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PDB: 610 results

8JZH
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BU of 8jzh by Molmil
C. glutamicum S-adenosylmethionine synthase
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, S-adenosylmethionine synthase, ...
Authors:Lee, S, Kim, K.J.
Deposit date:2023-07-05
Release date:2023-10-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and Biochemical Studies on Product Inhibition of S-Adenosylmethionine Synthetase from Corynebacterium glutamicum .
J.Agric.Food Chem., 71, 2023
7LML
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BU of 7lml by Molmil
Receptor for Advanced Glycation End Products VC1 domain in complex with 3-(3-(((3-(4-Carboxyphenoxy)benzyl)oxy)methyl)phenyl)-1H-indole-2-carboxylic acid
Descriptor: 6-iodanyl-1~{H}-indole-2-carboxylic acid, ACETATE ION, Advanced glycosylation end product-specific receptor, ...
Authors:Salay, L.E, Kozlyuk, N, Gilston, B.A, Gogliotti, R.D, Christov, P.P, Kim, K, Ovee, M, Waterson, A.G, Chazin, W.J.
Deposit date:2021-02-05
Release date:2021-12-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A fragment-based approach to discovery of Receptor for Advanced Glycation End products inhibitors.
Proteins, 89, 2021
2PL2
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BU of 2pl2 by Molmil
Crystal structure of TTC0263: a thermophilic TPR protein in Thermus thermophilus HB27
Descriptor: Hypothetical conserved protein TTC0263
Authors:Lim, H, Kim, K, Han, D, Oh, J.
Deposit date:2007-04-18
Release date:2008-03-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of TTC0263, a thermophilic TPR protein from Thermus thermophilus HB27.
Mol.Cell, 24, 2007
6LKS
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BU of 6lks by Molmil
Effects of zinc ion on oligomerization and pH stability of influenza virus hemagglutinin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Seok, J, Kim, K.
Deposit date:2019-12-20
Release date:2020-10-21
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.24 Å)
Cite:Divalent cation-induced conformational changes of influenza virus hemagglutinin.
Sci Rep, 10, 2020
1R2G
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BU of 1r2g by Molmil
Human Bcl-XL containing a Phe to Trp mutation at position 97
Descriptor: Apoptosis regulator Bcl-X
Authors:O'Neill, J.W, Manion, M.K, Giedt, C.D, Kim, K.M, Zhang, K.Y, Hockenbery, D.M.
Deposit date:2003-09-26
Release date:2004-02-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Bcl-XL mutations suppress cellular sensitivity to antimycin A.
J.Biol.Chem., 279, 2004
5WQ3
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BU of 5wq3 by Molmil
Crystal structure of type-II LOG from Corynebacterium glutamicum
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Cytokinin riboside 5'-monophosphate phosphoribohydrolase, ...
Authors:Seo, H, Kim, K.-J.
Deposit date:2016-11-22
Release date:2017-04-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for a novel type of cytokinin-activating protein
Sci Rep, 7, 2017
5W7X
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BU of 5w7x by Molmil
Crystal Structure of FHA domain of human APLF in complex with XRCC1 bisphospho peptide
Descriptor: Aprataxin and PNK-like factor, DNA repair protein XRCC1
Authors:Pedersen, L.C, Kim, K, London, R.E.
Deposit date:2017-06-21
Release date:2018-05-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.005 Å)
Cite:Characterization of the APLF FHA-XRCC1 phosphopeptide interaction and its structural and functional implications.
Nucleic Acids Res., 45, 2017
4R3R
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BU of 4r3r by Molmil
Crystal structures of EGFR in complex with Mig6
Descriptor: Epidermal growth factor receptor, peptide from ERBB receptor feedback inhibitor 1'
Authors:Park, E, Kim, N, Yi, Z, Cho, A, Kim, K, Ficarro, S.B, Park, A, Park, W.Y, Murray, B, Meyerson, M, Beroukim, R, Marto, J.A, Cho, J, Eck, M.J.
Deposit date:2014-08-17
Release date:2015-08-12
Last modified:2015-09-16
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structure and mechanism of activity-based inhibition of the EGF receptor by Mig6.
Nat.Struct.Mol.Biol., 22, 2015
1R5H
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BU of 1r5h by Molmil
Crystal Structure of MetAP2 complexed with A320282
Descriptor: MANGANESE (II) ION, Methionine aminopeptidase 2, N'-(2S,3R)-3-AMINO-4-CYCLOHEXYL-2-HYDROXY-BUTANO-N-(4-METHYLPHENYL)HYDRAZIDE
Authors:Sheppard, G.S, Wang, J, Kawai, M, BaMaung, N.Y, Craig, R.A, Erickson, S.A, Lynch, L, Patel, J, Yang, F, Searle, X.B, Lou, P, Park, C, Kim, K.H, Henkin, J, Lesniewski, R.
Deposit date:2003-10-10
Release date:2004-10-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:3-Amino-2-hydroxyamides and related compounds as inhibitors of methionine aminopeptidase-2.
Bioorg.Med.Chem.Lett., 14, 2004
1R58
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BU of 1r58 by Molmil
Crystal Structure of MetAP2 complexed with A357300
Descriptor: MANGANESE (II) ION, Methionine aminopeptidase 2, N'-((2S,3R)-3-AMINO-2-HYDROXY-5-(ISOPROPYLSULFANYL)PENTANOYL)-N-3-CHLOROBENZOYL HYDRAZIDE
Authors:Sheppard, G.S, Wang, J, Kawai, M, BaMaung, N.Y, Craig, R.A, Ericken, S.A, Lynch, L, Patel, J, Yang, F, Searle, X.B, Lou, P, Park, C, Kim, K.H, Henkin, J, Lesniewski, R.
Deposit date:2003-10-09
Release date:2004-10-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:3-Amino-2-hydroxyamides and related compounds as inhibitors of methionine aminopeptidase-2.
Bioorg.Med.Chem.Lett., 14, 2004
2QI2
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BU of 2qi2 by Molmil
Crystal structure of the Thermoplasma acidophilum Pelota protein
Descriptor: Cell division protein pelota related protein
Authors:Lee, H.H, Kim, Y.S, Kim, K.H, Heo, I.H, Kim, S.K, Kim, O, Suh, S.W.
Deposit date:2007-07-03
Release date:2007-10-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and functional insights into dom34, a key component of no-go mRNA decay
Mol.Cell, 27, 2007
4WYR
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BU of 4wyr by Molmil
Crystal structure of thiolase mutation (V77Q,N153Y,A286K) from Clostridium acetobutylicum
Descriptor: Acetyl-CoA acetyltransferase, DI(HYDROXYETHYL)ETHER, GLYCEROL
Authors:Kim, S, Ha, S.C, Ahn, J.W, Kim, E.J, Lim, J.H, Kim, K.J.
Deposit date:2014-11-18
Release date:2015-10-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Redox-switch regulatory mechanism of thiolase from Clostridium acetobutylicum
Nat Commun, 6, 2015
4XL4
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BU of 4xl4 by Molmil
Crystal structure of thiolase from Clostridium acetobutylicum in complex with CoA
Descriptor: Acetyl-CoA acetyltransferase, COENZYME A, GLYCEROL
Authors:Kim, S, Ha, S.C, Ahn, J.W, Kim, E.J, Lim, J.H, Kim, K.J.
Deposit date:2015-01-13
Release date:2015-10-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Redox-switch regulatory mechanism of thiolase from Clostridium acetobutylicum
Nat Commun, 6, 2015
4XL2
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BU of 4xl2 by Molmil
Crystal structure of oxidized form of thiolase from Clostridium acetobutylicum
Descriptor: ACETATE ION, Acetyl-CoA acetyltransferase, DI(HYDROXYETHYL)ETHER, ...
Authors:Kim, S, Ha, S.C, Ahn, J.W, Kim, E.J, Lim, J.H, Kim, K.J.
Deposit date:2015-01-13
Release date:2015-10-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Redox-switch regulatory mechanism of thiolase from Clostridium acetobutylicum
Nat Commun, 6, 2015
7C1C
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BU of 7c1c by Molmil
Crystal structure of FumaraseC from Mannheimia succiniciproducens
Descriptor: Fumarate hydratase class II, GLYCEROL
Authors:Kim, B, Lee, S.H, Kim, K.-J.
Deposit date:2020-05-02
Release date:2021-05-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and Biochemical analysis of FumaraseC from Mannheimia succiniciproducens
To Be Published
7C1A
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BU of 7c1a by Molmil
Crystal structure of FumaraseC (S319C) from Mannheimia succiniciproducens in complex with malate
Descriptor: (2S)-2-hydroxybutanedioic acid, Fumarate hydratase class II
Authors:Kim, B, Lee, S.H, Kim, K.-J.
Deposit date:2020-05-02
Release date:2021-05-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.144 Å)
Cite:Structural and Biochemical analysis of FumaraseC from Mannheimia succiniciproducens
To Be Published
5ITS
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BU of 5its by Molmil
Crystal structure of LOG from Corynebacterium glutamicum
Descriptor: Cytokinin riboside 5'-monophosphate phosphoribohydrolase, GLYCEROL, PHOSPHATE ION
Authors:Seo, H.-G, Kim, K.-J.
Deposit date:2016-03-17
Release date:2016-08-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for cytokinin production by LOG from Corynebacterium glutamicum
Sci Rep, 6, 2016
5M47
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BU of 5m47 by Molmil
Crystal structure of DapF from Corynebacterium glutamicum in complex with D,L-diaminopimelate
Descriptor: 2,6-DIAMINOPIMELIC ACID, Diaminopimelate epimerase
Authors:Sagong, H.-Y, Kim, K.-J.
Deposit date:2016-10-18
Release date:2016-11-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structural basis for redox sensitivity in Corynebacterium glutamicum diaminopimelate epimerase: an enzyme involved in l-lysine biosynthesis.
Sci Rep, 7, 2017
4XL3
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BU of 4xl3 by Molmil
Crystal structure of reduced form of thiolase from Clostridium acetobutylicum
Descriptor: Acetyl-CoA acetyltransferase, GLYCEROL
Authors:Kim, S, Ha, S.C, Ahn, J.W, Kim, E.J, Lim, J.H, Kim, K.J.
Deposit date:2015-01-13
Release date:2015-10-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Redox-switch regulatory mechanism of thiolase from Clostridium acetobutylicum
Nat Commun, 6, 2015
5JIA
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BU of 5jia by Molmil
The Crystal Structure Of IUS-SPRY Domain From RanBP10
Descriptor: IMIDAZOLE, Ran-binding protein 10
Authors:Hong, S.K, Kim, K.-H, Kim, E.E.
Deposit date:2016-04-22
Release date:2016-11-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for the Interaction between the IUS-SPRY Domain of RanBPM and DDX-4 in Germ Cell Development.
J.Mol.Biol., 428, 2016
4R1N
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BU of 4r1n by Molmil
Crystal structure of (S)-3-hydroxybutylryl-CoA dehydrogenase form the n-butanol sysnthesizing bacterium, Clostridium butyricum.
Descriptor: 3-hydroxybutyryl-CoA dehydrogenase
Authors:Kim, E.J, Kim, S.W, Kim, K.J.
Deposit date:2014-08-07
Release date:2015-07-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of (S)-3-hydroxybutyryl-CoA dehydrogenase from Clostridium butyricum and its mutations that enhance reaction kinetics
J MICROBIOL BIOTECHNOL., 24, 2014
4WYS
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BU of 4wys by Molmil
Crystal structure of thiolase from Escherichia coli
Descriptor: Acetyl-CoA acetyltransferase
Authors:Kim, S, Ha, S.C, Ahn, J.W, Kim, E.J, Lim, J.H, Kim, K.J.
Deposit date:2014-11-18
Release date:2015-10-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Redox-switch regulatory mechanism of thiolase from Clostridium acetobutylicum
Nat Commun, 6, 2015
7C18
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BU of 7c18 by Molmil
Crystal structure of FumaraseC from Mannheimia succiniciproducens in complex with Fumarate
Descriptor: FUMARIC ACID, Fumarate hydratase class II
Authors:Kim, B, Lee, S.H, Kim, K.-J.
Deposit date:2020-05-02
Release date:2021-05-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Structural studies reveal the molecular mechanism of isocitrate lyase from Chloroflexus aurantiacus
To Be Published
5JI7
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BU of 5ji7 by Molmil
The Crystal Structure Of IUS-SPRY Domain From RanBPM/9
Descriptor: Ran-binding protein 9
Authors:Hong, S.K, Kim, K.-H, Kim, E.E.
Deposit date:2016-04-22
Release date:2016-11-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structural Basis for the Interaction between the IUS-SPRY Domain of RanBPM and DDX-4 in Germ Cell Development.
J.Mol.Biol., 428, 2016
5JI9
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BU of 5ji9 by Molmil
The Crystal Structure Of IUS-SPRY Domain From RanBPM/9
Descriptor: Ran-binding protein 9
Authors:Hong, S.K, Kim, K.-H, Kim, E.E.
Deposit date:2016-04-22
Release date:2016-11-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for the Interaction between the IUS-SPRY Domain of RanBPM and DDX-4 in Germ Cell Development.
J.Mol.Biol., 428, 2016

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