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PDB: 680 件

8C72
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Pyrrolidine fragment 10b bound to endothiapepsin
分子名称: (3~{S},4~{S})-4-(4-pyridin-2-yl-1,2,3-triazol-1-yl)piperidin-3-ol, Endothiapepsin, GLYCEROL
著者Wiese, J.N, Buehrmann, M, Mueller, M.P, Rauh, D.
登録日2023-01-12
公開日2023-05-24
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Fragtory: Pharmacophore-Focused Design, Synthesis, and Evaluation of an sp 3 -Enriched Fragment Library.
J.Med.Chem., 66, 2023
8C70
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Pyrrolidine fragment 1 bound to endothiapepsin
分子名称: (3~{R},4~{R})-4-[4-[(5-bromanylpyridin-3-yl)oxymethyl]-1,2,3-triazol-1-yl]pyrrolidin-3-ol, Endothiapepsin
著者Wiese, J.N, Buehrmann, M, Mueller, M.P, Rauh, D.
登録日2023-01-12
公開日2023-05-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Fragtory: Pharmacophore-Focused Design, Synthesis, and Evaluation of an sp 3 -Enriched Fragment Library.
J.Med.Chem., 66, 2023
8C74
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Pyrrolidine fragment 10d bound to endothiapepsin
分子名称: (3~{R},4~{R})-4-[4-[(4-azanylphenoxy)methyl]-1,2,3-triazol-1-yl]pyrrolidin-3-ol, Endothiapepsin, GLYCEROL
著者Wiese, J.N, Buehrmann, M, Mueller, M.P, Rauh, D.
登録日2023-01-12
公開日2023-05-24
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Fragtory: Pharmacophore-Focused Design, Synthesis, and Evaluation of an sp 3 -Enriched Fragment Library.
J.Med.Chem., 66, 2023
8C6S
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Fragment screening hit III bound to endothiapepsin
分子名称: 4-(1,4-diazepan-1-ylsulfonyl)isoquinoline, Endothiapepsin, GLYCEROL
著者Wiese, J.N, Buehrmann, M, Mueller, M.P, Rauh, D.
登録日2023-01-12
公開日2023-05-24
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Fragtory: Pharmacophore-Focused Design, Synthesis, and Evaluation of an sp 3 -Enriched Fragment Library.
J.Med.Chem., 66, 2023
8C6T
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Fragment screening hit IV bound to endothiapepsin
分子名称: 1-[3,5-bis(chloranyl)phenoxy]propan-2-amine, Endothiapepsin, GLYCEROL
著者Wiese, J.N, Buehrmann, M, Mueller, M.P, Rauh, D.
登録日2023-01-12
公開日2023-05-24
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Fragtory: Pharmacophore-Focused Design, Synthesis, and Evaluation of an sp 3 -Enriched Fragment Library.
J.Med.Chem., 66, 2023
8C54
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Cryo-EM structure of NADH bound SLA dehydrogenase RlGabD from Rhizobium leguminosarum bv. trifolii SRD1565
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Succinate semialdehyde dehydrogenase
著者Sharma, M, Meek, R.W, Armstrong, Z, Blaza, J.N, Alhifthi, A, Li, J, Goddard-Borger, E.D, Williams, S.J, Davies, G.J.
登録日2023-01-06
公開日2023-09-20
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (2.52 Å)
主引用文献Molecular basis of sulfolactate synthesis by sulfolactaldehyde dehydrogenase from Rhizobium leguminosarum.
Chem Sci, 14, 2023
1JUL
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BU of 1jul by Molmil
INDOLE-3-GLYCEROLPHOSPHATE SYNTHASE FROM SULFOLOBUS SOLFATARICUS IN A SECOND ORTHORHOMBIC CRYSTAL FORM
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE
著者Knoechel, T.R, Hennig, M, Merz, A, Darimont, B, Kirschner, K, Jansonius, J.N.
登録日1996-05-03
公開日1997-07-07
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of indole-3-glycerol phosphate synthase from the hyperthermophilic archaeon Sulfolobus solfataricus in three different crystal forms: effects of ionic strength.
J.Mol.Biol., 262, 1996
1JUK
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INDOLE-3-GLYCEROLPHOSPHATE SYNTHASE FROM SULFOLOBUS SOLFATARICUS IN A TRIGONAL CRYSTAL FORM
分子名称: INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE, SULFATE ION
著者Knoechel, T.R, Hennig, M, Merz, A, Darimont, B, Kirschner, K, Jansonius, J.N.
登録日1996-05-03
公開日1997-07-07
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of indole-3-glycerol phosphate synthase from the hyperthermophilic archaeon Sulfolobus solfataricus in three different crystal forms: effects of ionic strength.
J.Mol.Biol., 262, 1996
8THS
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BU of 8ths by Molmil
Crystal Structure of a reconstructed Kaede-type Red Fluorescent Protein, LEA A69T
分子名称: DI(HYDROXYETHYL)ETHER, KAEDE-TYPE RED FLUORESCENT PROTEIN, LEA A69T, ...
著者Henderson, J.N, Mills, J.H.
登録日2023-07-17
公開日2023-11-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Capturing excited-state structural snapshots of evolutionary green-to-red photochromic fluorescent proteins.
Front Chem, 11, 2023
1KD0
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BU of 1kd0 by Molmil
Crystal Structure of beta-methylaspartase from Clostridium tetanomorphum. Apo-structure.
分子名称: 1,2-ETHANEDIOL, beta-methylaspartase
著者Asuncion, M, Blankenfeldt, W, Barlow, J.N, Gani, D, Naismith, J.H.
登録日2001-11-12
公開日2001-12-19
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The structure of 3-methylaspartase from Clostridium tetanomorphum functions via the common enolase chemical step.
J.Biol.Chem., 277, 2002
1KCZ
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Crystal Structure of beta-methylaspartase from Clostridium tetanomorphum. Mg-complex.
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, beta-methylaspartase
著者Asuncion, M, Blankenfeldt, W, Barlow, J.N, Gani, D, Naismith, J.H.
登録日2001-11-12
公開日2001-12-19
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The structure of 3-methylaspartase from Clostridium tetanomorphum functions via the common enolase chemical step.
J.Biol.Chem., 277, 2002
8STL
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BU of 8stl by Molmil
Crystal Structure of Nanobody PIK3_Nb16 against wild-type PI3Kalpha
分子名称: Nanobody PIK3_Nb16, SULFATE ION
著者Nwafor, J.N, Srinivasan, L, Chen, Z, Gabelli, S.B, Iheanacho, A, Alzogaray, V, Klinke, S.
登録日2023-05-10
公開日2024-05-22
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Development of isoform specific nanobodies for Class I PI3Ks
To be published
8UB6
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BU of 8ub6 by Molmil
Crystal Structure of a reconstructed Kaede-type Red Fluorescent Protein, LEA H62X, containing 3-methylhistidine at position 62
分子名称: LEAST EVOLVED ANCESTOR (LEA) GFP-LIKE PROTEINS
著者Henderson, J.N, Mills, J.H.
登録日2023-09-22
公開日2023-11-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Capturing excited-state structural snapshots of evolutionary green-to-red photochromic fluorescent proteins.
Front Chem, 11, 2023
8TUA
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BU of 8tua by Molmil
Full-length P-Rex1 in complex with inositol 1,3,4,5-tetrakisphosphate (IP4)
分子名称: INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE, Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein
著者Cash, J.N, Tesmer, J.J.G.
登録日2023-08-15
公開日2024-04-10
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Full-length P-Rex1 in complex with inositol 1,3,4,5-tetrakisphosphate (IP4)
Elife, 2024
8GIL
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BU of 8gil by Molmil
L-threonine 3-Dehydrogenase from Trypanosoma cruzi (apo form)
分子名称: L-threonine 3-dehydrogenase, POTASSIUM ION
著者Faria, J.N, Mercaldi, G.F, Fagundes, M, Bezerra, E.H.S, Cordeiro, A.T.
登録日2023-03-14
公開日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure, allosteric regulation and metabolic activity of L-threonine 3-Dehydrogenase from Trypanosoma cruzi
To Be Published
5O31
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BU of 5o31 by Molmil
Mitochondrial complex I in the deactive state
分子名称: Acyl carrier protein, mitochondrial, FE2/S2 (INORGANIC) CLUSTER, ...
著者Blaza, J.N, Vinothkumar, K.R, Hirst, J.
登録日2017-05-23
公開日2018-01-17
最終更新日2019-10-23
実験手法ELECTRON MICROSCOPY (4.13 Å)
主引用文献Structure of the Deactive State of Mammalian Respiratory Complex I.
Structure, 26, 2018
8GJB
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BU of 8gjb by Molmil
L-threonine 3-Dehydrogenase from Trypanosoma cruzi in complex with NAD and acetate
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, GLYCEROL, ...
著者Mercaldi, G.F, Faria, J.N, Fagundes, M, Bezerra, E.H.S, Cordeiro, A.T.
登録日2023-03-15
公開日2024-03-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure, allosteric regulation and metabolic activity of L-threonine 3-Dehydrogenase from Trypanosoma cruzi
To Be Published
5OXI
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BU of 5oxi by Molmil
C-terminally retracted ubiquitin L67S mutant
分子名称: SULFATE ION, Ubiquitin L67S mutant
著者Gladkova, C.G, Schubert, A.F, Wagstaff, J.L, Pruneda, J.N, Freund, S.M.V, Komander, D.
登録日2017-09-06
公開日2017-11-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献An invisible ubiquitin conformation is required for efficient phosphorylation by PINK1.
EMBO J., 36, 2017
6GZU
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BU of 6gzu by Molmil
Structure of Chlamydia abortus effector protein ChlaDUB
分子名称: Conserved membrane protein, GLYCEROL, ZINC ION
著者Pruneda, J.N, Komander, D.
登録日2018-07-05
公開日2018-11-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献A Chlamydia effector combining deubiquitination and acetylation activities induces Golgi fragmentation.
Nat Microbiol, 3, 2018
4I1N
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BU of 4i1n by Molmil
R104A-ca1697 nanobody binding to the binary DHFR.folate complex
分子名称: Dihydrofolate reductase, FOLIC ACID, Protein ca1697 (nanobody)
著者Oyen, D, Steyaert, J, Barlow, J.N.
登録日2012-11-21
公開日2013-11-27
実験手法X-RAY DIFFRACTION (1.888 Å)
主引用文献Exploring an alternative antibody interaction mechanism
To be Published
4IGL
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BU of 4igl by Molmil
Structure of the RHS-repeat containing BC component of the secreted ABC toxin complex from Yersinia entomophaga
分子名称: GLYCEROL, POTASSIUM ION, YenB, ...
著者Busby, J.N, Panjikar, S, Landsberg, M.J, Hurst, M.R.H, Lott, J.S.
登録日2012-12-17
公開日2013-08-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献The BC component of ABC toxins is an RHS-repeat-containing protein encapsulation device
Nature, 501, 2013
4IQN
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Crystal structure of uncharacterized protein from Salmonella enterica subsp. enterica serovar typhimurium str. 14028s
分子名称: DI(HYDROXYETHYL)ETHER, Putative cytoplasmic protein, TETRAETHYLENE GLYCOL
著者Chang, C, Hatzos-Skintges, C, Adkins, J.N, Brown, R.N, Cort, J.R, Heffron, F, Nakayasu, E.S, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Program for the Characterization of Secreted Effector Proteins (PCSEP)
登録日2013-01-11
公開日2013-01-23
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of uncharacterized protein from salmonella enterica subsp. enterica serovar typhimurium str. 14028s
To be Published
6GZS
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Structure of Chlamydia trachomatis effector protein ChlaDUB1 bound to ubiquitin
分子名称: Deubiquitinase and deneddylase Dub1, GLYCEROL, Polyubiquitin-B, ...
著者Pruneda, J.N, Komander, D.
登録日2018-07-05
公開日2018-11-14
最終更新日2018-12-05
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A Chlamydia effector combining deubiquitination and acetylation activities induces Golgi fragmentation.
Nat Microbiol, 3, 2018
6GZT
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BU of 6gzt by Molmil
Structure of Chlamydia trachomatis effector protein ChlaDUB1 bound to Coenzyme A
分子名称: COENZYME A, Deubiquitinase and deneddylase Dub1, GLYCEROL, ...
著者Pruneda, J.N, Komander, D.
登録日2018-07-05
公開日2018-11-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A Chlamydia effector combining deubiquitination and acetylation activities induces Golgi fragmentation.
Nat Microbiol, 3, 2018
4ID4
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BU of 4id4 by Molmil
Crystal structure of chimeric beta-lactamase cTEM-17m
分子名称: Beta-lactamase TEM, Beta-lactamase PSE-4, CHLORIDE ION, ...
著者Park, J, Gobeil, S, Pelletier, J.N, Berghuis, A.M.
登録日2012-12-11
公開日2013-12-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Maintenance of Native-like Protein Dynamics May Not Be Required for Engineering Functional Proteins.
Chem.Biol., 21, 2014

224931

件を2024-09-11に公開中

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