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PDB: 128 results

2AZV
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Solution structure of the T22G mutant of N-terminal SH3 domain of DRK (calculated without NOEs)
Descriptor: SH2-SH3 adapter protein drk
Authors:Bezsonova, I, Singer, A.U, Choy, W.-Y, Tollinger, M, Forman-Kay, J.D.
Deposit date:2005-09-12
Release date:2005-12-13
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural Comparison of the Unstable drkN SH3 Domain and a Stable Mutant
Biochemistry, 44, 2005
2A36
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Solution structure of the N-terminal SH3 domain of DRK
Descriptor: Protein E(sev)2B
Authors:Forman-Kay, J.D, Bezsonova, I, Singer, A, Choy, W.-Y, Tollinger, M.
Deposit date:2005-06-23
Release date:2005-12-13
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural Comparison of the Unstable drkN SH3 Domain and a Stable Mutant
Biochemistry, 44, 2005
1I5H
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SOLUTION STRUCTURE OF THE RNEDD4 WWIII DOMAIN-RENAL BP2 PEPTIDE COMPLEX
Descriptor: AMILORIDE-SENSITIVE SODIUM CHANNEL BETA-SUBUNIT, UBIQUITIN LIGASE NEDD4
Authors:Kanelis, V, Rotin, D, Forman-Kay, J.D.
Deposit date:2001-02-27
Release date:2001-05-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of a Nedd4 WW domain-ENaC peptide complex.
Nat.Struct.Biol., 8, 2001
2NMB
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DNUMB PTB DOMAIN COMPLEXED WITH A PHOSPHOTYROSINE PEPTIDE, NMR, ENSEMBLE OF STRUCTURES.
Descriptor: PROTEIN (GPPY PEPTIDE), PROTEIN (NUMB PROTEIN)
Authors:Li, S.-C, Zwahlen, C, Vincent, S.J.F, McGlade, C.J, Pawson, T, Forman-Kay, J.D.
Deposit date:1998-10-29
Release date:1998-11-04
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Structure of a Numb PTB domain-peptide complex suggests a basis for diverse binding specificity.
Nat.Struct.Biol., 5, 1998
1FMU
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BU of 1fmu by Molmil
STRUCTURE OF NATIVE PROTEINASE A IN P3221 SPACE GROUP.
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, SACCHAROPEPSIN, ...
Authors:Gustchina, A, Li, M, Phylip, L.H, Lees, W.E, Kay, J, Wlodawer, A.
Deposit date:2000-08-18
Release date:2002-07-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:An unusual orientation for Tyr75 in the active site of the aspartic proteinase from Saccharomyces cerevisiae.
Biochem.Biophys.Res.Commun., 295, 2002
1G0V
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THE STRUCTURE OF PROTEINASE A COMPLEXED WITH A IA3 MUTANT, MVV
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PROTEASE A INHIBITOR 3, PROTEINASE A, ...
Authors:Phylip, L.H, Lees, W, Brownsey, B.G, Bur, D, Dunn, B.M, Winther, J, Gustchina, A, Li, M, Copeland, T, Wlodawer, A, Kay, J.
Deposit date:2000-10-09
Release date:2001-04-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:The potency and specificity of the interaction between the IA3 inhibitor and its target aspartic proteinase from Saccharomyces cerevisiae.
J.Biol.Chem., 276, 2001
1FMX
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BU of 1fmx by Molmil
STRUCTURE OF NATIVE PROTEINASE A IN THE SPACE GROUP P21
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SACCHAROPEPSIN, ...
Authors:Gustchina, A, Li, M, Phylip, L.H, Lees, W.E, Kay, J, Wlodawer, A.
Deposit date:2000-08-18
Release date:2002-07-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:An unusual orientation for Tyr75 in the active site of the aspartic proteinase from Saccharomyces cerevisiae.
Biochem.Biophys.Res.Commun., 295, 2002
1DPJ
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THE STRUCTURE OF PROTEINASE A COMPLEXED WITH IA3 PEPTIDE INHIBITOR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PROTEINASE A, PROTEINASE INHIBITOR IA3 PEPTIDE, ...
Authors:Li, M, Phylip, H.L, Lees, W.E, Winther, J.R, Dunn, B.M, Wlodawer, A, Kay, J, Guschina, A.
Deposit date:1999-12-27
Release date:2000-05-03
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The aspartic proteinase from Saccharomyces cerevisiae folds its own inhibitor into a helix.
Nat.Struct.Biol., 7, 2000
1DP5
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THE STRUCTURE OF PROTEINASE A COMPLEXED WITH A IA3 MUTANT INHIBITOR
Descriptor: PROTEINASE A, PROTEINASE INHIBITOR IA3, beta-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-3)-[beta-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Li, M, Phylip, H.L, Lees, W.E, Winther, J.R, Dunn, B.M, Wlodawer, A, Kay, J, Guschina, A.
Deposit date:1999-12-23
Release date:2000-05-03
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The aspartic proteinase from Saccharomyces cerevisiae folds its own inhibitor into a helix.
Nat.Struct.Biol., 7, 2000
2KXQ
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BU of 2kxq by Molmil
Solution Structure of Smurf2 WW2 and WW3 bound to Smad7 PY motif containing peptide
Descriptor: E3 ubiquitin-protein ligase SMURF2, Smad7 PY motif containing peptide
Authors:Chong, A, Lin, H, Wrana, J, Forman-Kay, J.D.
Deposit date:2010-05-11
Release date:2010-10-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Coupling of tandem Smad ubiquitination regulatory factor (Smurf) WW domains modulates target specificity.
Proc.Natl.Acad.Sci.USA, 107, 2010
2LC4
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BU of 2lc4 by Molmil
Solution Structure of PilP from Pseudomonas aeruginosa
Descriptor: PilP protein
Authors:Howell, P, Tammam, S, Chong, P, Forman-Kay, J.D.
Deposit date:2011-04-22
Release date:2011-12-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Characterization of the PilN, PilO and PilP type IVa pilus subcomplex.
Mol.Microbiol., 82, 2011
6ULP
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BRD3-BD2 in complex with the cyclic peptide 3.2_3
Descriptor: Bromodomain-containing protein 3, Cyclic peptide 3.2_3
Authors:Patel, K, Walshe, J.L, Walport, L.J, Mackay, J.P.
Deposit date:2019-10-08
Release date:2020-08-19
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Cyclic peptides can engage a single binding pocket through highly divergent modes.
Proc.Natl.Acad.Sci.USA, 117, 2020
6U74
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BU of 6u74 by Molmil
BRD4-BD1 in complex with the cyclic peptide 3.1_2
Descriptor: Bromodomain-containing protein 4, cyclic peptide 3.1_2
Authors:Patel, K, Walshe, J.L, Walport, L.J, Mackay, J.P.
Deposit date:2019-08-31
Release date:2020-08-19
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Cyclic peptides can engage a single binding pocket through highly divergent modes.
Proc.Natl.Acad.Sci.USA, 117, 2020
6U8I
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BRD4-BD2 in complex with the cyclic peptide 3.2_2
Descriptor: AMINO GROUP, Bromodomain-containing protein 4, cyclic peptide 3.2_2
Authors:Patel, K, Walshe, J.L, Walport, L.J, Mackay, J.P.
Deposit date:2019-09-05
Release date:2020-08-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Cyclic peptides can engage a single binding pocket through highly divergent modes.
Proc.Natl.Acad.Sci.USA, 117, 2020
6ULV
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BU of 6ulv by Molmil
BRD4-BD1 in complex with the cyclic peptide 4.2_1
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Bromodomain-containing protein 4, Cyclic peptide 4.2_3, ...
Authors:Patel, K, Walshe, J.L, Walport, L.J, Mackay, J.P.
Deposit date:2019-10-08
Release date:2020-12-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Cyclic peptides can engage a single binding pocket through highly divergent modes.
Proc.Natl.Acad.Sci.USA, 117, 2020
6ULT
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BU of 6ult by Molmil
BRD2-BD2 in complex with the cyclic peptide 4.2_3
Descriptor: Bromodomain-containing protein 2, Cyclic peptide 4.2_3
Authors:Patel, K, Walshe, J.L, Walport, L.J, Mackay, J.P.
Deposit date:2019-10-08
Release date:2021-02-24
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Cyclic peptides can engage a single binding pocket through highly divergent modes.
Proc.Natl.Acad.Sci.USA, 117, 2020
8TX8
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BU of 8tx8 by Molmil
Crystal Structure of RBBP4 bound to ZNF512B peptide
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, FORMIC ACID, ...
Authors:Deshpande, C.N, Mackay, J.P.
Deposit date:2023-08-22
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:ZNF512B binds RBBP4 via a variant NuRD interaction motif and aggregates chromatin in a NuRD complex-independent manner.
Nucleic Acids Res., 2024
8D4Y
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BU of 8d4y by Molmil
C-terminal SANT-SLIDE domain of human Chromodomain-helicase-DNA-binding protein 4 (CHD4)
Descriptor: Chromodomain-helicase-DNA-binding protein 4
Authors:Moghaddas Sani, H, Deshpande, C.N, Panjikar, S, Patel, K, Mackay, J.P.
Deposit date:2022-06-03
Release date:2022-12-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The role of auxiliary domains in modulating CHD4 activity suggests mechanistic commonality between enzyme families.
Nat Commun, 13, 2022
8CV7
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BU of 8cv7 by Molmil
Peptide 2.2E in complex with BRD2-BD2
Descriptor: ACETYL GROUP, AMINO GROUP, Isoform 3 of Bromodomain-containing protein 2, ...
Authors:Franck, C, Mackay, J.P.
Deposit date:2022-05-18
Release date:2023-05-24
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Discovery and characterization of cyclic peptides selective for the C-terminal bromodomains of BET family proteins.
Structure, 31, 2023
8CV4
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Peptide 4.2C in complex with BRD4.2
Descriptor: ACETYL GROUP, AMINO GROUP, BRD4 protein, ...
Authors:Franck, C, Mackay, J.P.
Deposit date:2022-05-18
Release date:2023-05-24
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Discovery and characterization of cyclic peptides selective for the C-terminal bromodomains of BET family proteins.
Structure, 31, 2023
6OM5
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Structure of a haemophore from Haemophilus haemolyticus
Descriptor: CHLORIDE ION, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Torrado, M, Walshe, J.L, Mackay, J.P, Guss, J.M, Gell, D.A.
Deposit date:2019-04-18
Release date:2019-12-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A heme-binding protein produced by Haemophilus haemolyticus inhibits non-typeable Haemophilus influenzae.
Mol.Microbiol., 113, 2020
8CV5
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BU of 8cv5 by Molmil
Peptide 4.2B in complex with BRD3.2
Descriptor: ACETYL GROUP, AMINO GROUP, Bromodomain-containing protein 3, ...
Authors:Franck, C, Mackay, J.P.
Deposit date:2022-05-18
Release date:2023-05-24
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Discovery and characterization of cyclic peptides selective for the C-terminal bromodomains of BET family proteins.
Structure, 31, 2023
8CV6
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Peptide 4.2B in complex with BRD4.2
Descriptor: ACETYL GROUP, AMINO GROUP, BRD4 protein, ...
Authors:Franck, C, Mackay, J.P.
Deposit date:2022-05-18
Release date:2023-05-24
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Discovery and characterization of cyclic peptides selective for the C-terminal bromodomains of BET family proteins.
Structure, 31, 2023
6PTL
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BU of 6ptl by Molmil
Structure of the self-association domain of the chromatin looping factor LDB1
Descriptor: LIM domain-binding protein 1
Authors:Macindoe, I, Silva, A, Guss, J.M, Mackay, J.P, Matthews, J.M.
Deposit date:2019-07-16
Release date:2020-07-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the self-association domain of the chromatin looping factor LDB1
To Be Published
3G9Y
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Crystal structure of the second zinc finger from ZRANB2/ZNF265 bound to 6 nt ssRNA sequence AGGUAA
Descriptor: RNA (5'-R(*AP*GP*GP*UP*AP*A)-3'), ZINC ION, Zinc finger Ran-binding domain-containing protein 2
Authors:Loughlin, F.E, McGrath, A.P, Lee, M, Guss, J.M, Mackay, J.P.
Deposit date:2009-02-15
Release date:2009-03-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The zinc fingers of the SR-like protein ZRANB2 are single-stranded RNA-binding domains that recognize 5' splice site-like sequences
Proc.Natl.Acad.Sci.USA, 106, 2009

227561

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