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PDB: 2886 件

4ELL
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Structure of the inactive retinoblastoma protein pocket domain
分子名称: Retinoblastoma-associated protein
著者Burke, J.R, Rubin, S.M.
登録日2012-04-10
公開日2012-05-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structures of inactive retinoblastoma protein reveal multiple mechanisms for cell cycle control.
Genes Dev., 26, 2012
4EW5
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BU of 4ew5 by Molmil
C-terminal domain of inner membrane protein CigR from Salmonella enterica.
分子名称: 1,2-ETHANEDIOL, CigR Protein
著者Osipiuk, J, Xu, X, Cui, H, Brown, R.N, Cort, J.R, Heffron, F, Nakayasu, E.S, Niemann, G.S, Merkley, E.D, Savchenko, A, Adkins, J.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Program for the Characterization of Secreted Effector Proteins (PCSEP)
登録日2012-04-26
公開日2012-05-23
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献C-terminal domain of inner membrane protein CigR from Salmonella enterica.
To be Published
4EQW
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BU of 4eqw by Molmil
Crystal Structure of the Y361F, Y419F Mutant of Staphylococcus aureus CoADR
分子名称: CHLORIDE ION, COENZYME A, Coenzyme A disulfide reductase, ...
著者Edwards, J.S, Wallace, B.D, Wallen, J.R, Claiborne, A, Redinbo, M.R.
登録日2012-04-19
公開日2012-10-17
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Turnover-Dependent Covalent Inactivation of Staphylococcus aureus Coenzyme A-Disulfide Reductase by Coenzyme A-Mimetics: Mechanistic and Structural Insights.
Biochemistry, 51, 2012
6DF6
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BU of 6df6 by Molmil
Crystal structure of estrogen receptor alpha in complex with receptor degrader 16ab
分子名称: (8R)-8-(4-{2-[3-(fluoromethyl)azetidin-1-yl]ethoxy}phenyl)-1,8-dihydro-2H-[1]benzopyrano[4,3-d][1]benzoxepine-5,11-diol, Estrogen receptor, GLYCEROL
著者Kiefer, J.R, Vinogradova, M, Liang, J, Zhang, B, Ortwine, D.F, Nettles, K.W, Nwachukwu, J.C.
登録日2018-05-14
公開日2019-02-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Unexpected equivalent potency of a constrained chromene enantiomeric pair rationalized by co-crystal structures in complex with estrogen receptor alpha.
Bioorg. Med. Chem. Lett., 29, 2019
6DFJ
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BU of 6dfj by Molmil
Crystal structure of anti-Zika antibody Z021 bound to DENV-1 envelope protein DIII
分子名称: Dengue 1 Envelope DIII domain, anti-Zika antibody Z021, Heavy Chain, ...
著者Keeffe, J.R, Bjorkman, P.J.
登録日2018-05-14
公開日2018-10-24
最終更新日2018-11-14
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献A Combination of Two Human Monoclonal Antibodies Prevents Zika Virus Escape Mutations in Non-human Primates.
Cell Rep, 25, 2018
6DFN
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BU of 6dfn by Molmil
Crystal structure of estrogen receptor alpha in complex with receptor degrader 16aa
分子名称: (2S)-3-(3-hydroxyphenyl)-2-(4-iodophenyl)-4-methyl-2H-1-benzopyran-6-ol, (8S)-8-(4-{2-[3-(fluoromethyl)azetidin-1-yl]ethoxy}phenyl)-1,8-dihydro-2H-[1]benzopyrano[4,3-d][1]benzoxepine-5,11-diol, Estrogen receptor, ...
著者Kiefer, J.R, Vinogradova, M, Liang, J, Zhang, B, Ortwine, D.F, Nettles, K.W, Nwachukwu, J.C.
登録日2018-05-15
公開日2019-02-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Unexpected equivalent potency of a constrained chromene enantiomeric pair rationalized by co-crystal structures in complex with estrogen receptor alpha.
Bioorg. Med. Chem. Lett., 29, 2019
1AKX
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BU of 1akx by Molmil
HIV-2 TRANS ACTIVATING REGION RNA COMPLEX WITH ARGININAMIDE, NMR, MINIMIZED AVERAGE STRUCTURE
分子名称: ARGININE, TAR RNA
著者Brodsky, A.S, Williamson, J.R.
登録日1997-05-27
公開日1997-11-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the HIV-2 TAR-argininamide complex.
J.Mol.Biol., 267, 1997
1AJU
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BU of 1aju by Molmil
HIV-2 TAR-ARGININAMIDE COMPLEX, NMR, 20 STRUCTURES
分子名称: ARGININE, TAR RNA
著者Brodsky, A.S, Williamson, J.R.
登録日1997-05-10
公開日1997-12-17
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the HIV-2 TAR-argininamide complex.
J.Mol.Biol., 267, 1997
1XO1
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BU of 1xo1 by Molmil
T5 5'-EXONUCLEASE MUTANT K83A
分子名称: 5'-EXONUCLEASE
著者Ceska, T.A, Suck, D, Sayers, J.R.
登録日1998-11-19
公開日1999-04-02
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mutagenesis of conserved lysine residues in bacteriophage T5 5'-3' exonuclease suggests separate mechanisms of endo-and exonucleolytic cleavage.
Proc.Natl.Acad.Sci.USA, 96, 1999
6PFM
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BU of 6pfm by Molmil
Crystal structure of GDC-0927 bound to estrogen receptor alpha
分子名称: (2S)-2-(4-{2-[3-(fluoromethyl)azetidin-1-yl]ethoxy}phenyl)-3-(3-hydroxyphenyl)-4-methyl-2H-1-benzopyran-6-ol, Estrogen receptor
著者Kiefer, J.R, Vinogradova, M, Liang, J, Zhang, B, Wang, X, Zbieg, J.R, Labadie, S.S, Li, J, Ray, N.C, Ortwine, D.
登録日2019-06-21
公開日2019-07-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Discovery of a C-8 hydroxychromene as a potent degrader of estrogen receptor alpha with improved rat oral exposure over GDC-0927.
Bioorg.Med.Chem.Lett., 29, 2019
5HML
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BU of 5hml by Molmil
Crystal Structure of T5 D15 Protein Co-crystallized with Metal Ions
分子名称: 1,2-ETHANEDIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
著者Flemming, C.S, Feng, M, Sedelnikova, S.E, Zhang, J, Rafferty, J.B, Sayers, J.R, Artymiuk, P.J.
登録日2016-01-16
公開日2016-06-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.482 Å)
主引用文献Direct observation of DNA threading in flap endonuclease complexes.
Nat.Struct.Mol.Biol., 23, 2016
5HLL
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BU of 5hll by Molmil
Re-refinement of 4g4a: room-temperature X-ray diffraction study of cisplatin and its binding to His15 of HEWL after 14 months chemical exposure in the presence of DMSO.
分子名称: AMMONIA, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
著者Helliwell, J.R.
登録日2016-01-15
公開日2016-03-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Re-refinement of 4g4a: room-temperature X-ray diffraction study of cisplatin and its binding to His15 of HEWL after 14 months chemical exposure in the presence of DMSO.
Acta Crystallogr F Struct Biol Commun, 72, 2016
5HMM
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BU of 5hmm by Molmil
Crystal Structure of T5 D15 Protein Co-crystallized with Metal Ions
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Exodeoxyribonuclease, ...
著者Flemming, C.S, Sedelnikova, S.E, Rafferty, J.B, Sayers, J.R, Artymiuk, P.J.
登録日2016-01-16
公開日2016-06-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Direct observation of DNA threading in flap endonuclease complexes.
Nat.Struct.Mol.Biol., 23, 2016
5HYN
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BU of 5hyn by Molmil
Structure of Human Polycomb Repressive Complex 2 (PRC2) with oncogenic histone H3K27M peptide
分子名称: H3K27M, Histone-lysine N-methyltransferase EZH2, JARID2 K116me3, ...
著者Zhang, Y, Justin, N, Wilson, J.R, Gamblin, S.J.
登録日2016-02-01
公開日2016-05-11
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structural basis of oncogenic histone H3K27M inhibition of human polycomb repressive complex 2.
Nat Commun, 7, 2016
5HVY
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BU of 5hvy by Molmil
CDK8/CYCC IN COMPLEX WITH COMPOUND 20
分子名称: CHLORIDE ION, Cyclin-C, Cyclin-dependent kinase 8, ...
著者Kiefer, J.R, Schneider, E.V, Maskos, K, Bergeron, P, Koehler, M.
登録日2016-01-28
公開日2016-04-20
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Design and Development of a Series of Potent and Selective Type II Inhibitors of CDK8.
Acs Med.Chem.Lett., 7, 2016
5HP4
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BU of 5hp4 by Molmil
Crystal structure bacteriohage T5 D15 flap endonuclease (D155K) pseudo-enzyme-product complex with DNA and metal ions
分子名称: CALCIUM ION, DNA (5'-D(*GP*AP*TP*CP*TP*AP*TP*AP*TP*GP*CP*CP*AP*TP*CP*GP*G)-3'), Exodeoxyribonuclease, ...
著者Almalki, F.A, Zhang, J, Sedelnikova, S.E, Rafferty, J.B, Sayers, J.R, Artymiuk, P.A.
登録日2016-01-20
公開日2016-06-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Direct observation of DNA threading in flap endonuclease complexes.
Nat.Struct.Mol.Biol., 23, 2016
5I4E
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BU of 5i4e by Molmil
Crystal Structure of Human Nonmuscle Myosin 2C motor domain
分子名称: ADP ORTHOVANADATE, MAGNESIUM ION, Myosin-14,Alpha-actinin A
著者Chinthalapudi, K, Heissler, S.M, Preller, M, Sellers, J.R, Manstein, D.J.
登録日2016-02-11
公開日2017-09-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Mechanistic insights into the active site and allosteric communication pathways in human nonmuscle myosin-2C.
Elife, 6, 2017
5I5Q
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BU of 5i5q by Molmil
Re refinement of 4mwn.
分子名称: DIMETHYL SULFOXIDE, Lysozyme C, NITRATE ION, ...
著者Helliwell, J.R.
登録日2016-02-15
公開日2016-05-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Comment on "Structural dynamics of cisplatin binding to histidine in a protein" [Struct. Dyn. 1, 034701 (2014)].
Struct Dyn, 3, 2016
5I6U
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BU of 5i6u by Molmil
The crystal structure of PI3Kdelta with compound 32
分子名称: 2-[(1S)-1-({6-amino-5-[(1H-pyrazol-4-yl)ethynyl]pyrimidin-4-yl}amino)ethyl]-5-chloro-3-phenylquinazolin-4(3H)-one, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform
著者Somoza, J.R, Villasenor, A.G.
登録日2016-02-16
公開日2017-02-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.842 Å)
主引用文献The crystal structure of PI3Kdelta with compound 32
To Be Published
5M0Z
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BU of 5m0z by Molmil
Cyclohexanone Monooxygenase from T. municipale: reduced enzyme bound to NADP+
分子名称: Cyclohexanone Monooxygenase from Thermocrispum municipale., FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
著者Gomez-Castellanos, J.R, Mattevi, A.
登録日2016-10-06
公開日2016-12-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Characterization and Crystal Structure of a Robust Cyclohexanone Monooxygenase.
Angew. Chem. Int. Ed. Engl., 55, 2016
5M1Y
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The case of 1lkr held at the PDB and its variable amino acid occupancies; re refinement of 4ow9 to correct this
分子名称: CHLORIDE ION, DIMETHYL SULFOXIDE, IODIDE ION, ...
著者Helliwell, J.R.
登録日2016-10-11
公開日2016-10-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.904 Å)
主引用文献The case of 1lkr held at the PDB and its variable amino acid occupancies; re refinement of 4ow9 to correct this
Zenodo, 2016
5M10
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Crystal structure of cyclohexanone monooxygenase from Thermocrispum municipale in the oxidised state with a bound nicotinamide.
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cyclohexanone Monooxygenase from Thermocrispum municipale, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Gomez-Castellanos, J.R, Mattevi, A.
登録日2016-10-06
公開日2016-12-07
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Characterization and Crystal Structure of a Robust Cyclohexanone Monooxygenase.
Angew. Chem. Int. Ed. Engl., 55, 2016
6ZSP
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Human serine racemase bound to ATP and malonate.
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ...
著者Koulouris, C.R, Bax, B.D, Roe, S.M, Atack, J.R.
登録日2020-07-16
公開日2021-03-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Tyrosine 121 moves revealing a ligandable pocket that couples catalysis to ATP-binding in serine racemase.
Commun Biol, 5, 2022
6ZUJ
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BU of 6zuj by Molmil
Human serine racemase holoenzyme from 20% DMSO soak (XChem crystallographic fragment screen).
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, DIMETHYL SULFOXIDE, ...
著者Koulouris, C.R, Bax, B.D, Roe, S.M, Atack, J.R.
登録日2020-07-23
公開日2021-03-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Tyrosine 121 moves revealing a ligandable pocket that couples catalysis to ATP-binding in serine racemase.
Commun Biol, 5, 2022
6PET
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BU of 6pet by Molmil
Crystal structure of 8-hydroxychromene compound 30 bound to estrogen receptor alpha
分子名称: (2S)-2-(4-{2-[3-(fluoromethyl)azetidin-1-yl]ethoxy}phenyl)-3-(3-hydroxyphenyl)-4-methyl-2H-1-benzopyran-8-ol, (2S)-3-(3-hydroxyphenyl)-2-(4-iodophenyl)-4-methyl-2H-1-benzopyran-6-ol, CHLORIDE ION, ...
著者Kiefer, J.R, Vinogradova, M, Liang, J, Wang, X, Zbieg, J, Labadie, S.S, Zhang, B, Li, J, Liang, W.
登録日2019-06-20
公開日2019-07-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.203 Å)
主引用文献Discovery of a C-8 hydroxychromene as a potent degrader of estrogen receptor alpha with improved rat oral exposure over GDC-0927.
Bioorg.Med.Chem.Lett., 29, 2019

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