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PDB: 3278 件

4YBO
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Structure of Citrate Synthase from the Thermoacidophilic Euryarchaeon Thermolasma acidophilum
分子名称: BICARBONATE ION, Citrate synthase
著者Murphy, J.R, Donini, S, Kappock, T.J.
登録日2015-02-19
公開日2015-09-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.179 Å)
主引用文献An active site-tail interaction in the structure of hexahistidine-tagged Thermoplasma acidophilum citrate synthase.
Acta Crystallogr F Struct Biol Commun, 71, 2015
6H9Z
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Molecular bases of histo-blood group antigen recognition by the most common human rotavirus
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Outer capsid protein VP4, SULFATE ION
著者Ciges-Tomas, J.R, Gozalbo-Rovira, R, Vila-Vicent, S, Buesa, J, Santiso-Bellon, C, Monedero, V, Yebra, M.J, Rodriguez-Diaz, J, Marina, A.
登録日2018-08-06
公開日2019-06-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens.
Plos Pathog., 15, 2019
3I0M
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Structure of the S. pombe Nbs1 FHA/BRCT-repeat domain
分子名称: DNA repair and telomere maintenance protein nbs1, GLYCEROL
著者Clapperton, J.A, Lloyd, J, Chapman, J.R, Jackson, S.P, Smerdon, S.J.
登録日2009-06-25
公開日2009-10-13
最終更新日2012-05-02
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A supramodular FHA/BRCT-repeat architecture mediates Nbs1 adaptor function in response to DNA damage
Cell(Cambridge,Mass.), 139, 2009
6H9W
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BU of 6h9w by Molmil
Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens
分子名称: CITRIC ACID, ISOPROPYL ALCOHOL, Outer capsid protein VP4, ...
著者Ciges-Tomas, J.R, Gozalbo-Rovira, R, Vila-Vicent, S, Buesa, J, Santiso-Bellon, C, Monedero, V, Yebra, M.J, Rodriguez-Diaz, J, Marina, A.
登録日2018-08-06
公開日2019-06-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens.
Plos Pathog., 15, 2019
6HA0
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Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens
分子名称: Outer capsid protein VP4, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Ciges-Tomas, J.R, Gozalbo-Rovira, R, Vila-Vicent, S, Buesa, J, Santiso-Bellon, C, Monedero, V, Yebra, M.J, Rodriguez-Diaz, J, Marina, A.
登録日2018-08-06
公開日2019-06-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens.
Plos Pathog., 15, 2019
1H91
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The crystal structure of lobster apocrustacyanin A1 using softer X-rays.
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CRUSTACYANIN A1 SUBUNIT
著者Cianci, M, Rizkallah, P.J, Olczak, A, Raftery, J, Chayen, N.E, Zagalsky, P.F, Helliwell, J.R.
登録日2001-02-21
公開日2001-09-06
最終更新日2019-05-22
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure of Lobster Apocrustacyanin A1 Using Softer X-Rays
Acta Crystallogr.,Sect.D, 57, 2001
3ICT
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Crystal structure of reduced Bacillus anthracis CoADR-RHD
分子名称: ADENOSINE-5'-DIPHOSPHATE, COENZYME A, Coenzyme A-Disulfide Reductase, ...
著者Wallen, J.R, Claiborne, A.
登録日2009-07-18
公開日2009-11-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure and catalytic properties of Bacillus anthracis CoADR-RHD: implications for flavin-linked sulfur trafficking.
Biochemistry, 48, 2009
3IW7
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Human p38 MAP Kinase in Complex with an Imidazo-pyridine
分子名称: 2-({4-[(4-benzylpiperidin-1-yl)carbonyl]benzyl}sulfanyl)-3H-imidazo[4,5-c]pyridine, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
著者Gruetter, C, Simard, J.R, Rauh, D.
登録日2009-09-02
公開日2009-11-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献High-Throughput Screening To Identify Inhibitors Which Stabilize Inactive Kinase Conformations in p38alpha
J.Am.Chem.Soc., 131, 2009
3ICW
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Structure of a Circular Permutation on Lipase B from Candida Antartica with Bound Suicide Inhibitor
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Lipase B, PHOSPHATE ION, ...
著者Horton, J.R, Qian, Z, Jia, D, Lutz, S.A, Cheng, X.
登録日2009-07-18
公開日2009-10-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Structural redesign of lipase B from Candida antarctica by circular permutation and incremental truncation.
J.Mol.Biol., 393, 2009
6H2J
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Crystal structure of the HsdR subunit of the EcoR124I restriction enzyme with the C-terminal domain
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Type I restriction enzyme R Protein
著者Grinkevich, P, Mesters, J.R, Ettrich, R.H.
登録日2018-07-13
公開日2018-08-08
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of a novel domain of the motor subunit of the Type I restriction enzyme EcoR124 involved in complex assembly and DNA binding.
J. Biol. Chem., 293, 2018
3FZU
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BU of 3fzu by Molmil
IgG1 Fab characterized by H/D exchange
分子名称: immunoglobulin IgG1 Fab, heavy chain, light chain
著者Arndt, J, Houde, D, Domeier, W, Berkowitz, S, Engen, J.R.
登録日2009-01-26
公開日2009-03-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Characterization of IgG1 conformation and conformational dynamics by hydrogen/deuterium exchange mass spectrometry.
Anal Chem, 81, 2009
4WVE
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Crystal structure of the Staphylococcus aureus SasG G52-E2-G53 module
分子名称: CHLORIDE ION, Surface protein G
著者Whelan, F, Potts, J.R.
登録日2014-11-05
公開日2015-06-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Cooperative folding of intrinsically disordered domains drives assembly of a strong elongated protein.
Nat Commun, 6, 2015
3GCP
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Human P38 MAP Kinase in Complex with SB203580
分子名称: 4-[5-(4-FLUORO-PHENYL)-2-(4-METHANESULFINYL-PHENYL)-3H-IMIDAZOL-4-YL]-PYRIDINE, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
著者Gruetter, C, Simard, J.R, Rauh, D.
登録日2009-02-22
公開日2009-06-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Development of a fluorescent-tagged kinase assay system for the detection and characterization of allosteric kinase inhibitors.
J.Am.Chem.Soc., 131, 2009
3GJ7
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BU of 3gj7 by Molmil
Crystal structure of human RanGDP-Nup153ZnF12 complex
分子名称: GTP-binding nuclear protein Ran, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Partridge, J.R, Schwartz, T.U.
登録日2009-03-07
公開日2009-08-04
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Crystallographic and Biochemical Analysis of the Ran-binding Zinc Finger Domain.
J.Mol.Biol., 391, 2009
3GJ1
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Non photoactivated state of PA-GFP
分子名称: CHLORIDE ION, Green fluorescent protein, SULFATE ION
著者Henderson, J.N, Gepshtein, R, Heenan, J.R, Kallio, K, Huppert, D, Remington, S.J.
登録日2009-03-07
公開日2009-03-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure and mechanism of the photoactivatable green fluorescent protein.
J.Am.Chem.Soc., 131, 2009
6K33
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Structure of PSI-isiA supercomplex from Thermosynechococcus vulcanus
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
著者Akita, F, Nagao, R, Kato, K, Shen, J.R, Miyazaki, N.
登録日2019-05-16
公開日2020-05-20
最終更新日2020-05-27
実験手法ELECTRON MICROSCOPY (2.74 Å)
主引用文献Structure of a cyanobacterial photosystem I surrounded by octadecameric IsiA antenna proteins.
Commun Biol, 3, 2020
4WKY
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Streptomcyes albus JA3453 oxazolomycin ketosynthase domain OzmN KS2
分子名称: 1,2-ETHANEDIOL, Beta-ketoacyl synthase, GLYCEROL, ...
著者Cuff, M.E, Mack, J.C, Endres, M, Babnigg, G, Bingman, C.A, Yennamalli, R, Lohman, J.R, Ma, M, Shen, B, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2014-10-03
公開日2014-10-29
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and evolutionary relationships of "AT-less" type I polyketide synthase ketosynthases.
Proc.Natl.Acad.Sci.USA, 112, 2015
3GCX
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PCSK9:EGFA (pH 7.4)
分子名称: CALCIUM ION, Low-density lipoprotein receptor, Proprotein convertase subtilisin/kexin type 9
著者McNutt, M.C, Kwon, H.J, Chen, C, Chen, J.R, Horton, J.D, Lagace, T.A.
登録日2009-02-22
公開日2009-03-03
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Antagonism of Secreted PCSK9 Increases Low Density Lipoprotein Receptor Expression in HepG2 Cells.
J.Biol.Chem., 284, 2009
4YAR
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2-Hydroxyethylphosphonate dioxygenase (HEPD) E176H
分子名称: 2-hydroxyethylphosphonate dioxygenase, ACETATE ION, CADMIUM ION, ...
著者Chekan, J.R, Nair, S.K.
登録日2015-02-17
公開日2015-03-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A Common Late-Stage Intermediate in Catalysis by 2-Hydroxyethyl-phosphonate Dioxygenase and Methylphosphonate Synthase.
J.Am.Chem.Soc., 137, 2015
2HZ8
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QM/MM structure refined from NMR-structure of a single chain diiron protein
分子名称: De novo designed diiron protein, ZINC ION
著者Calhoun, J.R, Liu, W, Spiegel, K, Dal Peraro, M, Klein, M.L, Wand, A.J, DeGrado, W.F.
登録日2006-08-08
公開日2007-07-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution NMR structure of a designed metalloprotein and complementary molecular dynamics refinement.
Structure, 16, 2008
3GCV
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Human P38 MAP Kinase in Complex with RL62
分子名称: 1-{3-[(6-aminoquinazolin-4-yl)amino]phenyl}-3-[3-tert-butyl-1-(3-methylphenyl)-1H-pyrazol-5-yl]urea, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
著者Gruetter, C, Simard, J.R, Getlik, M, Rauh, D.
登録日2009-02-22
公開日2009-06-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Development of a fluorescent-tagged kinase assay system for the detection and characterization of allosteric kinase inhibitors.
J.Am.Chem.Soc., 131, 2009
3GJ3
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BU of 3gj3 by Molmil
Crystal structure of human RanGDP-Nup153ZnF2 complex
分子名称: GTP-binding nuclear protein Ran, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Partridge, J.R, Schwartz, T.U.
登録日2009-03-07
公開日2009-08-04
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Crystallographic and Biochemical Analysis of the Ran-binding Zinc Finger Domain.
J.Mol.Biol., 391, 2009
3I0N
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BU of 3i0n by Molmil
Structure of the S. pombe Nbs1 FHA/BRCT-repeat domain
分子名称: DNA repair and telomere maintenance protein nbs1, GLYCEROL
著者Clapperton, J.A, Lloyd, J, Chapman, J.R, Jackson, S.P, Smerdon, S.J.
登録日2009-06-25
公開日2009-10-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A supramodular FHA/BRCT-repeat architecture mediates Nbs1 adaptor function in response to DNA damage
Cell(Cambridge,Mass.), 139, 2009
3HUC
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Human p38 MAP Kinase in Complex with RL40
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Mitogen-activated protein kinase 14, N-[2-phenyl-4-(1H-pyrazol-3-ylamino)quinazolin-7-yl]prop-2-enamide, ...
著者Gruetter, C, Simard, J.R, Getlik, M, Rauh, D.
登録日2009-06-13
公開日2010-03-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Fluorophore labeling of the glycine-rich loop as a method of identifying inhibitors that bind to active and inactive kinase conformations.
J.Am.Chem.Soc., 132, 2010
3HV7
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Human p38 MAP Kinase in Complex with RL38
分子名称: 1-[1-(3-aminophenyl)-3-tert-butyl-1H-pyrazol-5-yl]-3-naphthalen-1-ylurea, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
著者Gruetter, C, Simard, J.R, Getlik, M, Rauh, D.
登録日2009-06-15
公開日2009-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Displacement assay for the detection of stabilizers of inactive kinase conformations.
J.Med.Chem., 53, 2010

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