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PDB: 132 results

7FEP
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BU of 7fep by Molmil
Cryo-EM structure of BsClpP-ADEP1 complex at pH 6.5
Descriptor: ADEP1, ATP-dependent Clp protease proteolytic subunit
Authors:Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K.
Deposit date:2021-07-21
Release date:2022-07-06
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
7FER
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BU of 7fer by Molmil
Cryo-EM structure of BsClpP-ADEP1 complex at pH 4.2
Descriptor: ADEP1, ATP-dependent Clp protease proteolytic subunit
Authors:Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K.
Deposit date:2021-07-21
Release date:2022-07-06
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
7FES
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BU of 7fes by Molmil
Cryo-EM structure of apo BsClpP at pH 4.2
Descriptor: ATP-dependent Clp protease proteolytic subunit
Authors:Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K.
Deposit date:2021-07-21
Release date:2022-07-06
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
7FEQ
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BU of 7feq by Molmil
Cryo-EM structure of apo BsClpP at pH 6.5
Descriptor: ATP-dependent Clp protease proteolytic subunit
Authors:Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K.
Deposit date:2021-07-21
Release date:2022-07-06
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
1Y4U
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BU of 1y4u by Molmil
Conformation rearrangement of heat shock protein 90 upon ADP binding
Descriptor: Chaperone protein htpG
Authors:Huai, Q, Wang, H, Liu, Y, Kim, H, Toft, D, Ke, H.
Deposit date:2004-12-01
Release date:2005-04-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of the N-terminal and middle domains of E. coli Hsp90 and conformation changes upon ADP binding.
Structure, 13, 2005
1Y4S
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BU of 1y4s by Molmil
Conformation rearrangement of heat shock protein 90 upon ADP binding
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein htpG, MAGNESIUM ION
Authors:Huai, Q, Wang, H, Liu, Y, Kim, H, Toft, D, Ke, H.
Deposit date:2004-12-01
Release date:2005-04-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of the N-terminal and middle domains of E. coli Hsp90 and conformation changes upon ADP binding.
Structure, 13, 2005
1A77
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BU of 1a77 by Molmil
FLAP ENDONUCLEASE-1 FROM METHANOCOCCUS JANNASCHII
Descriptor: FLAP ENDONUCLEASE-1 PROTEIN, MAGNESIUM ION
Authors:Hwang, K.Y, Baek, K, Kim, H, Cho, Y.
Deposit date:1998-03-20
Release date:1999-08-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of flap endonuclease-1 from Methanococcus jannaschii.
Nat.Struct.Biol., 5, 1998
1A76
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BU of 1a76 by Molmil
FLAP ENDONUCLEASE-1 FROM METHANOCOCCUS JANNASCHII
Descriptor: FLAP ENDONUCLEASE-1 PROTEIN, MANGANESE (II) ION
Authors:Hwang, K.Y, Baek, K, Kim, H, Cho, Y.
Deposit date:1998-03-20
Release date:1999-08-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of flap endonuclease-1 from Methanococcus jannaschii.
Nat.Struct.Biol., 5, 1998
4JJT
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BU of 4jjt by Molmil
The crystal structure of enoyl-CoA hydratase from Mycobacterium tuberculosis H37Rv
Descriptor: ACETATE ION, Enoyl-CoA hydratase, GLYCEROL
Authors:Tan, K, Holowicki, J, Endres, M, Kim, C.-Y, Kim, H, Hung, L.-W, Terwilliger, T.C, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
Deposit date:2013-03-08
Release date:2013-03-27
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.496 Å)
Cite:The crystal structure of enoyl-CoA hydratase from Mycobacterium tuberculosis H37Rv
To be Published
6KRT
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BU of 6krt by Molmil
monodehydroascorbate reductase, MDHAR, from Antarctic hairgrass Deschampsia antarctica
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, monodehydroascorbate reductase
Authors:Park, A.K, Do, H, Lee, J.H, Kim, H, Choi, W, Kim, I.S, Kim, H.W.
Deposit date:2019-08-22
Release date:2020-08-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:monodehydroascorbate reductase, MDHAR, from Antarctic hairgrass Deschampsia antarctica
To Be Published
5V7I
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BU of 5v7i by Molmil
Crystal structure of homo sapiens serine hydroxymethyltransferase 2 (mitochondrial) (SHMT2), in complex with glycine, PLP and folate-competitive pyrazolopyran inhibitor: 6-amino-4-isopropyl-3-methyl-4-(3-(pyrrolidin-1-yl)-5-(trifluoromethyl)phenyl)-1,4-dihydropyrano[2,3-c]pyrazole-5-carbonitrile
Descriptor: (4R)-6-amino-3-methyl-4-(propan-2-yl)-4-[3-(pyrrolidin-1-yl)-5-(trifluoromethyl)phenyl]-1,4-dihydropyrano[2,3-c]pyrazole-5-carbonitrile, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Ducker, G.S, Ghergurovich, J.M, Mainolfi, N, Suri, V, Jeong, S, Friedman, A, Manfredi, M, Kim, H, Rabinowitz, J.D.
Deposit date:2017-03-20
Release date:2017-10-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Human SHMT inhibitors reveal defective glycine import as a targetable metabolic vulnerability of diffuse large B-cell lymphoma.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4GCV
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BU of 4gcv by Molmil
Structure of a Putative transcription factor (PA1374)from Pseudomonas aeruginosa
Descriptor: GLYCEROL, PHOSPHATE ION, Putative transcription protein, ...
Authors:Choe, J, Kim, H.
Deposit date:2012-07-31
Release date:2013-07-24
Last modified:2013-07-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The X-ray crystal structure of PA1374 from Pseudomonas aeruginosa, a putative oxidative-stress sensing transcriptional regulator.
Biochem.Biophys.Res.Commun., 431, 2013
2AD5
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BU of 2ad5 by Molmil
Mechanisms of feedback regulation and drug resistance of CTP synthetases: structure of the E. coli CTPS/CTP complex at 2.8-Angstrom resolution.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CTP synthase, CYTIDINE-5'-TRIPHOSPHATE, ...
Authors:Endrizzi, J.A, Kim, H, Anderson, P.M, Baldwin, E.P.
Deposit date:2005-07-19
Release date:2005-11-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mechanisms of Product Feedback Regulation and Drug Resistance in Cytidine Triphosphate Synthetases from the Structure of a CTP-Inhibited Complex(,).
Biochemistry, 44, 2005
3P28
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BU of 3p28 by Molmil
Structure of a Circular Permutant of Green Fluorescent Protein
Descriptor: Green fluorescent protein
Authors:Melief, E.H, Kim, H, Kim, T.S, Wachter, R.M, Tonge, P.J.
Deposit date:2010-10-01
Release date:2011-10-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Construction and Characterization of a Stable Circular Permutant of Green Fluorescent Protein
To be Published
4ZG0
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BU of 4zg0 by Molmil
Crystal structure of Mouse Syndesmos protein
Descriptor: Protein syndesmos
Authors:Lee, I, Kim, H, Yoo, J, Cho, H, Lee, W.
Deposit date:2015-04-22
Release date:2016-04-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.006 Å)
Cite:Crystal structure of syndesmos and its interaction with Syndecan-4 proteoglycan
Biochem.Biophys.Res.Commun., 463, 2015
5X9Q
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BU of 5x9q by Molmil
Crystal structure of HldC from Burkholderia pseudomallei
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Putative cytidylyltransferase
Authors:Park, J, Kim, H, Kim, S, Lee, D, Shin, D.H.
Deposit date:2017-03-08
Release date:2017-12-27
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of D-glycero-Beta-D-manno-heptose-1-phosphate adenylyltransferase from Burkholderia pseudomallei.
Proteins, 86, 2018
5G1D
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BU of 5g1d by Molmil
The complex structure of syntenin-1 PDZ domain with c-terminal extension
Descriptor: SYNDECAN-4, SYNTENIN-1
Authors:Lee, I, Kim, H, Yun, J.H, Lee, W.
Deposit date:2016-03-25
Release date:2016-11-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:New Structural Insight of C-Terminal Region of Syntenin-1, Enhancing the Molecular Dimerization and Inhibitory Function Related on Syndecan-4 Signaling.
Sci.Rep., 6, 2016
5G1E
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BU of 5g1e by Molmil
The complex structure of syntenin-1 PDZ domain with c-terminal extension
Descriptor: SYNTENIN-1
Authors:Lee, I, Kim, H, Yun, J.H, Lee, W.
Deposit date:2016-03-25
Release date:2016-11-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:New Structural Insight of C-Terminal Region of Syntenin-1, Enhancing the Molecular Dimerization and Inhibitory Function Related on Syndecan-4 Signaling.
Sci.Rep., 6, 2016
2KEF
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BU of 2kef by Molmil
Solution NMR structures of human hepcidin at 325K
Descriptor: Hepcidin
Authors:Jordan, J.B, Poppe, L, Hainu, M, Arvedson, T, Syed, R, Li, V, Kohno, H, Kim, H, Miranda, L.P, Cheetham, J, Sasu, B.J.
Deposit date:2009-01-29
Release date:2009-06-23
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Hepcidin revisited, disulfide connectivity, dynamics, and structure.
J.Biol.Chem., 284, 2009
7V8V
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BU of 7v8v by Molmil
Crystal structure of PsEst3 S128A mutant
Descriptor: esterase
Authors:Son, J, Kim, H, Kim, H.W.
Deposit date:2021-08-23
Release date:2022-08-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and biochemical insights into PsEst3, a new GHSR-type esterase obtained from Paenibacillus sp. R4.
Iucrj, 10, 2023
7V8W
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BU of 7v8w by Molmil
Crystal structure of PsEst3 S128A variant complexed with malonate
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, MALONIC ACID, ...
Authors:Son, J, Kim, H, Kim, H.W.
Deposit date:2021-08-23
Release date:2022-08-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and biochemical insights into PsEst3, a new GHSR-type esterase obtained from Paenibacillus sp. R4.
Iucrj, 10, 2023
7V8X
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BU of 7v8x by Molmil
Crystal structure of PsEst3 complexed with Phenylmethylsulfonyl fluoride (PMSF)
Descriptor: esterase, phenylmethanesulfonic acid
Authors:Son, J, Kim, H, Kim, H.W.
Deposit date:2021-08-23
Release date:2022-08-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structural and biochemical insights into PsEst3, a new GHSR-type esterase obtained from Paenibacillus sp. R4.
Iucrj, 10, 2023
7V8U
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BU of 7v8u by Molmil
Crystal structure of PsEst3 wild-type
Descriptor: Esterase, NITROBENZENE, SULFATE ION
Authors:Son, J, Kim, H, Kim, H.W.
Deposit date:2021-08-23
Release date:2022-08-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural and biochemical insights into PsEst3, a new GHSR-type esterase obtained from Paenibacillus sp. R4.
Iucrj, 10, 2023
5XHW
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BU of 5xhw by Molmil
Crystal structure of HddC from Yersinia pseudotuberculosis
Descriptor: Putative 6-deoxy-D-mannoheptose pathway protein, SULFATE ION
Authors:Park, J, Kim, H, Kim, S, Shin, D.H.
Deposit date:2017-04-24
Release date:2018-04-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of d-glycero-alpha-d-manno-heptose-1-phosphate guanylyltransferase from Yersinia pseudotuberculosis.
Biochim. Biophys. Acta, 1866, 2018
5XF2
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BU of 5xf2 by Molmil
Crystal structure of SeMet-HldC from Burkholderia pseudomallei
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Putative cytidylyltransferase
Authors:Park, J, Kim, H, Kim, S, Lee, D, Shin, D.H.
Deposit date:2017-04-07
Release date:2017-07-19
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Expression and crystallographic studies of D-glycero-beta-D-manno-heptose-1-phosphate adenylyltransferase from Burkholderia pseudomallei
Acta Crystallogr F Struct Biol Commun, 73, 2017

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