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PDB: 3272 件

7SFG
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Human DNMT1(729-1600) Bound to Zebularine-Containing 12mer dsDNA and Cofactor SAM
分子名称: 1,2-ETHANEDIOL, DNA (cytosine-5)-methyltransferase 1, DNA Strand 1, ...
著者Horton, J.R, Pathuri, S, Cheng, X.
登録日2021-10-03
公開日2022-03-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Structural characterization of dicyanopyridine containing DNMT1-selective, non-nucleoside inhibitors.
Structure, 30, 2022
7SFE
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Human DNMT1(729-1600) Bound to Zebularine-Containing 12mer dsDNA and Inhibitor GSK3830334A
分子名称: (2R)-2-{[6-(4-aminopiperidin-1-yl)-3,5-dicyano-4-ethylpyridin-2-yl]amino}-2-phenylacetamide, 1,2-ETHANEDIOL, DNA (12-MER), ...
著者Horton, J.R, Pathuri, S, Cheng, X.
登録日2021-10-03
公開日2022-03-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural characterization of dicyanopyridine containing DNMT1-selective, non-nucleoside inhibitors.
Structure, 30, 2022
1UD7
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SOLUTION STRUCTURE OF THE DESIGNED HYDROPHOBIC CORE MUTANT OF UBIQUITIN, 1D7
分子名称: PROTEIN (UBIQUITIN CORE MUTANT 1D7)
著者Johnson, E.C, Lazar, G.A, Desjarlais, J.R, Handel, T.M.
登録日1999-04-07
公開日1999-05-06
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure and dynamics of a designed hydrophobic core variant of ubiquitin.
Structure Fold.Des., 7, 1999
3RIJ
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BU of 3rij by Molmil
Epitope backbone grafting by computational design for improved presentation of linear epitopes on scaffold proteins
分子名称: GLYCEROL, SC_2cx5
著者Azoitei, M.L, Ban, Y.A, Julien, J.P, Bryson, S, Schroeter, A, Kalyuzhniy, O, Porter, J.R, Adachi, Y, Baker, D, Szabo, E, Pai, E.F, Schief, W.R.
登録日2011-04-13
公開日2011-11-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Computational design of high-affinity epitope scaffolds by backbone grafting of a linear epitope.
J.Mol.Biol., 415, 2012
1S98
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E.coli IscA crystal structure to 2.3 A
分子名称: Protein yfhF
著者Cupp-Vickery, J.R, Silberg, J.J, Ta, D.T, Vickery, L.E.
登録日2004-02-03
公開日2004-06-01
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of IscA, an iron-sulfur cluster assembly protein from Escherichia coli.
J.Mol.Biol., 338, 2004
3QXY
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Human SETD6 in complex with RelA Lys310
分子名称: 1,2-ETHANEDIOL, N-lysine methyltransferase SETD6, S-ADENOSYLMETHIONINE, ...
著者Chang, Y, Levy, D, Horton, J.R, Peng, J, Zhang, X, Gozani, O, Cheng, X.
登録日2011-03-02
公開日2011-05-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structural basis of SETD6-mediated regulation of the NF-kB network via methyl-lysine signaling.
Nucleic Acids Res., 39, 2011
3QXW
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BU of 3qxw by Molmil
Free structure of an anti-methotrexate CDR1-4 Graft VHH Antibody
分子名称: Anti-Methotrexate CDR1-4 Graft VHH, SODIUM ION, SULFATE ION
著者Fanning, S.W, Horn, J.R.
登録日2011-03-02
公開日2011-07-27
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献An anti-hapten camelid antibody reveals a cryptic binding site with significant energetic contributions from a nonhypervariable loop.
Protein Sci., 20, 2011
3QXV
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Structure of an Anti-Methotrexate CDR1-4 Graft VHH Antibody in Complex with Methotrexate
分子名称: Anti-Methotrexate CDR1-4 Graft VHH, METHOTREXATE, SULFATE ION
著者Fanning, S.W, Horn, J.R.
登録日2011-03-02
公開日2011-07-27
最終更新日2013-09-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献An anti-hapten camelid antibody reveals a cryptic binding site with significant energetic contributions from a nonhypervariable loop.
Protein Sci., 20, 2011
1S3Y
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Structure Determination of Tetrahydroquinazoline Antifolates in Complex with Human and Pneumocystis carinii Dihydrofolate Reductase: Correlations of Enzyme Selectivity and Stereochemistry
分子名称: 6-(OCTAHYDRO-1H-INDOL-1-YLMETHYL)DECAHYDROQUINAZOLINE-2,4-DIAMINE, Dihydrofolate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Cody, V, Luft, J.R, Pangborn, W, Gangjee, A, Queener, S.F.
登録日2004-01-14
公開日2004-03-30
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure determination of tetrahydroquinazoline antifolates in complex with human and Pneumocystis carinii dihydrofolate reductase: correlations between enzyme selectivity and stereochemistry.
Acta Crystallogr.,Sect.D, 60, 2004
3PHE
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BU of 3phe by Molmil
HCV NS5B with a bound quinolone inhibitor
分子名称: 4-chlorobenzyl 6-fluoro-7-(4-methylpiperazin-1-yl)-1-[4-(methylsulfonyl)benzyl]-4-oxo-1,4-dihydroquinoline-3-carboxylate, HCV encoded nonstructural 5B protein
著者Somoza, J.R, To, N, Lehoux, I.
登録日2010-11-03
公開日2010-11-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Quinolones as HCV NS5B polymerase inhibitors.
Bioorg.Med.Chem.Lett., 21, 2011
1R2C
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BU of 1r2c by Molmil
PHOTOSYNTHETIC REACTION CENTER BLASTOCHLORIS VIRIDIS (ATCC)
分子名称: 15-cis-1,2-dihydroneurosporene, BACTERIOCHLOROPHYLL B, BACTERIOPHEOPHYTIN B, ...
著者Baxter, R.H, Ponomarenko, N, Pahl, R, Srajer, V, Moffat, K, Norris, J.R.
登録日2003-09-26
公開日2004-04-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Time-resolved crystallographic studies of light-induced structural changes in the photosynthetic reaction center.
Proc.Natl.Acad.Sci.USA, 101, 2004
3Q2P
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BU of 3q2p by Molmil
Reduced sweetness of a monellin (MNEI) mutant results from increased protein flexibility and disruption of a distant poly-(L-proline) II helix
分子名称: Monellin chain B/Monellin chain A chimeric protein, SODIUM ION
著者Templeton, C.M, Hobbs, J.R, Munger, S.D, Conn, G.L.
登録日2010-12-20
公開日2011-04-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.341 Å)
主引用文献Reduced Sweetness of a Monellin (MNEI) Mutant Results from Increased Protein Flexibility and Disruption of a Distant Poly-(L-Proline) II Helix.
Chem Senses, 36, 2011
3Q1D
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BU of 3q1d by Molmil
The B-box domain of Trim54
分子名称: Tripartite motif-containing protein 54, ZINC ION
著者Walker, J.R, Yermekbayeva, L, Mackenzie, F, Dong, A, Weigelt, J, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Dhe-Paganon, S.
登録日2010-12-17
公開日2011-01-26
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The B-Box Domain of Trim54
To be Published
7SIE
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BU of 7sie by Molmil
Structure of AAP A-domain (residues 351-605) from Staphylococcus epidermidis
分子名称: Accumulation associated protein, CALCIUM ION, CHLORIDE ION
著者Atkin, K.E, Brentnall, A.S, Dodson, E.J, Whelan, F, Clark, L, Turkenburg, J.P, Potts, J.R.
登録日2021-10-13
公開日2022-10-19
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Staphylococcal Periscope proteins Aap, SasG, and Pls project noncanonical legume-like lectin adhesin domains from the bacterial surface.
J.Biol.Chem., 299, 2023
7SJK
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BU of 7sjk by Molmil
Structure of PLS A-domain (residues 391-656) from Staphylococcus aureus
分子名称: CALCIUM ION, Pls Plasmin sensitive surface protein
著者Clark, L, Whelan, F, Atkin, K.E, Brentnall, A.S, Dodson, E.J, Turkenburg, J.P, Potts, J.R.
登録日2021-10-18
公開日2022-10-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.208 Å)
主引用文献Staphylococcal Periscope proteins Aap, SasG, and Pls project noncanonical legume-like lectin adhesin domains from the bacterial surface.
J.Biol.Chem., 299, 2023
1U35
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BU of 1u35 by Molmil
Crystal structure of the nucleosome core particle containing the histone domain of macroH2A
分子名称: H2A histone family, Hist1h4i protein, Histone H3.1, ...
著者Chakravarthy, S, Gundimella, S.K, Caron, C, Perche, P.Y, Pehrson, J.R, Khochbin, S, Luger, K.
登録日2004-07-20
公開日2005-09-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural characterization of the histone variant macroH2A.
Mol.Cell.Biol., 25, 2005
3QSK
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BU of 3qsk by Molmil
5 Histidine Variant of the anti-RNase A VHH in Complex with RNAse A
分子名称: Engineered 5 Histidine anti-RNase A Camelid VHH Antibody Domain Variant, Ribonuclease pancreatic
著者Murtaugh, M.L, Fanning, S.W, Sharma, T.M, Terry, A.M, Horn, J.R.
登録日2011-02-21
公開日2011-08-10
最終更新日2011-11-30
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A combinatorial histidine scanning library approach to engineer highly pH-dependent protein switches.
Protein Sci., 20, 2011
7SMH
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BU of 7smh by Molmil
Structure of SASG A-domain (residues 163-419) from Staphylococcus aureus
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Surface protein G
著者Atkin, K.E, Whelan, F, Brentnall, A.S, Dodson, E.J, Turkenburg, J.P, Potts, J.R.
登録日2021-10-25
公開日2022-11-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Staphylococcal Periscope proteins Aap, SasG, and Pls project noncanonical legume-like lectin adhesin domains from the bacterial surface.
J.Biol.Chem., 299, 2023
1U00
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BU of 1u00 by Molmil
HscA substrate binding domain complexed with the IscU recognition peptide ELPPVKIHC
分子名称: Chaperone protein hscA, IscU recognition peptide
著者Cupp-Vickery, J.R, Peterson, J.C, Ta, D.T, Vickery, L.E.
登録日2004-07-12
公開日2004-10-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal Structure of the Molecular Chaperone HscA Substrate Binding Domain Complexed with the IscU Recognition Peptide ELPPVKIHC.
J.Mol.Biol., 342, 2004
1RYK
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BU of 1ryk by Molmil
Solution NMR Structure Protein yjbJ from Escherichia coli. Northeast Structural Genomics Consortium Target ET93; Ontario Centre for Structural Proteomics target EC0298_1_69;
分子名称: Protein yjbJ
著者Pineda-Lucena, A, Liao, J, Wu, B, Yee, A, Cort, J.R, Kennedy, M.A, Edwards, A.M, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG)
登録日2003-12-22
公開日2004-02-24
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献An NMR approach to structural proteomics.
Proteins, 47, 2002
3RCO
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BU of 3rco by Molmil
Crystal structure of a conserved motif in human TDRD7
分子名称: CHLORIDE ION, Tudor domain-containing protein 7
著者Dong, A, Xu, C, Walker, J.R, Lam, R, Guo, Y, Bian, C, Li, Y, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2011-03-31
公開日2012-04-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of a conserved motif in human TDRD7
To be Published
1S44
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The structure and refinement of apocrustacyanin C2 to 1.6A resolution and the search for differences between this protein and the homologous apoproteins A1 and C1.
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Crustacyanin A1 subunit, GLYCEROL, ...
著者Habash, J, Helliwell, J.R, Raftery, J, Cianci, M, Rizkallah, P.J, Chayen, N.E, Nneji, G.A, Zagalsky, P.F.
登録日2004-01-15
公開日2004-04-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The structure and refinement of apocrustacyanin C2 to 1.3 A resolution and the search for differences between this protein and the homologous apoproteins A1 and C1.
Acta Crystallogr.,Sect.D, 60, 2004
1RYJ
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Solution NMR Structure of Protein Mth1743 from Methanobacterium thermoautotrophicum. Ontario Centre for Structural Proteomics target MTH1743_1_70; Northeast Structural Genomics Consortium Target TT526.
分子名称: unknown
著者Yee, A, Chang, X, Pineda-Lucena, A, Wu, B, Semesi, A, Le, B, Ramelot, T, Lee, G.M, Bhattacharyya, S, Gutierrez, P, Denisov, A, Lee, C.H, Cort, J.R, Kozlov, G, Liao, J, Finak, G, Chen, L, Wishart, D, Lee, W, McIntosh, L.P, Gehring, K, Kennedy, M.A, Edwards, A.M, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG)
登録日2003-12-22
公開日2004-02-24
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献AN NMR APPROACH TO STRUCTURAL PROTEOMICS
Proc.Natl.Acad.Sci.USA, 99, 2002
1S3U
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Structure Determination of Tetrahydroquinazoline Antifolates in Complex with Human and Pneumocystis carinii Dihydrofolate Reductase: Correlations of Enzyme Selectivity and Stereochemistry
分子名称: (2R,6S)-6-{[methyl(3,4,5-trimethoxyphenyl)amino]methyl}-1,2,5,6,7,8-hexahydroquinazoline-2,4-diamine, Dihydrofolate reductase, SULFATE ION
著者Cody, V, Luft, J.R, Pangborn, W, Gangjee, A, Queener, S.F.
登録日2004-01-14
公開日2004-03-30
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure determination of tetrahydroquinazoline antifolates in complex with human and Pneumocystis carinii dihydrofolate reductase: correlations between enzyme selectivity and stereochemistry.
Acta Crystallogr.,Sect.D, 60, 2004
3RVG
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BU of 3rvg by Molmil
Crystals structure of Jak2 with a 1-amino-5H-pyrido[4,3-b]indol-4-carboxamide inhibitor
分子名称: 1-(cyclohexylamino)-7-(1-methyl-1H-pyrazol-4-yl)-5H-pyrido[4,3-b]indole-4-carboxamide, Tyrosine-protein kinase JAK2
著者Lim, J, Taoka, B, Otte, R.D, Spencer, K, Dinsmore, C.J, Altman, M.D, Chan, G, Rosenstein, C, Sharma, S, Su, H.P, Szewczak, A.A, Xu, L, Yin, H, Zugay-Murphy, J, Marshall, C.G, Young, J.R.
登録日2011-05-06
公開日2012-03-21
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.498 Å)
主引用文献Discovery of 1-amino-5H-pyrido[4,3-b]indol-4-carboxamide inhibitors of Janus kinase 2 (JAK2) for the treatment of myeloproliferative disorders.
J.Med.Chem., 54, 2011

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件を2024-07-10に公開中

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