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PDB: 5628 results

3JW3
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BU of 3jw3 by Molmil
Crystal structure of Bacillus anthracis (F96I) dihydrofolate reductase complexed with NADPH and Trimethoprim
Descriptor: Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, TRIMETHOPRIM
Authors:Anderson, A.C, Beierlein, J.M, Karri, N.G.
Deposit date:2009-09-17
Release date:2010-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Mutational Studies into Trimethoprim Resistance in Bacillus anthracis Dihydrofolate Reductase
To be Published
3JWM
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BU of 3jwm by Molmil
Crystal structure of Bacillus anthracis dihydrofolate reductase complexed with NADPH and (S)-2,4-diamino-5-(3-methoxy-3-(3,4,5-trimethoxyphenyl)prop-1-ynyl)-6-methylpyrimidine (UCP114A)
Descriptor: 5-[(3S)-3-methoxy-3-(3,4,5-trimethoxyphenyl)prop-1-yn-1-yl]-6-methylpyrimidine-2,4-diamine, Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Anderson, A.C, Beierlein, J.M, Karri, N.G.
Deposit date:2009-09-18
Release date:2010-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Mutational Studies into Trimethoprim Resistance in Bacillus anthracis Dihydrofolate Reductase
To be Published
1SDU
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BU of 1sdu by Molmil
Crystal structures of HIV protease V82A and L90M mutants reveal changes in indinavir binding site.
Descriptor: ACETATE ION, N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, SULFATE ION, ...
Authors:Mahalingam, B, Wang, Y.-F, Boross, P.I, Tozser, J, Louis, J.M, Harrison, R.W, Weber, I.T.
Deposit date:2004-02-14
Release date:2004-05-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structures of HIV protease V82A and L90M mutants reveal changes in the indinavir-binding site
Eur.J.Biochem., 271, 2004
1SDT
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BU of 1sdt by Molmil
Crystal structures of HIV protease V82A and L90M mutants reveal changes in indinavir binding site.
Descriptor: CHLORIDE ION, N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, protease RETROPEPSIN
Authors:Mahalingam, B, Wang, Y.-F, Boross, P.I, Tozser, J, Louis, J.M, Harrison, R.W, Weber, I.T.
Deposit date:2004-02-14
Release date:2004-05-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structures of HIV protease V82A and L90M mutants reveal changes in the indinavir-binding site
Eur.J.Biochem., 271, 2004
3P8H
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BU of 3p8h by Molmil
Crystal structure of L3MBTL1 (MBT repeat) in complex with a nicotinamide antagonist
Descriptor: 3-bromo-5-[(4-pyrrolidin-1-ylpiperidin-1-yl)carbonyl]pyridine, GLYCEROL, Lethal(3)malignant brain tumor-like protein, ...
Authors:Lam, R, Herold, J.M, Ouyang, H, Tempel, W, Gao, C, Ravichandran, M, Senisterra, G, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Vedadi, M, Kireev, D, Frye, S.V, Brown, P.J, Structural Genomics Consortium (SGC)
Deposit date:2010-10-13
Release date:2010-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Small-molecule ligands of methyl-lysine binding proteins.
J.Med.Chem., 54, 2011
1SH3
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BU of 1sh3 by Molmil
Crystal Structure of Norwalk Virus Polymerase (MgSO4 crystal form)
Descriptor: MAGNESIUM ION, RNA Polymerase
Authors:Ng, K.K, Pendas-Franco, N, Rojo, J, Boga, J.A, Machin, A, Alonso, J.M, Parra, F.
Deposit date:2004-02-24
Release date:2004-03-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal structure of norwalk virus polymerase reveals the carboxyl terminus in the active site cleft.
J.Biol.Chem., 279, 2004
3C97
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BU of 3c97 by Molmil
Crystal structure of the response regulator receiver domain of a signal transduction histidine kinase from Aspergillus oryzae
Descriptor: Signal transduction histidine kinase
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Chang, S, Romero, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-02-15
Release date:2008-03-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the response regulator receiver domain of a signal transduction histidine kinase from Aspergillus oryzae.
To be Published
3OX4
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BU of 3ox4 by Molmil
Structures of iron-dependent alcohol dehydrogenase 2 from Zymomonas mobilis ZM4 complexed with NAD cofactor
Descriptor: Alcohol dehydrogenase 2, FE (II) ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Moon, J.H, Lee, H.J, Song, J.M, Park, S.Y, Park, M.Y, Park, H.M, Sun, J, Park, J.H, Kim, J.S.
Deposit date:2010-09-21
Release date:2011-02-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of iron-dependent alcohol dehydrogenase 2 from Zymomonas mobilis ZM4 with and without NAD+ cofactor
J.Mol.Biol., 407, 2011
3H9M
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BU of 3h9m by Molmil
Crystal structure of para-aminobenzoate synthetase, component I from Cytophaga hutchinsonii
Descriptor: (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, TRIETHYLENE GLYCOL, p-aminobenzoate synthetase, ...
Authors:Sampathkumar, P, Atwell, S, Wasserman, S, Do, J, Bain, K, Rutter, M, Gheyi, T, Sauder, J.M, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-04-30
Release date:2009-06-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Crystal structure of para-aminobenzoate synthetase, component I from Cytophaga hutchinsonii
To be Published
1SFK
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BU of 1sfk by Molmil
Core (C) protein from West Nile Virus, subtype Kunjin
Descriptor: CALCIUM ION, CHLORIDE ION, Core protein, ...
Authors:Dokland, T, Walsh, M, Mackenzie, J.M, Khromykh, A.A, Ee, K.-H, Wang, S.
Deposit date:2004-02-19
Release date:2004-08-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:West nile virus core protein; tetramer structure and ribbon formation
Structure, 12, 2004
3KAL
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BU of 3kal by Molmil
Structure of homoglutathione synthetase from Glycine max in closed conformation with homoglutathione, ADP, a sulfate ion, and three magnesium ions bound
Descriptor: ADENOSINE-5'-DIPHOSPHATE, D-gamma-glutamyl-L-cysteinyl-beta-alanine, MAGNESIUM ION, ...
Authors:Galant, A, Arkus, K.A.J, Zubieta, C, Cahoon, R.E, Jez, J.M.
Deposit date:2009-10-19
Release date:2009-12-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for Evolution of Product Diversity in Soybean Glutathione Biosynthesis.
Plant Cell, 21, 2009
3BQT
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BU of 3bqt by Molmil
Crystal structure of a protein of unknown function from Listeria monocytogenes, tetragonal form
Descriptor: Uncharacterized protein
Authors:Madegowda, M, Sauder, J.M, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-12-20
Release date:2008-01-08
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of a protein of unknown function from Listeria monocytogenes.
To be Published
3J3I
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BU of 3j3i by Molmil
Penicillium chrysogenum virus (PcV) capsid structure
Descriptor: Capsid protein
Authors:Luque, D, Gomez-Blanco, J, Garriga, D, Brilot, A, Gonzalez, J.M, Havens, W.H, Carrascosa, J.L, Trus, B.L, Verdaguer, N, Grigorieff, N, Ghabrial, S.A, Caston, J.R.
Deposit date:2013-03-08
Release date:2014-05-14
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM near-atomic structure of a dsRNA fungal virus shows ancient structural motifs preserved in the dsRNA viral lineage.
Proc.Natl.Acad.Sci.USA, 111, 2014
3HCW
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BU of 3hcw by Molmil
CRYSTAL STRUCTURE OF PROBABLE maltose operon transcriptional repressor malR FROM STAPHYLOCOCCUS AREUS
Descriptor: GLYCEROL, Maltose operon transcriptional repressor
Authors:Patskovsky, Y, Toro, R, Morano, C, Freeman, J, Chang, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-05-06
Release date:2009-05-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Maltose Operon Transcriptional Repressor from Staphylococcus Aureus
To be Published
1O24
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BU of 1o24 by Molmil
Crystal structure of Thymidylate Synthase Complementing Protein (TM0449) from Thermotoga maritima at 2.0 A resolution
Descriptor: Thymidylate synthase thyX
Authors:Mathews, I.I, Deacon, A.M, Canaves, J.M, McMullan, D, Lesley, S.A, Agarwalla, S, Kuhn, P, Joint Center for Structural Genomics (JCSG)
Deposit date:2003-02-18
Release date:2003-06-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Functional Analysis of Substrate and Cofactor Complex Structures of a Thymidylate Synthase-Complementing Protein
Structure, 11, 2003
3J9F
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BU of 3j9f by Molmil
Poliovirus complexed with soluble, deglycosylated poliovirus receptor (Pvr) at 4 degrees C
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PALMITIC ACID, ...
Authors:Strauss, M, Filman, D.J, Belnap, D.M, Cheng, N, Noel, R.T, Hogle, J.M.
Deposit date:2015-01-15
Release date:2015-02-11
Last modified:2022-12-21
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Nectin-Like Interactions between Poliovirus and Its Receptor Trigger Conformational Changes Associated with Cell Entry.
J.Virol., 89, 2015
3I4S
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BU of 3i4s by Molmil
CRYSTAL STRUCTURE OF HISTIDINE TRIAD PROTEIN blr8122 FROM Bradyrhizobium japonicum
Descriptor: GLYCEROL, HISTIDINE TRIAD PROTEIN
Authors:Patskovsky, Y, Ramagopal, U, Toro, R, Freeman, J, Do, J, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-02
Release date:2009-07-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:CRYSTAL STRUCTURE OF HISTIDINE TRIAD PROTEIN FROM Bradyrhizobium japonicum
To be Published
3CZB
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BU of 3czb by Molmil
Crystal structure of putative transglycosylase from Caulobacter crescentus
Descriptor: Putative transglycosylase, SULFATE ION
Authors:Ramagopal, U.A, Chattopadhyay, K, Toro, R, Wasserman, S, Freeman, J, Logan, C, Bain, K, Gheyi, T, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-04-28
Release date:2008-06-10
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of putative transglycosylase from Caulobacter crescentus.
To be Published
4A8O
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BU of 4a8o by Molmil
Non-Catalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial dsRNA virus phi6 from De Novo Initiation to Elongation
Descriptor: MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE
Authors:Wright, S, Poranen, M.M, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2011-11-21
Release date:2012-07-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Noncatalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial Double-Stranded RNA Virus Phi6 from De Novo Initiation to Elongation.
J.Virol., 86, 2012
3HY7
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BU of 3hy7 by Molmil
Crystal Structure of the Catalytic Domain of ADAMTS-5 in Complex with Marimastat
Descriptor: (2S,3R)-N~4~-[(1S)-2,2-dimethyl-1-(methylcarbamoyl)propyl]-N~1~,2-dihydroxy-3-(2-methylpropyl)butanediamide, A disintegrin and metalloproteinase with thrombospondin motifs 5, CALCIUM ION, ...
Authors:Shieh, H.-S, Williams, J.M, Caspers, N, Mathis, K.J, Tortorella, M.D, Tomasselli, A.
Deposit date:2009-06-22
Release date:2009-07-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structural and inhibition analysis reveals the mechanism of selectivity of a series of aggrecanase inhibitors
J.Biol.Chem., 284, 2009
3D2Z
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BU of 3d2z by Molmil
Complex of the N-acetylmuramyl-L-alanine amidase AmiD from E.coli with the product L-Ala-D-gamma-Glu-L-Lys
Descriptor: CHLORIDE ION, L-Ala-D-gamma-Glu-L-Lys peptide, N-acetylmuramoyl-L-alanine amidase amiD, ...
Authors:Kerff, F, Petrella, S, Herman, R, Sauvage, E, Mercier, F, Luxen, A, Frere, J.M, Joris, B, Charlier, P.
Deposit date:2008-05-09
Release date:2009-06-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Specific Structural Features of the N-Acetylmuramoyl-l-Alanine Amidase AmiD from Escherichia coli and Mechanistic Implications for Enzymes of This Family.
J.Mol.Biol., 397, 2010
3Q6P
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BU of 3q6p by Molmil
Salivary protein from Lutzomyia longipalpis. Selenomethionine derivative
Descriptor: 43.2 kDa salivary protein, CITRIC ACID
Authors:Andersen, J.F, Xu, X, Chang, B.W, Collin, N, Valenzuela, J.G, Ribeiro, J.M.
Deposit date:2011-01-03
Release date:2011-07-27
Last modified:2019-10-23
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure and function of a "yellow" protein from saliva of the sand fly Lutzomyia longipalpis that confers protective immunity against Leishmania major infection.
J.Biol.Chem., 286, 2011
1SH0
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BU of 1sh0 by Molmil
Crystal Structure of Norwalk Virus Polymerase (Triclinic)
Descriptor: RNA Polymerase
Authors:Ng, K.K, Pendas-Franco, N, Rojo, J, Boga, J.A, Machin, A, Alonso, J.M, Parra, F.
Deposit date:2004-02-24
Release date:2004-03-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Crystal structure of norwalk virus polymerase reveals the carboxyl terminus in the active site cleft.
J.Biol.Chem., 279, 2004
3I14
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BU of 3i14 by Molmil
Cobalt-substituted metallo-beta-lactamase from Bacillus cereus: residue Cys168 partially oxidized
Descriptor: Beta-lactamase 2, COBALT (II) ION, GLYCEROL
Authors:Gonzalez, J.M, Buschiazzo, A, Vila, A.J.
Deposit date:2009-06-25
Release date:2009-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Evidence of adaptability in metal coordination geometry and active-site loop conformation among B1 metallo-beta-lactamases .
Biochemistry, 49, 2010
3JVX
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BU of 3jvx by Molmil
Crystal structure of Bacillus anthracis dihydrofolate reductase complexed with NADPH and 2,4-diamino-5-(3-(3,4,5-trimethoxyphenyl)prop-1-ynyl)-6-ethylpyrimidine (UCP120A)
Descriptor: 6-ethyl-5-[3-(3,4,5-trimethoxyphenyl)prop-1-yn-1-yl]pyrimidine-2,4-diamine, Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Anderson, A.C, Beierlein, J.M, Karri, N.G.
Deposit date:2009-09-17
Release date:2010-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Mutational Studies into Trimethoprim Resistance in Bacillus anthracis Dihydrofolate Reductase
To be Published

224201

數據於2024-08-28公開中

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