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PDB: 1867 results

4IUW
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Crystal structure of PEPO from Lactobacillus rhamnosis HN001 (DR20)
Descriptor: CARBONATE ION, CITRIC ACID, Neutral endopeptidase, ...
Authors:Anderson, B.F, Knapp, K.M, Holland, R, Norris, G.E, Christensson, C, Bratt, H, Collins, L.J, Coolbear, T, Lubbers, M.W, Toole, P.W.O, Reid, J.R, Jameson, G.B.
Deposit date:2013-01-21
Release date:2013-03-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of PEPO from Lactobacillus rhamnosis HN001 (DR20)
TO BE PUBLISHED
4J8M
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Aurora A in complex with CD532
Descriptor: 1,2-ETHANEDIOL, 1-[4-[[4-[(5-cyclopentyl-1H-pyrazol-3-yl)amino]pyrimidin-2-yl]amino]phenyl]-3-[3-(trifluoromethyl)phenyl]urea, Aurora kinase A, ...
Authors:Meyerowitz, J.G, Gustafson, W.C, Shokat, K.M, Weiss, W.A.
Deposit date:2013-02-14
Release date:2014-09-10
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.853 Å)
Cite:Drugging MYCN through an Allosteric Transition in Aurora Kinase A.
Cancer Cell, 26, 2014
4KHR
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BU of 4khr by Molmil
HCV NS5B GT1A C316Y with GSK5852
Descriptor: NS5B RNA-dependent RNA polymerase, SULFATE ION, [4-({[5-cyclopropyl-2-(4-fluorophenyl)-3-(methylcarbamoyl)-1-benzofuran-6-yl](methylsulfonyl)amino}methyl)-2-fluorophenyl]boronic acid
Authors:Williams, S.P, Kahler, K.M, Shotwell, J.B.
Deposit date:2013-05-01
Release date:2013-05-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Discovery of a Potent Boronic Acid Derived Inhibitor of the HCV RNA-Dependent RNA Polymerase.
J.Med.Chem., 57, 2014
4KEB
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BU of 4keb by Molmil
Human dihydrofolate reductase complexed with NADPH and 5-{3-[3-methoxy-5-(isoquin-5-yl)phenyl]but-1-yn-1-yl}6-ethylpyrimidine-2,4-diamine
Descriptor: 6-ethyl-5-{(3S)-3-[3-(isoquinolin-5-yl)-5-methoxyphenyl]but-1-yn-1-yl}pyrimidine-2,4-diamine, Dihydrofolate reductase, FOLIC ACID, ...
Authors:Lamb, K.M, Anderson, A.C.
Deposit date:2013-04-25
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Elucidating features that drive the design of selective antifolates using crystal structures of human dihydrofolate reductase.
Biochemistry, 52, 2013
4KRP
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BU of 4krp by Molmil
Nanobody/VHH domain 9G8 in complex with the extracellular region of EGFR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cetuximab heavy chain, ...
Authors:Ferguson, K.M, Schmitz, K.R.
Deposit date:2013-05-16
Release date:2013-08-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.823 Å)
Cite:Structural Evaluation of EGFR Inhibition Mechanisms for Nanobodies/VHH Domains.
Structure, 21, 2013
4KFJ
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BU of 4kfj by Molmil
Human dihydrofolate reductase complexed with NADPH and 5-{3-[3-methoxy-5-(isoquin-5-yl)phenyl]prop-1-yn-1-yl}6-ethylprimidine-2,4-diamine
Descriptor: 6-ethyl-5-{3-[3-(isoquinolin-5-yl)-5-methoxyphenyl]prop-1-yn-1-yl}pyrimidine-2,4-diamine, CHLORIDE ION, Dihydrofolate reductase, ...
Authors:Lamb, K.M, Anderson, A.C.
Deposit date:2013-04-26
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Elucidating features that drive the design of selective antifolates using crystal structures of human dihydrofolate reductase.
Biochemistry, 52, 2013
4KKO
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BU of 4kko by Molmil
Crystal Structure of HIV-1 Reverse Transcriptase in Complex with 4-((4-methoxy-6-(2-morpholinoethoxy)-1,3,5-triazin-2-yl)amino)-2-((3-methylbut-2-en-1-yl)oxy)benzonitrile (JLJ513), a non-nucleoside inhibitor
Descriptor: 4-({4-methoxy-6-[2-(morpholin-4-yl)ethoxy]-1,3,5-triazin-2-yl}amino)-2-(3-methylbutoxy)benzonitrile, HIV-1 reverse transcriptase, p51 subunit, ...
Authors:Frey, K.M, Anderson, K.S.
Deposit date:2013-05-06
Release date:2013-08-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Extension into the entrance channel of HIV-1 reverse transcriptase-Crystallography and enhanced solubility.
Bioorg.Med.Chem.Lett., 23, 2013
4KRO
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BU of 4kro by Molmil
Nanobody/VHH domain EgA1 in complex with the extracellular region of EGFR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cetuximab heavy chain, ...
Authors:Ferguson, K.M, Schmitz, K.R.
Deposit date:2013-05-16
Release date:2013-08-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.054 Å)
Cite:Structural Evaluation of EGFR Inhibition Mechanisms for Nanobodies/VHH Domains.
Structure, 21, 2013
4L3X
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BU of 4l3x by Molmil
Nitrite complex of TvNiR, first middle dose data set
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Eight-heme nitrite reductase, ...
Authors:Trofimov, A.A, Polyakov, K.M, Lazarenko, V.A, Popov, A.N, Tikhonova, T.V, Tikhonov, A.V, Popov, V.O.
Deposit date:2013-06-07
Release date:2014-06-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Investigation of the X-ray-induced nitrite reduction catalysed by cytochrome c nitrite reductase from the bacterium Thioalkalivibrio nitratireducens
To be Published
4LD0
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BU of 4ld0 by Molmil
T. thermophilus RuvC in complex with Holliday junction substrate
Descriptor: Crossover junction endodeoxyribonuclease RuvC, DNA 11-MER, DNA 13-MER, ...
Authors:Gorecka, K.M, Komorowska, W, Nowotny, M.
Deposit date:2013-06-24
Release date:2013-09-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.75 Å)
Cite:Crystal structure of RuvC resolvase in complex with Holliday junction substrate.
Nucleic Acids Res., 41, 2013
4KB7
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BU of 4kb7 by Molmil
HCV NS5B GT1B N316Y with CMPD 32
Descriptor: 5-cyclopropyl-2-(4-fluorophenyl)-6-[{2-[(3R)-1-hydroxy-1,3-dihydro-2,1-benzoxaborol-3-yl]ethyl}(methylsulfonyl)amino]-N-methyl-1-benzofuran-3-carboxamide, HCV Polymerase
Authors:Williams, S.P, Kahler, K.M, Shotwell, J.B.
Deposit date:2013-04-23
Release date:2013-05-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Discovery of a Potent Boronic Acid Derived Inhibitor of the HCV RNA-Dependent RNA Polymerase.
J.Med.Chem., 57, 2014
4LBP
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BU of 4lbp by Molmil
5-chloro-2-hydroxyhydroquinone dehydrochlorinase (TftG) from Burkholderia phenoliruptrix AC1100: Complex with 2,5-dihydroxybenzoquinone
Descriptor: 2,5-dihydroxycyclohexa-2,5-diene-1,4-dione, 5-chloro-2-hydroxyhydroquinone dehydrochlorinase (TftG)
Authors:Hayes, R.P, Lewis, K.M, Xun, L, Kang, C.
Deposit date:2013-06-20
Release date:2013-08-28
Last modified:2013-10-23
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Catalytic Mechanism of 5-Chlorohydroxyhydroquinone Dehydrochlorinase from the YCII Superfamily of Largely Unknown Function.
J.Biol.Chem., 288, 2013
4JHU
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BU of 4jhu by Molmil
T2-depleted laccase from Coriolopsis caperata soaked with CuCl
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, LACCASE, ...
Authors:Polyakov, K.M, Fedorova, T.V, Glazunova, O.A, Kurzeev, S.A, Maloshenok, L.G, Koroleva, O.A.
Deposit date:2013-03-05
Release date:2014-04-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Elucidation of the crystal structure of Coriolopsis caperata laccase: restoration of the structure and activity of the native enzyme from the T2-depleted form by copper ions.
Acta Crystallogr.,Sect.D, 71, 2015
4JWX
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BU of 4jwx by Molmil
GluN2A ligand-binding core in complex with propyl-NHP5G
Descriptor: (2R)-amino(1-hydroxy-4-propyl-1H-pyrazol-5-yl)ethanoic acid, GluN2A
Authors:Hansen, K.B, Tajima, N, Risgaard, R, Perszyk, R.E, Jorgensen, L, Vance, K.M, Ogden, K.K, Clausen, R.P, Furukawa, H, Traynelis, S.F.
Deposit date:2013-03-27
Release date:2013-05-29
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural determinants of agonist efficacy at the glutamate binding site of N-methyl-d-aspartate receptors.
Mol.Pharmacol., 84, 2013
4L3Z
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BU of 4l3z by Molmil
Nitrite complex of TvNiR, second middle dose data set
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Eight-heme nitrite reductase, ...
Authors:Trofimov, A.A, Polyakov, K.M, Lazarenko, V.A, Popov, A.N, Tikhonova, T.V, Tikhonov, A.V, Popov, V.O.
Deposit date:2013-06-07
Release date:2014-06-11
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Investigation of the X-ray-induced nitrite reduction catalysed by cytochrome c nitrite reductase from the bacterium Thioalkalivibrio nitratireducens
To be Published
4L8G
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BU of 4l8g by Molmil
Crystal Structure of K-Ras G12C, GDP-bound
Descriptor: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Ostrem, J.M, Peters, U, Sos, M.L, Wells, J.A, Shokat, K.M.
Deposit date:2013-06-17
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.521 Å)
Cite:K-Ras(G12C) inhibitors allosterically control GTP affinity and effector interactions.
Nature, 503, 2013
4KXY
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BU of 4kxy by Molmil
Human transketolase in complex with ThDP analogue (R)-2-(1,2-dihydroxyethyl)-3-deaza-ThDP
Descriptor: 1,2-ETHANEDIOL, 2-{4-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-[(1R)-1,2-dihydroxyethyl]-3-methylthiophen-2-yl}ethyl trihydrogen diphosphate, CALCIUM ION, ...
Authors:Neumann, P, Luedtke, S, Erixon, K.M, Leeper, F, Kluger, R, Ficner, R, Tittmann, K.
Deposit date:2013-05-28
Release date:2013-08-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Sub-angstrom-resolution crystallography reveals physical distortions that enhance reactivity of a covalent enzymatic intermediate.
Nat Chem, 5, 2013
4L38
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BU of 4l38 by Molmil
Nitrite complex of TvNiR, low dose data set
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Eight-heme nitrite reductase, ...
Authors:Trofimov, A.A, Polyakov, K.M, Lazarenko, V.A, Popov, A.N, Tikhonova, T.V, Tikhonov, A.V, Popov, V.O.
Deposit date:2013-06-05
Release date:2014-07-16
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Investigation of the X-ray-induced nitrite reduction catalysed by cytochrome c nitrite reductase from the bacterium Thioalkalivibrio nitratireducens
To be Published
4JWY
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BU of 4jwy by Molmil
GluN2D ligand-binding core in complex with propyl-NHP5G
Descriptor: (2R)-amino(1-hydroxy-4-propyl-1H-pyrazol-5-yl)ethanoic acid, Glutamate receptor ionotropic, NMDA 2D
Authors:Hansen, K.B, Tajima, N, Risgaard, R, Perszyk, R.E, Jorgensen, L, Vance, K.M, Ogden, K.K, Clausen, R.P, Furukawa, H, Traynelis, S.F.
Deposit date:2013-03-27
Release date:2013-05-29
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural determinants of agonist efficacy at the glutamate binding site of N-methyl-d-aspartate receptors.
Mol.Pharmacol., 84, 2013
4J8N
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BU of 4j8n by Molmil
Aurora A Kinase Apo
Descriptor: Aurora kinase A
Authors:Meyerowitz, J.G, Gustafson, W.C, Shokat, K.M, Weiss, W.A.
Deposit date:2013-02-14
Release date:2014-09-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.135 Å)
Cite:Drugging MYCN through an Allosteric Transition in Aurora Kinase A.
Cancer Cell, 26, 2014
4JHV
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BU of 4jhv by Molmil
T2-depleted laccase from Coriolopsis caperata
Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, COPPER (II) ION, ...
Authors:Polyakov, K.M, Fedorova, T.V, Glazunova, O.A, Kurzeev, S.A, Maloshenok, L.G, Lamzin, V.S, Koroleva, O.V.
Deposit date:2013-03-05
Release date:2014-04-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Elucidation of the crystal structure of Coriolopsis caperata laccase: restoration of the structure and activity of the native enzyme from the T2-depleted form by copper ions.
Acta Crystallogr.,Sect.D, 71, 2015
4L3Y
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BU of 4l3y by Molmil
Nitrite complex of TvNiR, high dose data set (NO complex)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Eight-heme nitrite reductase, ...
Authors:Trofimov, A.A, Polyakov, K.M, Lazarenko, V.A, Popov, A.N, Tikhonova, T.V, Tikhonov, A.V, Popov, V.O.
Deposit date:2013-06-07
Release date:2014-06-11
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Investigation of the X-ray-induced nitrite reduction catalysed by cytochrome c nitrite reductase from the bacterium Thioalkalivibrio nitratireducens
To be Published
4L9W
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BU of 4l9w by Molmil
Crystal Structure of H-Ras G12C, GMPPNP-bound
Descriptor: CALCIUM ION, GTPase HRas, MAGNESIUM ION, ...
Authors:Ostrem, J.M, Peters, U, Sos, M.L, Wells, J.A, Shokat, K.M.
Deposit date:2013-06-18
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:K-Ras(G12C) inhibitors allosterically control GTP affinity and effector interactions.
Nature, 503, 2013
4LBI
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BU of 4lbi by Molmil
5-chloro-2-hydroxyhydroquinone dehydrochlorinase (TftG) from Burkholderia phenoliruptrix AC1100: Selenomethionyl Apo-form
Descriptor: 5-chloro-2-hydroxyhydroquinone dehydrochlorinase (TftG)
Authors:Hayes, R.P, Lewis, K.M, Xun, L, Kang, C.
Deposit date:2013-06-20
Release date:2013-08-28
Last modified:2013-10-23
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Catalytic Mechanism of 5-Chlorohydroxyhydroquinone Dehydrochlorinase from the YCII Superfamily of Largely Unknown Function.
J.Biol.Chem., 288, 2013
4KKP
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BU of 4kkp by Molmil
Crystal structure of Vibrio cholerae RbmA (crystal form 2)
Descriptor: RbmA protein
Authors:Sondermann, H, Giglio, K.M.
Deposit date:2013-05-06
Release date:2013-05-22
Last modified:2013-07-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for Biofilm Formation via the Vibrio cholerae Matrix Protein RbmA.
J.Bacteriol., 195, 2013

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