999
2Q3I
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Crystal structure of the D10-P3/IQN17 complex: a D-peptide inhibitor of HIV-1 entry bound to the GP41 coiled-coil pocket
分子名称: CHLORIDE ION, D-peptide, Fusion protein between the Coiled-Coil pocket of HIV GP41 and gcn4-PIQI
著者Malashkevich, V.N, Eckert, D.M, Hong, L.H, Carr, P.A, Kim, P.S.
登録日2007-05-30
公開日2007-06-12
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Inhibiting HIV Entry: Discovery of D-Peptide Inhibitors that Target the Gp41 Coiled-Coil Pocket
Cell(Cambridge,Mass.), 99, 1999
2Q7C
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Crystal structure of IQN17
分子名称: CHLORIDE ION, fusion protein between yeast variant GCN4 and HIVgp41
著者Malashkevich, V.N, Eckert, D.M, Hong, L.H, Kim, P.S.
登録日2007-06-06
公開日2007-06-19
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Inhibiting HIV Entry: Discovery of D-Peptide Inhibitors that Target the Gp41 Coiled-Coil Pocket
Cell(Cambridge,Mass.), 99, 1999
6UMV
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Human apo PD-1 double mutant
分子名称: CHLORIDE ION, Programmed cell death protein 1
著者Tang, S, Kim, P.S.
登録日2019-10-10
公開日2019-11-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.424 Å)
主引用文献A high-affinity human PD-1/PD-L2 complex informs avenues for small-molecule immune checkpoint drug discovery.
Proc.Natl.Acad.Sci.USA, 116, 2019
6UMT
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High-affinity human PD-1 PD-L2 complex
分子名称: MAGNESIUM ION, Programmed cell death 1 ligand 2, Programmed cell death protein 1
著者Tang, S, Kim, P.S.
登録日2019-10-10
公開日2019-11-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.986 Å)
主引用文献A high-affinity human PD-1/PD-L2 complex informs avenues for small-molecule immune checkpoint drug discovery.
Proc.Natl.Acad.Sci.USA, 116, 2019
1GCL
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GCN4 LEUCINE ZIPPER CORE MUTANT P-LI
分子名称: GCN4
著者Harbury, P.B, Zhang, T, Kim, P.S, Alber, T.
登録日1993-10-20
公開日1995-06-03
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A switch between two-, three-, and four-stranded coiled coils in GCN4 leucine zipper mutants.
Science, 262, 1993
6UMU
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Human apo PD-1 triple mutant
分子名称: CHLORIDE ION, Programmed cell death protein 1
著者Tang, S, Kim, P.S.
登録日2019-10-10
公開日2019-11-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.183 Å)
主引用文献A high-affinity human PD-1/PD-L2 complex informs avenues for small-molecule immune checkpoint drug discovery.
Proc.Natl.Acad.Sci.USA, 116, 2019
8F3B
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HIV-1 gp41 coiled-coil pocket IQN22
分子名称: IQN22
著者Bruun, T.U.J, Tang, S, Fernandez, D, Kim, P.S.
登録日2022-11-09
公開日2023-03-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-guided stabilization improves the ability of the HIV-1 gp41 hydrophobic pocket to elicit neutralizing antibodies.
J.Biol.Chem., 299, 2023
1IJ1
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GCN4-pVLT Coiled-coil Trimer with Threonine at the d(12) Position
分子名称: GENERAL CONTROL PROTEIN GCN4, ZINC ION
著者Akey, D.L, Malashkevich, V.N, Kim, P.S.
登録日2001-04-24
公開日2001-08-08
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Buried polar residues in coiled-coil interfaces.
Biochemistry, 40, 2001
8F3A
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HIV-1 gp41 coiled-coil pocket IQN17
分子名称: ACETIC ACID, CHLORIDE ION, IQN17
著者Bruun, T.U.J, Tang, S, Fernandez, D, Kim, P.S.
登録日2022-11-09
公開日2023-03-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structure-guided stabilization improves the ability of the HIV-1 gp41 hydrophobic pocket to elicit neutralizing antibodies.
J.Biol.Chem., 299, 2023
1JEK
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Visna TM CORE STRUCTURE
分子名称: ENV POLYPROTEIN
著者Malashkevich, V.N, Singh, M, Kim, P.S.
登録日2001-06-18
公開日2001-07-25
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The trimer-of-hairpins motif in membrane fusion: Visna virus.
Proc.Natl.Acad.Sci.USA, 98, 2001
2EBO
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CORE STRUCTURE OF GP2 FROM EBOLA VIRUS
分子名称: CHLORIDE ION, EBOLA VIRUS ENVELOPE GLYCOPROTEIN
著者Malashkevich, V.N, Schneider, B.J, Mcnally, M.L, Milhollen, M.A, Pang, J.X, Kim, P.S.
登録日1998-12-24
公開日1999-05-18
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Core structure of the envelope glycoprotein GP2 from Ebola virus at 1.9-A resolution.
Proc.Natl.Acad.Sci.USA, 96, 1999
7UX0
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Human Sperm TMEM95 Ectodomain
分子名称: Sperm-egg fusion protein TMEM95, TRIETHYLENE GLYCOL, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
著者Tang, S, Kim, P.S.
登録日2022-05-04
公開日2022-10-12
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Human sperm TMEM95 binds eggs and facilitates membrane fusion.
Proc.Natl.Acad.Sci.USA, 119, 2022
2SIV
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SIV GP41 CORE STRUCTURE
分子名称: SIV GP41 GLYCOPROTEIN
著者Malashkevich, V.N, Chan, D.C, Chutkowski, C.T, Kim, P.S.
登録日1998-06-17
公開日1998-08-19
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the simian immunodeficiency virus (SIV) gp41 core: conserved helical interactions underlie the broad inhibitory activity of gp41 peptides.
Proc.Natl.Acad.Sci.USA, 95, 1998
1CZQ
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CRYSTAL STRUCTURE OF THE D10-P1/IQN17 COMPLEX: A D-PEPTIDE INHIBITOR OF HIV-1 ENTRY BOUND TO THE GP41 COILED-COIL POCKET.
分子名称: CHLORIDE ION, D-PEPTIDE INHIBITOR, FUSION PROTEIN BETWEEN THE HYDROPHOBIC POCKET OF HIV GP41 AND GCN4-PIQI
著者Eckert, D.M, Malashkevich, V.N, Hong, L.H, Carr, P.A, Kim, P.S.
登録日1999-09-06
公開日1999-10-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Inhibiting HIV-1 entry: discovery of D-peptide inhibitors that target the gp41 coiled-coil pocket.
Cell(Cambridge,Mass.), 99, 1999

 

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