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PDB: 123 results

4AO7
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Zinc bound structure of a novel cold-adapted esterase from an Arctic intertidal metagenomic library
Descriptor: ESTERASE, ZINC ION
Authors:Fu, J, Leiros, H.-K.S, Pascale, D.d, Johnson, K.A, Blencke, H.M, Landfald, B.
Deposit date:2012-03-23
Release date:2012-08-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Functional and Structural Studies of a Novel Cold-Adapted Esterase from an Arctic Intertidal Metagenomic Library.
Appl.Microbiol.Biotechnol., 97, 2013
1VJH
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Crystal structure of gene product of At1g24000 from Arabidopsis thaliana
Descriptor: Bet v I allergen family
Authors:Wesenberg, G.E, Smith, D.W, Phillips Jr, G.N, Johnson, K.A, Bingman, C.A, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2004-02-20
Release date:2004-03-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:1H, 15N and 13C resonance assignments of the putative Bet v 1 family protein At1g24000.1 from Arabidopsis thaliana.
J.Biomol.Nmr, 32, 2005
4AO8
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PEG-bound complex of a novel cold-adapted esterase from an Arctic intertidal metagenomic library
Descriptor: DI(HYDROXYETHYL)ETHER, ESTERASE
Authors:Fu, J, Leiros, H.-K.S, Pascale, D.d, Johnson, K.A, Blencke, H.M, Landfald, B.
Deposit date:2012-03-23
Release date:2012-08-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Functional and Structural Studies of a Novel Cold-Adapted Esterase from an Arctic Intertidal Metagenomic Library.
Appl.Microbiol.Biotechnol., 97, 2013
4LYL
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BU of 4lyl by Molmil
Crystal structure of uracil-DNA glycosylase from cod (Gadus morhua) in complex with the proteinaceous inhibitor UGI
Descriptor: Uracil-DNA glycosylase, Uracil-DNA glycosylase inhibitor
Authors:Assefa, N.G, Niiranen, L.M.K, Johnson, K.A, Leiros, H.-K.S, Smalas, A.O, Willassen, N.P, Moe, E.
Deposit date:2013-07-31
Release date:2014-08-13
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural and biophysical analysis of interactions between cod and human uracil-DNA N-glycosylase (UNG) and UNG inhibitor (Ugi).
Acta Crystallogr.,Sect.D, 70, 2014
7S4X
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Cas9:gRNA in complex with 18-20MM DNA, 1 minute time-point, kinked active conformation
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, MAGNESIUM ION, NTS, ...
Authors:Bravo, J.P.K, Taylor, D.W, Liu, M.S, Johnson, K.A.
Deposit date:2021-09-09
Release date:2022-03-02
Last modified:2022-03-23
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Structural basis for mismatch surveillance by CRISPR-Cas9.
Nature, 603, 2022
3PN1
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Novel Bacterial NAD+-dependent DNA Ligase Inhibitors with Broad Spectrum Potency and Antibacterial Efficacy In Vivo
Descriptor: 1-(2,4-dimethylbenzyl)-6-oxo-1,6-dihydropyridine-3-carboxamide, 2-(butylsulfanyl)adenosine, DNA ligase
Authors:Mills, S, Eakin, A, Buurman, E, Newman, J, Gao, N, Huynh, H, Johnson, K, Lahiri, S, Shapiro, A, Walkup, G, Wei, Y, Stokes, S.
Deposit date:2010-11-18
Release date:2011-01-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Novel Bacterial NAD+-Dependent DNA Ligase Inhibitors with Broad-Spectrum Activity and Antibacterial Efficacy In Vivo.
Antimicrob.Agents Chemother., 55, 2011
7S4U
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Cryo-EM structure of Cas9 in complex with 12-14MM DNA substrate, 5 minute time-point
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, Non-target strand, Target strand, ...
Authors:Bravo, J.P.K, Taylor, D.W, Liu, M.S, Johnson, K.A.
Deposit date:2021-09-09
Release date:2022-03-02
Last modified:2022-03-23
Method:ELECTRON MICROSCOPY (3.56 Å)
Cite:Structural basis for mismatch surveillance by CRISPR-Cas9.
Nature, 603, 2022
7S4V
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Cas9 bound to 12-14MM DNA, 60 min time-point, kinked conformation
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, NTS, TS, ...
Authors:Bravo, J.P.K, Taylor, D.W, Liu, M.S, Johnson, K.A.
Deposit date:2021-09-09
Release date:2022-03-02
Last modified:2022-03-23
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Structural basis for mismatch surveillance by CRISPR-Cas9.
Nature, 603, 2022
3OHT
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BU of 3oht by Molmil
Crystal Structure of Salmo Salar p38alpha
Descriptor: N-(2-CHLORO-6-METHYLPHENYL)-2-({6-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]-2-METHYLPYRIMIDIN-4-YL}AMINO)-1,3-THIAZOLE-5-CARBOXAMIDE, SULFATE ION, p38a
Authors:Rothweiler, U, Johnson, K, Engh, R.A.
Deposit date:2010-08-18
Release date:2011-06-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:p38alpha MAP kinase dimers with swapped activation segments and a novel catalytic loop conformation
J.Mol.Biol., 411, 2011
3C6W
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Crystal structure of the ING5 PHD finger in complex with H3K4me3 peptide
Descriptor: H3K4me3 histone peptide, Inhibitor of growth protein 5, ZINC ION
Authors:Champagne, K.S, Pena, P.V, Johnson, K, Kutateladze, T.G.
Deposit date:2008-02-05
Release date:2008-06-03
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The crystal structure of the ING5 PHD finger in complex with an H3K4me3 histone peptide.
Proteins, 72, 2008
3VQH
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Bromine SAD partially resolves multiple binding modes for PKA inhibitor H-89
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, N-[2-(4-BROMOCINNAMYLAMINO)ETHYL]-5-ISOQUINOLINE SULFONAMIDE, cAMP-dependent protein kinase catalytic subunit alpha, ...
Authors:Pflug, A, Johnson, K.A, Engh, R.A.
Deposit date:2012-03-23
Release date:2012-08-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Anomalous dispersion analysis of inhibitor flexibility: a case study of the kinase inhibitor H-89
Acta Crystallogr.,Sect.F, 68, 2012
3FFE
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BU of 3ffe by Molmil
Structure of Achromobactin Synthetase Protein D, (AcsD)
Descriptor: AcsD
Authors:McMahon, S.A, Liu, H, Carter, L, Oke, M, Johnson, K.A, Schmelz, S, Challis, G.L, White, M.F, Naismith, J.H, Scottish Structural Proteomics Facility (SSPF)
Deposit date:2008-12-03
Release date:2009-02-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:AcsD catalyzes enantioselective citrate desymmetrization in siderophore biosynthesis
Nat.Chem.Biol., 5, 2009
1F8V
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THE STRUCTURE OF PARIACOTO VIRUS REVEALS A DODECAHEDRAL CAGE OF DUPLEX RNA
Descriptor: CALCIUM ION, MATURE CAPSID PROTEIN BETA, MATURE CAPSID PROTEIN GAMMA, ...
Authors:Tang, L, Johnson, K.N, Ball, L.A, Lin, T, Yeager, M, Johnson, J.E.
Deposit date:2000-07-05
Release date:2000-12-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of pariacoto virus reveals a dodecahedral cage of duplex RNA.
Nat.Struct.Biol., 8, 2001
1GJY
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The X-ray structure of the Sorcin Calcium Binding Domain (SCBD) provides insight into the phosphorylation and calcium dependent processess
Descriptor: SORCIN, SULFATE ION
Authors:Ilari, A, Johnson, K.A, Nastopoulos, V, Tsernoglou, D, Chiancone, E.
Deposit date:2001-08-06
Release date:2002-04-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Crystal Structure of the Sorcin Calcium Binding Domain Provides a Model of Ca(2+)-Dependent Processes in the Full-Length Protein
J.Mol.Biol., 317, 2002
1LBY
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Crystal Structure of a complex (P32 crystal form) of dual activity FBPase/IMPase (AF2372) from Archaeoglobus fulgidus with 3 Manganese ions, Fructose-6-Phosphate, and Phosphate ion
Descriptor: 6-O-phosphono-beta-D-fructofuranose, MANGANESE (II) ION, PHOSPHATE ION, ...
Authors:Stieglitz, K.A, Johnson, K.A, Yang, H, Roberts, M.F, Seaton, B.A, Head, J.F, Stec, B.
Deposit date:2002-04-04
Release date:2002-05-22
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of a dual activity IMPase/FBPase (AF2372) from Archaeoglobus fulgidus. The story of a mobile loop.
J.Biol.Chem., 277, 2002
1LBV
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Crystal Structure of apo-form (P21) of dual activity FBPase/IMPase (AF2372) from Archaeoglobus fulgidus
Descriptor: fructose 1,6-bisphosphatase/inositol monophosphatase
Authors:Stieglitz, K.A, Johnson, K.A, Yang, H, Roberts, M.F, Seaton, B.A, Head, J.F, Stec, B.
Deposit date:2002-04-04
Release date:2002-05-22
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a dual activity IMPase/FBPase (AF2372) from Archaeoglobus fulgidus. The story of a mobile loop.
J.Biol.Chem., 277, 2002
2X5F
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Crystal structure of the methicillin-resistant Staphylococcus aureus Sar2028, an aspartate_tyrosine_phenylalanine pyridoxal-5'-phosphate dependent aminotransferase
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ASPARTATE_TYROSINE_PHENYLALANINE PYRIDOXAL-5' PHOSPHATE-DEPENDENT AMINOTRANSFERASE, MAGNESIUM ION, ...
Authors:Oke, M, Carter, L.G, Johnson, K.A, Liu, H, Mcmahon, S.A, White, M.F, Naismith, J.H.
Deposit date:2010-02-08
Release date:2010-07-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Scottish Structural Proteomics Facility: Targets, Methods and Outputs.
J.Struct.Funct.Genom., 11, 2010
1DK4
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BU of 1dk4 by Molmil
CRYSTAL STRUCTURE OF MJ0109 GENE PRODUCT INOSITOL MONOPHOSPHATASE
Descriptor: INOSITOL MONOPHOSPHATASE, PHOSPHATE ION, ZINC ION
Authors:Stec, B, Yang, H, Johnson, K.A, Chen, L, Roberts, M.F.
Deposit date:1999-12-06
Release date:2000-11-08
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:MJ0109 is an enzyme that is both an inositol monophosphatase and the 'missing' archaeal fructose-1,6-bisphosphatase.
Nat.Struct.Biol., 7, 2000
2X3F
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Crystal Structure of the Methicillin-Resistant Staphylococcus aureus Sar2676, a Pantothenate Synthetase.
Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, PANTHOTHENATE SYNTHETASE, SULFATE ION
Authors:Oke, M, Carter, L.G, Johnson, K.A, Liu, H, Mcmahon, S.A, White, M.F, Naismith, J.H.
Deposit date:2010-01-24
Release date:2010-07-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The Scottish Structural Proteomics Facility: Targets, Methods and Outputs.
J.Struct.Funct.Genom., 11, 2010
2X5D
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BU of 2x5d by Molmil
Crystal Structure of a probable aminotransferase from Pseudomonas aeruginosa
Descriptor: PROBABLE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
Authors:Oke, M, Carter, L.G, Johnson, K.A, Liu, H, Mcmahon, S.A, White, M.F, Naismith, J.H.
Deposit date:2010-02-08
Release date:2010-07-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The Scottish Structural Proteomics Facility: Targets, Methods and Outputs.
J.Struct.Funct.Genom., 11, 2010
2W6W
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Crystal structure of recombinant Sperm Whale Myoglobin under 1atm of Xenon
Descriptor: GLYCEROL, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Miele, A.E, Draghi, F, Renzi, F, Sciara, G, Johnson, K.A, Vallone, B, Brunori, M, Savino, C.
Deposit date:2008-12-19
Release date:2009-04-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Pattern of Cavities in Globins: The Case of Human Hemoglobin.
Biopolymers, 91, 2009
1OGQ
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The crystal structure of PGIP (polygalacturonase inhibiting protein), a leucine rich repeat protein involved in plant defense
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, POLYGALACTURONASE INHIBITING PROTEIN
Authors:Di Matteo, A, Federici, L, Mattei, B, Salvi, G, Johnson, K.A, Savino, C, De Lorenzo, G, Tsernoglou, D, Cervone, F.
Deposit date:2003-05-08
Release date:2003-07-24
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Crystal Structure of Polygalacturonase-Inhibiting Protein (Pgip), a Leucine-Rich Repeat Protein Involved in Plant Defense
Proc.Natl.Acad.Sci.USA, 100, 2003
2W72
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DEOXYGENATED STRUCTURE OF A DISTAL SITE HEMOGLOBIN MUTANT PLUS XE
Descriptor: HUMAN HEMOGLOBIN A, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Miele, A.E, Draghi, F, Sciara, G, Johnson, K.A, Renzi, F, Vallone, B, Brunori, M, Savino, C.
Deposit date:2008-12-19
Release date:2009-04-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Pattern of Cavities in Globins: The Case of Human Hemoglobin.
Biopolymers, 91, 2009
2W17
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CDK2 in complex with the imidazole pyrimidine amide, compound (S)-8b
Descriptor: ACETATE ION, CELL DIVISION PROTEIN KINASE 2, N-(4-{[(3S)-3-(dimethylamino)pyrrolidin-1-yl]carbonyl}phenyl)-5-fluoro-4-[2-methyl-1-(1-methylethyl)-1H-imidazol-5-yl]pyrimidin-2-amine
Authors:Jones, C.D, Andrews, D.M, Barker, A.J, Blades, K, Daunt, P, East, S, Geh, C, Graham, M.A, Johnson, K.M, Loddick, S.A, McFarland, H.M, McGregor, A, Moss, L, Rudge, D.A, Simpson, P.B, Swain, M.L, Tam, K.Y, Tucker, J.A, Walker, M, Brassington, C, Haye, H, McCall, E.
Deposit date:2008-10-15
Release date:2008-11-04
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The Discovery of Azd5597, a Potent Imidazole Pyrimidine Amide Cdk Inhibitor Suitable for Intravenous Dosing.
Bioorg.Med.Chem.Lett., 18, 2008
1Q4R
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Gene Product of At3g17210 from Arabidopsis Thaliana
Descriptor: MAGNESIUM ION, protein At3g17210
Authors:Phillips Jr, G.N, Bingman, C.A, Johnson, K.A, Smith, D.W, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2003-08-04
Release date:2003-11-25
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the protein from gene At3g17210 of Arabidopsis thaliana
Proteins, 57, 2004

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