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PDB: 2886 results

3ICV
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BU of 3icv by Molmil
Structural Consequences of a Circular Permutation on Lipase B from Candida Antartica
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Lipase B
Authors:Horton, J.R, Qian, Z, Jia, D, Lutz, S, Cheng, X.
Deposit date:2009-07-18
Release date:2009-10-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structural redesign of lipase B from Candida antarctica by circular permutation and incremental truncation.
J.Mol.Biol., 393, 2009
6CO2
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BU of 6co2 by Molmil
Structure of an engineered protein (NUDT16TI) in complex with 53BP1 Tudor domains
Descriptor: NUDT16-Tudor-interacting (NUDT16TI), TP53-binding protein 1
Authors:Botuyan, M.V, Thompson, J.R, Cui, G, Mer, G.
Deposit date:2018-03-10
Release date:2018-06-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Mechanism of 53BP1 activity regulation by RNA-binding TIRR and a designer protein.
Nat. Struct. Mol. Biol., 25, 2018
1GTK
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BU of 1gtk by Molmil
Time-resolved and static-ensemble structural chemistry of hydroxymethylbilane synthase
Descriptor: 3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid, PORPHOBILINOGEN DEAMINASE
Authors:Helliwell, J.R, Nieh, Y.P, Raftery, J, Cassetta, A, Habash, J, Carr, P.D, Ursby, T, Wulff, M, Thompson, A.W, Niemann, A.C, Haedener, A.
Deposit date:2002-01-16
Release date:2003-01-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Time-Resolved and Static-Ensemble Structural Chemistry of Hydroxymethylbilane Synthase
Faraday Discuss., 122, 2003
4WLB
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BU of 4wlb by Molmil
Crystal structure of RORc in complex with a partial inverse agonist compound
Descriptor: L(+)-TARTARIC ACID, N-(4-fluorobenzyl)-N-(2-methylpropyl)-6-{[1-(methylsulfonyl)piperidin-4-yl]amino}pyridine-3-sulfonamide, Nuclear receptor ROR-gamma, ...
Authors:Boenig, G, Hymowitz, S.G, Kiefer, J.R.
Deposit date:2014-10-07
Release date:2014-11-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.702 Å)
Cite:A reversed sulfonamide series of selective RORc inverse agonists.
Bioorg.Med.Chem.Lett., 24, 2014
4WUY
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BU of 4wuy by Molmil
Crystal Structure of Protein Lysine Methyltransferase SMYD2 in complex with LLY-507, a Cell-Active, Potent and Selective Inhibitor
Descriptor: 5-cyano-2'-{4-[2-(3-methyl-1H-indol-1-yl)ethyl]piperazin-1-yl}-N-[3-(pyrrolidin-1-yl)propyl]biphenyl-3-carboxamide, GLYCEROL, N-lysine methyltransferase SMYD2, ...
Authors:Nguyen, H, Allali-Hassani, A, Antonysamy, S, Chang, S, Chen, L.H, Curtis, C, Emtage, S, Fan, L, Gheyi, T, Li, F, Liu, S, Martin, J.R, Mendel, D, Olsen, J.B, Pelletier, L, Shatseva, T, Wu, S, Zhang, F.F, Arrowsmith, C.H, Brown, P.J, Campbell, R.M, Garcia, B.A, Barsyte-Lovejoy, D, Mader, M, Vedadi, M.
Deposit date:2014-11-04
Release date:2015-04-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:LLY-507, a Cell-active, Potent, and Selective Inhibitor of Protein-lysine Methyltransferase SMYD2.
J.Biol.Chem., 290, 2015
3HV4
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BU of 3hv4 by Molmil
Human p38 MAP Kinase in Complex with RL51
Descriptor: 1-{3-[(6-aminoquinolin-4-yl)amino]phenyl}-3-[3-tert-butyl-1-(4-methylphenyl)-1H-pyrazol-5-yl]urea, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Mitogen-activated protein kinase 14, ...
Authors:Gruetter, C, Simard, J.R, Getlik, M, Rauh, D.
Deposit date:2009-06-15
Release date:2009-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Displacement assay for the detection of stabilizers of inactive kinase conformations.
J.Med.Chem., 53, 2010
4X3G
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BU of 4x3g by Molmil
Crystal structure of SIAH1 SINA domain in complex with a USP19 peptide
Descriptor: E3 ubiquitin-protein ligase SIAH1, Ubiquitin carboxyl-terminal hydrolase 19, ZINC ION
Authors:Walker, J.R, Dong, A, Zhang, Q, Huang, X, Li, Y, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Tong, Y, Structural Genomics Consortium (SGC)
Deposit date:2014-11-28
Release date:2014-12-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Crystal structure of SIAH1 SINA domain in complex with a USP19 peptide
To be published
4YBO
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BU of 4ybo by Molmil
Structure of Citrate Synthase from the Thermoacidophilic Euryarchaeon Thermolasma acidophilum
Descriptor: BICARBONATE ION, Citrate synthase
Authors:Murphy, J.R, Donini, S, Kappock, T.J.
Deposit date:2015-02-19
Release date:2015-09-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.179 Å)
Cite:An active site-tail interaction in the structure of hexahistidine-tagged Thermoplasma acidophilum citrate synthase.
Acta Crystallogr F Struct Biol Commun, 71, 2015
6H9Z
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BU of 6h9z by Molmil
Molecular bases of histo-blood group antigen recognition by the most common human rotavirus
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Outer capsid protein VP4, SULFATE ION
Authors:Ciges-Tomas, J.R, Gozalbo-Rovira, R, Vila-Vicent, S, Buesa, J, Santiso-Bellon, C, Monedero, V, Yebra, M.J, Rodriguez-Diaz, J, Marina, A.
Deposit date:2018-08-06
Release date:2019-06-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens.
Plos Pathog., 15, 2019
3I0M
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BU of 3i0m by Molmil
Structure of the S. pombe Nbs1 FHA/BRCT-repeat domain
Descriptor: DNA repair and telomere maintenance protein nbs1, GLYCEROL
Authors:Clapperton, J.A, Lloyd, J, Chapman, J.R, Jackson, S.P, Smerdon, S.J.
Deposit date:2009-06-25
Release date:2009-10-13
Last modified:2012-05-02
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A supramodular FHA/BRCT-repeat architecture mediates Nbs1 adaptor function in response to DNA damage
Cell(Cambridge,Mass.), 139, 2009
6H9W
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BU of 6h9w by Molmil
Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens
Descriptor: CITRIC ACID, ISOPROPYL ALCOHOL, Outer capsid protein VP4, ...
Authors:Ciges-Tomas, J.R, Gozalbo-Rovira, R, Vila-Vicent, S, Buesa, J, Santiso-Bellon, C, Monedero, V, Yebra, M.J, Rodriguez-Diaz, J, Marina, A.
Deposit date:2018-08-06
Release date:2019-06-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens.
Plos Pathog., 15, 2019
6HA0
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BU of 6ha0 by Molmil
Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens
Descriptor: Outer capsid protein VP4, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Ciges-Tomas, J.R, Gozalbo-Rovira, R, Vila-Vicent, S, Buesa, J, Santiso-Bellon, C, Monedero, V, Yebra, M.J, Rodriguez-Diaz, J, Marina, A.
Deposit date:2018-08-06
Release date:2019-06-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens.
Plos Pathog., 15, 2019
1H91
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BU of 1h91 by Molmil
The crystal structure of lobster apocrustacyanin A1 using softer X-rays.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CRUSTACYANIN A1 SUBUNIT
Authors:Cianci, M, Rizkallah, P.J, Olczak, A, Raftery, J, Chayen, N.E, Zagalsky, P.F, Helliwell, J.R.
Deposit date:2001-02-21
Release date:2001-09-06
Last modified:2019-05-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of Lobster Apocrustacyanin A1 Using Softer X-Rays
Acta Crystallogr.,Sect.D, 57, 2001
3ICT
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BU of 3ict by Molmil
Crystal structure of reduced Bacillus anthracis CoADR-RHD
Descriptor: ADENOSINE-5'-DIPHOSPHATE, COENZYME A, Coenzyme A-Disulfide Reductase, ...
Authors:Wallen, J.R, Claiborne, A.
Deposit date:2009-07-18
Release date:2009-11-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure and catalytic properties of Bacillus anthracis CoADR-RHD: implications for flavin-linked sulfur trafficking.
Biochemistry, 48, 2009
3IW7
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BU of 3iw7 by Molmil
Human p38 MAP Kinase in Complex with an Imidazo-pyridine
Descriptor: 2-({4-[(4-benzylpiperidin-1-yl)carbonyl]benzyl}sulfanyl)-3H-imidazo[4,5-c]pyridine, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
Authors:Gruetter, C, Simard, J.R, Rauh, D.
Deposit date:2009-09-02
Release date:2009-11-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:High-Throughput Screening To Identify Inhibitors Which Stabilize Inactive Kinase Conformations in p38alpha
J.Am.Chem.Soc., 131, 2009
3ICW
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BU of 3icw by Molmil
Structure of a Circular Permutation on Lipase B from Candida Antartica with Bound Suicide Inhibitor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Lipase B, PHOSPHATE ION, ...
Authors:Horton, J.R, Qian, Z, Jia, D, Lutz, S.A, Cheng, X.
Deposit date:2009-07-18
Release date:2009-10-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structural redesign of lipase B from Candida antarctica by circular permutation and incremental truncation.
J.Mol.Biol., 393, 2009
6H2J
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BU of 6h2j by Molmil
Crystal structure of the HsdR subunit of the EcoR124I restriction enzyme with the C-terminal domain
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Type I restriction enzyme R Protein
Authors:Grinkevich, P, Mesters, J.R, Ettrich, R.H.
Deposit date:2018-07-13
Release date:2018-08-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of a novel domain of the motor subunit of the Type I restriction enzyme EcoR124 involved in complex assembly and DNA binding.
J. Biol. Chem., 293, 2018
3FZU
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BU of 3fzu by Molmil
IgG1 Fab characterized by H/D exchange
Descriptor: immunoglobulin IgG1 Fab, heavy chain, light chain
Authors:Arndt, J, Houde, D, Domeier, W, Berkowitz, S, Engen, J.R.
Deposit date:2009-01-26
Release date:2009-03-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Characterization of IgG1 conformation and conformational dynamics by hydrogen/deuterium exchange mass spectrometry.
Anal Chem, 81, 2009
4WVE
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BU of 4wve by Molmil
Crystal structure of the Staphylococcus aureus SasG G52-E2-G53 module
Descriptor: CHLORIDE ION, Surface protein G
Authors:Whelan, F, Potts, J.R.
Deposit date:2014-11-05
Release date:2015-06-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Cooperative folding of intrinsically disordered domains drives assembly of a strong elongated protein.
Nat Commun, 6, 2015
3GCP
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BU of 3gcp by Molmil
Human P38 MAP Kinase in Complex with SB203580
Descriptor: 4-[5-(4-FLUORO-PHENYL)-2-(4-METHANESULFINYL-PHENYL)-3H-IMIDAZOL-4-YL]-PYRIDINE, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
Authors:Gruetter, C, Simard, J.R, Rauh, D.
Deposit date:2009-02-22
Release date:2009-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Development of a fluorescent-tagged kinase assay system for the detection and characterization of allosteric kinase inhibitors.
J.Am.Chem.Soc., 131, 2009
3GJ7
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BU of 3gj7 by Molmil
Crystal structure of human RanGDP-Nup153ZnF12 complex
Descriptor: GTP-binding nuclear protein Ran, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Partridge, J.R, Schwartz, T.U.
Deposit date:2009-03-07
Release date:2009-08-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystallographic and Biochemical Analysis of the Ran-binding Zinc Finger Domain.
J.Mol.Biol., 391, 2009
3GJ1
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BU of 3gj1 by Molmil
Non photoactivated state of PA-GFP
Descriptor: CHLORIDE ION, Green fluorescent protein, SULFATE ION
Authors:Henderson, J.N, Gepshtein, R, Heenan, J.R, Kallio, K, Huppert, D, Remington, S.J.
Deposit date:2009-03-07
Release date:2009-03-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and mechanism of the photoactivatable green fluorescent protein.
J.Am.Chem.Soc., 131, 2009
6K33
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BU of 6k33 by Molmil
Structure of PSI-isiA supercomplex from Thermosynechococcus vulcanus
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Akita, F, Nagao, R, Kato, K, Shen, J.R, Miyazaki, N.
Deposit date:2019-05-16
Release date:2020-05-20
Last modified:2020-05-27
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:Structure of a cyanobacterial photosystem I surrounded by octadecameric IsiA antenna proteins.
Commun Biol, 3, 2020
4WKY
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BU of 4wky by Molmil
Streptomcyes albus JA3453 oxazolomycin ketosynthase domain OzmN KS2
Descriptor: 1,2-ETHANEDIOL, Beta-ketoacyl synthase, GLYCEROL, ...
Authors:Cuff, M.E, Mack, J.C, Endres, M, Babnigg, G, Bingman, C.A, Yennamalli, R, Lohman, J.R, Ma, M, Shen, B, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2014-10-03
Release date:2014-10-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and evolutionary relationships of "AT-less" type I polyketide synthase ketosynthases.
Proc.Natl.Acad.Sci.USA, 112, 2015
3GCX
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BU of 3gcx by Molmil
PCSK9:EGFA (pH 7.4)
Descriptor: CALCIUM ION, Low-density lipoprotein receptor, Proprotein convertase subtilisin/kexin type 9
Authors:McNutt, M.C, Kwon, H.J, Chen, C, Chen, J.R, Horton, J.D, Lagace, T.A.
Deposit date:2009-02-22
Release date:2009-03-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Antagonism of Secreted PCSK9 Increases Low Density Lipoprotein Receptor Expression in HepG2 Cells.
J.Biol.Chem., 284, 2009

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