Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 5587 件

5LEG
DownloadVisualize
BU of 5leg by Molmil
Structure of the bacterial sex F pilus (pED208)
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, Pilin
著者Costa, T.R.D, Ilangovan, I, Ukleja, M, Redzej, A, Santini, J.M, Smith, T.K, Egelman, E.H, Waksman, G.
登録日2016-06-29
公開日2016-09-28
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure of the Bacterial Sex F Pilus Reveals an Assembly of a Stoichiometric Protein-Phospholipid Complex.
Cell, 166, 2016
5LWL
DownloadVisualize
BU of 5lwl by Molmil
MaeR D54A mutant response regulator bound to sulfate
分子名称: SULFATE ION, Transcriptional regulatory protein
著者Miguel-Romero, L, Casino, P, Landete, J.M, Monedero, V, Zuniga, M, Marina, A.
登録日2016-09-18
公開日2017-06-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献The malate sensing two-component system MaeKR is a non-canonical class of sensory complex for C4-dicarboxylates.
Sci Rep, 7, 2017
7SPX
DownloadVisualize
BU of 7spx by Molmil
Crystal structure of photoactive yellow protein (PYP); F28oCNF construct
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Weaver, J.B, Kirsh, J.M, Boxer, S.G.
登録日2021-11-03
公開日2022-05-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献Nitrile Infrared Intensities Characterize Electric Fields and Hydrogen Bonding in Protic, Aprotic, and Protein Environments.
J.Am.Chem.Soc., 144, 2022
7SPV
DownloadVisualize
BU of 7spv by Molmil
Crystal structure of photoactive yellow protein (PYP); F92oCNF construct
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Weaver, J.B, Kirsh, J.M, Boxer, S.G.
登録日2021-11-03
公開日2022-05-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Nitrile Infrared Intensities Characterize Electric Fields and Hydrogen Bonding in Protic, Aprotic, and Protein Environments.
J.Am.Chem.Soc., 144, 2022
7SPW
DownloadVisualize
BU of 7spw by Molmil
Crystal structure of photoactive yellow protein (PYP); F62oCNF construct
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Weaver, J.B, Kirsh, J.M, Boxer, S.G.
登録日2021-11-03
公開日2022-05-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Nitrile Infrared Intensities Characterize Electric Fields and Hydrogen Bonding in Protic, Aprotic, and Protein Environments.
J.Am.Chem.Soc., 144, 2022
5LCB
DownloadVisualize
BU of 5lcb by Molmil
In situ atomic-resolution structure of the baseplate antenna complex in Chlorobaculum tepidum obtained combining solid-state NMR spectroscopy, cryo electron microscopy and polarization spectroscopy
分子名称: BACTERIOCHLOROPHYLL A, Bacteriochlorophyll c-binding protein
著者Nielsen, J.T, Kulminskaya, N.V, Bjerring, M, Linnanto, J.M, Ratsep, M, Pedersen, M, Lambrev, P.H, Dorogi, M, Garab, G, Thomsen, K, Jegerschold, C, Frigaard, N.U, Lindahl, M, Nielsen, N.C.
登録日2016-06-20
公開日2016-07-27
最終更新日2023-09-13
実験手法ELECTRON MICROSCOPY (26.5 Å), SOLID-STATE NMR
主引用文献In situ high-resolution structure of the baseplate antenna complex in Chlorobaculum tepidum.
Nat Commun, 7, 2016
5MCS
DownloadVisualize
BU of 5mcs by Molmil
Solution structure and dynamics of the outer membrane cytochrome OmcF from Geobacter sulfurreducens
分子名称: HEME C, Lipoprotein cytochrome c, 1 heme-binding site
著者Dantas, J.M, Silva, M.A, Morgado, L, Pantoja-Uceda, D, Turner, D.L, Bruix, M, Salgueiro, C.A.
登録日2016-11-10
公開日2017-04-12
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution structure and dynamics of the outer membrane cytochrome OmcF from Geobacter sulfurreducens.
Biochim. Biophys. Acta, 1858, 2017
7T8Y
DownloadVisualize
BU of 7t8y by Molmil
Structure of Class A sortase from Streptococcus pyogenes bound to lipid II mimetic, LPATA: Thr-in conformation
分子名称: ACE-ALA-ZGL-LYS-DAL-DAL, BE2-LEU-PRO-ALA-THR-ALA-ALA, Sortase
著者Piper, I.M, Antos, J.M, Amacher, J.F.
登録日2021-12-17
公開日2022-09-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures of Streptococcus pyogenes class A sortase in complex with substrate and product mimics provide key details of target recognition.
J.Biol.Chem., 298, 2022
7T8Z
DownloadVisualize
BU of 7t8z by Molmil
Structure of Class A sortase from Streptococcus pyogenes bound to lipid II mimetic, LPATA: Thr-out conformation
分子名称: ACE-ALA-ZGL-LYS-DAL-DAL, BE2-LEU-PRO-ALA-THR-ALA-ALA, Sortase
著者Piper, I.M, Antos, J.M, Amacher, J.F.
登録日2021-12-17
公開日2022-09-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures of Streptococcus pyogenes class A sortase in complex with substrate and product mimics provide key details of target recognition.
J.Biol.Chem., 298, 2022
5MI0
DownloadVisualize
BU of 5mi0 by Molmil
A thermally stabilised version of Plasmodium falciparum RH5
分子名称: MONOCLONAL ANTIBODY 9AD4, Reticulocyte binding-like protein 5,Reticulocyte binding protein 5
著者Campeotto, I, Goldenzweig, A, Davey, J, Barfod, L, Marshall, J.M, Silk, S.E, Wright, K.E, Draper, S.J, Higgins, M.K, Fleishman, S.J.
登録日2016-11-27
公開日2016-12-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献One-step design of a stable variant of the malaria invasion protein RH5 for use as a vaccine immunogen.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5MLM
DownloadVisualize
BU of 5mlm by Molmil
Plantago Major multifunctional oxidoreductase V150M mutant in complex with progesterone and NADP+
分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROGESTERONE, Progesterone 5-beta-reductase
著者Fellows, R, Russo, C.M, Lee, S.G, Jez, J.M, Chisholm, J.D, Zubieta, C, Nanao, M.
登録日2016-12-07
公開日2018-08-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.563 Å)
主引用文献A multisubstrate reductase from Plantago major: structure-function in the short chain reductase superfamily.
Sci Rep, 8, 2018
7SZ2
DownloadVisualize
BU of 7sz2 by Molmil
Mouse PARP13/ZAP ZnF5-WWE1-WWE2 bound to ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, PHOSPHATE ION, ...
著者Ayanath Kuttiyatveetil, J.R, Pascal, J.M.
登録日2021-11-25
公開日2022-10-05
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures and functional analysis of the ZnF5-WWE1-WWE2 region of PARP13/ZAP define a distinctive mode of engaging poly(ADP-ribose).
Cell Rep, 41, 2022
7SZ3
DownloadVisualize
BU of 7sz3 by Molmil
Mouse PARP13/ZAP ZnF5-WWE1-WWE2 bound to ADPr
分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, GLYCEROL, PHOSPHATE ION, ...
著者Ayanath Kuttiyatveetil, J.R, Pascal, J.M.
登録日2021-11-25
公開日2022-10-05
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures and functional analysis of the ZnF5-WWE1-WWE2 region of PARP13/ZAP define a distinctive mode of engaging poly(ADP-ribose).
Cell Rep, 41, 2022
5MPA
DownloadVisualize
BU of 5mpa by Molmil
26S proteasome in presence of ATP (s2)
分子名称: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ...
著者Wehmer, M, Rudack, T, Beck, F, Aufderheide, A, Pfeifer, G, Plitzko, J.M, Foerster, F, Schulten, K, Baumeister, W, Sakata, E.
登録日2016-12-16
公開日2017-03-08
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structural insights into the functional cycle of the ATPase module of the 26S proteasome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5MRD
DownloadVisualize
BU of 5mrd by Molmil
Human PDK1-PKCiota Kinase Chimera in Complex with Allosteric Compound PS267 Bound to the PIF-Pocket
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 3-phosphoinositide-dependent protein kinase 1, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Arencibia, J.M, Froehner, W, Krupa, M, Pastor-Flores, D, Merker, P, Oellerich, T, Neimanis, S, Schmithals, C, Koeberle, V, Suess, E, Zeuzem, S, Stark, H, Piiper, A, Odadzic, D, Schulze, J.O, Biondi, R.M.
登録日2016-12-22
公開日2017-01-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献An Allosteric Inhibitor Scaffold Targeting the PIF-Pocket of Atypical Protein Kinase C Isoforms.
ACS Chem. Biol., 12, 2017
5MCP
DownloadVisualize
BU of 5mcp by Molmil
Structure of IMP dehydrogenase from Ashbya gossypii bound to ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Inosine-5'-monophosphate dehydrogenase, MAGNESIUM ION
著者Winter, G, Fernandez-Justel, D, de Pereda, J.M, Revuelta, J.L, Buey, R.M.
登録日2016-11-10
公開日2017-06-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A nucleotide-controlled conformational switch modulates the activity of eukaryotic IMP dehydrogenases.
Sci Rep, 7, 2017
5MPC
DownloadVisualize
BU of 5mpc by Molmil
26S proteasome in presence of BeFx (s4)
分子名称: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ...
著者Wehmer, M, Rudack, T, Beck, F, Aufderheide, A, Pfeifer, G, Plitzko, J.M, Foerster, F, Schulten, K, Baumeister, W, Sakata, E.
登録日2016-12-16
公開日2017-03-08
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (7.7 Å)
主引用文献Structural insights into the functional cycle of the ATPase module of the 26S proteasome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7SX1
DownloadVisualize
BU of 7sx1 by Molmil
human triosephosphate isomerase mutant v154m
分子名称: ISOPROPYL ALCOHOL, Triosephosphate isomerase
著者Romero, J.M.
登録日2021-11-22
公開日2022-11-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献human triosephosphate isomerase mutant v154m
To Be Published
5MVA
DownloadVisualize
BU of 5mva by Molmil
Structure of the thin filament at high calcium concentration
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle
著者Paul, D.M, Squire, J.M, Morris, E.P.
登録日2017-01-16
公開日2017-11-29
実験手法ELECTRON MICROSCOPY (27.700001 Å)
主引用文献Relaxed and active thin filament structures; a new structural basis for the regulatory mechanism.
J. Struct. Biol., 197, 2017
7T0Q
DownloadVisualize
BU of 7t0q by Molmil
human triosephosphate isomerase mutant v154m
分子名称: 2-PHOSPHOGLYCOLIC ACID, GLYCEROL, ISOPROPYL ALCOHOL, ...
著者Romero, J.M.
登録日2021-11-30
公開日2022-12-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献human triosephosphate isomerase mutant v154m
To Be Published
5MOL
DownloadVisualize
BU of 5mol by Molmil
Human IgE-Fc crystal structure
分子名称: 1,2-ETHANEDIOL, 2-(2-ETHOXYETHOXY)ETHANOL, 2-(2-METHOXYETHOXY)ETHANOL, ...
著者Dore, K.A, Davies, A.M, Drinkwater, N, Beavil, A.J, McDonnell, J.M, Sutton, B.J.
登録日2016-12-14
公開日2018-01-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Thermal sensitivity and flexibility of the C epsilon 3 domains in immunoglobulin E.
Biochim. Biophys. Acta, 1865, 2017
5MQ5
DownloadVisualize
BU of 5mq5 by Molmil
A protease-resistant N24S Escherichia coli Asparaginase mutant with outstanding stability and enhanced anti-leukaemic activity
分子名称: ASPARTIC ACID, L-asparaginase 2
著者Maggi, M, Mittelman, S.D, Parmentier, J.H, Whitmire, J.M, Merrell, D.S, Scotti, C.
登録日2016-12-20
公開日2017-11-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A protease-resistant Escherichia coli asparaginase with outstanding stability and enhanced anti-leukaemic activity in vitro.
Sci Rep, 7, 2017
5MR0
DownloadVisualize
BU of 5mr0 by Molmil
Thermophilic archaeal branched-chain amino acid transaminases from Geoglobus acetivorans and Archaeoglobus fulgidus: biochemical and structural characterisation
分子名称: 1,2-ETHANEDIOL, 3-[O-PHOSPHONOPYRIDOXYL]--AMINO-BENZOIC ACID, CHLORIDE ION, ...
著者Isupov, M.N, Littlechild, J.A, James, P, Sayer, C, Sutter, J.M, Schmidt, M, Schoenheit, P.
登録日2016-12-21
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Thermostable Branched-Chain Amino Acid Transaminases From the ArchaeaGeoglobus acetivoransandArchaeoglobus fulgidus: Biochemical and Structural Characterization.
Front Bioeng Biotechnol, 7, 2019
5M7H
DownloadVisualize
BU of 5m7h by Molmil
Crystal structure of Bacillus subtilis EngA in complex with phosphate ion and GMPPNP
分子名称: GTPase Der, PHOSPHATE ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
著者da Silveira Tome, C, Foucher, A.E, Jault, J.M, Housset, D.
登録日2016-10-27
公開日2017-12-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Crystal structure of Bacillus subtilis EngA in complex with phosphate ion and GMPPNP
To Be Published
5MP9
DownloadVisualize
BU of 5mp9 by Molmil
26S proteasome in presence of ATP (s1)
分子名称: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ...
著者Wehmer, M, Rudack, T, Beck, F, Aufderheide, A, Pfeifer, G, Plitzko, J.M, Foerster, F, Schulten, K, Baumeister, W, Sakata, E.
登録日2016-12-16
公開日2017-03-08
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural insights into the functional cycle of the ATPase module of the 26S proteasome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon