Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 5677 件

7KUD
DownloadVisualize
BU of 7kud by Molmil
Ax2 Domain of VEGF Readthrough Element
分子名称: VEGF Ax2
著者D'Souza, V.M, Wagner, N.O, Edwards, J.M.
登録日2020-11-24
公開日2022-06-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Stop codon readthrough in VEGF-A is regulated by complex signals
To Be Published
2PL7
DownloadVisualize
BU of 2pl7 by Molmil
Orhorhombic crystal structure of hydrophobin HFBII in the presence of a detergent
分子名称: Hydrophobin-2, SULFATE ION, heptyl 1-thio-beta-D-glucopyranoside
著者Kallio, J.M, Rouvinen, J.P.
登録日2007-04-19
公開日2007-07-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Crystal Structures of Hydrophobin HFBII in the Presence of Detergent Implicate the Formation of Fibrils and Monolayer Films.
J.Biol.Chem., 282, 2007
3KN4
DownloadVisualize
BU of 3kn4 by Molmil
AGAO 6-phenyl-2,3-hexadienylamine complex
分子名称: COPPER (II) ION, GLYCEROL, Phenylethylamine oxidase, ...
著者Nguyen, Y.H, Ernberg, K.E, Guss, J.M.
登録日2009-11-12
公開日2010-10-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献AGAO 6-phenyl-2,3-hexadienylamine complex
To be Published
2PFQ
DownloadVisualize
BU of 2pfq by Molmil
Manganese promotes catalysis in a DNA polymerase lambda-DNA crystal
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA polymerase lambda, Downstream Primer, ...
著者Garcia-Diaz, M, Bebenek, K, Krahn, J.M, Pedersen, L.C, Kunkel, T.A.
登録日2007-04-05
公開日2007-05-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Role of the catalytic metal during polymerization by DNA polymerase lambda.
DNA Repair, 6, 2007
1FYY
DownloadVisualize
BU of 1fyy by Molmil
HPRT GENE MUTATION HOTSPOT WITH A BPDE2(10R) ADDUCT
分子名称: 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE, 5'-D(*TP*GP*CP*CP*CP*TP*TP*GP*AP*CP*TP*A)-3', HPRT DNA WITH BENZO[A]PYRENE-ADDUCTED DA7
著者Volk, D.E, Rice, J.S, Luxon, B.A, Yeh, H.J.C, Liang, C, Xie, G, Sayer, J.M, Jerina, D.M, Gorenstein, D.G.
登録日2000-10-03
公開日2000-12-06
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR evidence for syn-anti interconversion of a trans opened (10R)-dA adduct of benzo[a]pyrene (7S,8R)-diol (9R,10S)-epoxide in a DNA duplex.
Biochemistry, 39, 2000
2VQP
DownloadVisualize
BU of 2vqp by Molmil
Structure of the matrix protein from human Respiratory Syncytial Virus
分子名称: ACETATE ION, FORMIC ACID, GLYCEROL, ...
著者Money, V.A, McPhee, H.K, Sanderson, J.M, Yeo, R.P.
登録日2008-03-18
公開日2009-02-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Surface Features of a Mononegavirales Matrix Protein Indicate Sites of Membrane Interaction.
Proc.Natl.Acad.Sci.USA, 106, 2009
1Z5C
DownloadVisualize
BU of 1z5c by Molmil
Topoisomerase VI-B, ADP Pi bound dimer form
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Corbett, K.D, Berger, J.M.
登録日2005-03-17
公開日2005-06-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural dissection of ATP turnover in the prototypical GHL ATPase TopoVI.
Structure, 13, 2005
1Z71
DownloadVisualize
BU of 1z71 by Molmil
thrombin and P2 pyridine N-oxide inhibitor complex structure
分子名称: Hirudin IIIB', L17, thrombin
著者Nantermet, P.G, Burgey, C.S, Robinson, K.A, Pellicore, J.M, Newton, C.L, Deng, J.Z, Lyle, T.A, Selnick, H.G, Lewis, S.D, Lucas, B.J, Krueger, J.A, Miller-Stein, C, White, R.B, Wong, B, McMasters, D.R, Wallace, A.A, Lynch Jr, J.J, Yan, Y, Chen, Z, Kuo, L, Gardell, S.J, Shafer, J.A, Vacca, J.P.
登録日2005-03-23
公開日2005-05-17
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献P(2) pyridine N-oxide thrombin inhibitors: a novel peptidomimetic scaffold
BIOORG.MED.CHEM.LETT., 15, 2005
1Z79
DownloadVisualize
BU of 1z79 by Molmil
Crystal structure of an RNA duplex containing site specific 2'-amine substitution at a C-A mismatch (at pH 5)
分子名称: CALCIUM ION, RNA 5'-R(*GP*CP*AP*GP*AP*(A5M)P*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3'
著者Gherghe, C.M, Krahn, J.M, Weeks, K.M.
登録日2005-03-24
公開日2005-10-18
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structures, reactivity and inferred acylation transition States for 2'-amine substituted RNA.
J.Am.Chem.Soc., 127, 2005
3KUC
DownloadVisualize
BU of 3kuc by Molmil
Complex of Rap1A(E30D/K31E)GDP with RafRBD(A85K/N71R)
分子名称: CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Filchtinski, D, Sharabi, O, Rueppel, A, Vetter, I.R, Herrmann, C, Shifman, J.M.
登録日2009-11-27
公開日2010-03-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献What makes Ras an efficient molecular switch: a computational, biophysical, and structural study of Ras-GDP interactions with mutants of Raf.
J.Mol.Biol., 399, 2010
1G83
DownloadVisualize
BU of 1g83 by Molmil
CRYSTAL STRUCTURE OF FYN SH3-SH2
分子名称: PROTO-ONCOGENE TYROSINE-PROTEIN KINASE FYN
著者Arold, S.T, Ulmer, T.S, Mulhern, T.D, Werner, J.M, Ladbury, J.E, Campbell, I.D, Noble, M.E.M.
登録日2000-11-16
公開日2001-05-30
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The role of the Src homology 3-Src homology 2 interface in the regulation of Src kinases.
J.Biol.Chem., 276, 2001
2PMB
DownloadVisualize
BU of 2pmb by Molmil
Crystal structure of predicted nucleotide-binding protein from Vibrio cholerae
分子名称: GLYCEROL, PHOSPHATE ION, Uncharacterized protein
著者Patskovsky, Y, Zhan, C, Shi, W, Toro, R, Sauder, J.M, Gilmore, J, Iizuka, M, Maletic, M, Gheyi, T, Wasserman, S.R, Smith, D, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-04-20
公開日2007-05-08
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Crystal Structure of Predicted Nucleotide-Binding Protein from Vibrio Cholerae.
To be Published
2X7P
DownloadVisualize
BU of 2x7p by Molmil
The Conserved Candida albicans CA3427 Gene Product Defines a New Family of Proteins Exhibiting the Generic Periplasmic Binding Protein Structural Fold
分子名称: 2-(2-ETHOXYETHOXY)ETHANOL, ACETIC ACID, CALCIUM ION, ...
著者Santini, S, Monchois, V, Mouz, N, Rousselle, T, Claverie, J.M, Abergel, C.
登録日2010-03-03
公開日2011-03-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献The Conserved Candida Albicans Ca3427 Gene Product Defines a New Family of Proteins Exhibiting the Generic Periplasmic Binding Protein Structural Fold
Plos One, 6, 2011
2WLN
DownloadVisualize
BU of 2wln by Molmil
POTASSIUM CHANNEL FROM MAGNETOSPIRILLUM MAGNETOTACTICUM
分子名称: POTASSIUM CHANNEL, POTASSIUM ION
著者Clarke, O.B, Caputo, A.T, Smith, B.J, Gulbis, J.M.
登録日2009-06-24
公開日2010-06-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.44 Å)
主引用文献Domain Reorientation and Rotation of an Intracellular Assembly Regulate Conduction in Kir Potassium Channels.
Cell(Cambridge,Mass.), 141, 2010
3KPC
DownloadVisualize
BU of 3kpc by Molmil
Crystal Structure of the CBS domain pair of protein MJ0100 in complex with 5 -methylthioadenosine and S-adenosyl-L-methionine
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, S-ADENOSYLMETHIONINE, Uncharacterized protein MJ0100
著者Lucas, M, Oyenarte, I, Garcia, I.G, Arribas, E.A, Encinar, J.A, Kortazar, D, Fernandez, J.A, Mato, J.M, Martinez-Chantar, M.L, Martinez-Cruz, L.A.
登録日2009-11-16
公開日2010-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Binding of S-Methyl-5'-Thioadenosine and S-Adenosyl-l-Methionine to Protein MJ0100 Triggers an Open-to-Closed Conformational Change in Its CBS Motif Pair.
J.Mol.Biol., 396, 2010
2WMA
DownloadVisualize
BU of 2wma by Molmil
Structural and thermodynamic consequences of cyclization of peptide ligands for the recruitment site of cyclin A
分子名称: CELL DIVISION PROTEIN KINASE 2, CYCLIC RKLFN-NH2, CYCLIN-A2
著者Robertson, G.F, Endicott, J.A, Noble, M.E.M, McDonnell, J.M.
登録日2009-06-30
公開日2010-09-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural and Thermodynamic Consequences of Cyclization of Peptide Ligands for the Recruitment Site of Cyclin A
To be Published
2WLI
DownloadVisualize
BU of 2wli by Molmil
POTASSIUM CHANNEL FROM MAGNETOSPIRILLUM MAGNETOTACTICUM
分子名称: KIRBAC3.1 POTASSIUM CHANNEL, POTASSIUM CHANNEL, POTASSIUM ION
著者Clarke, O.B, Caputo, A.T, Smith, B.J, Gulbis, J.M.
登録日2009-06-24
公開日2010-06-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Domain Reorientation and Rotation of an Intracellular Assembly Regulate Conduction in Kir Potassium Channels.
Cell(Cambridge,Mass.), 141, 2010
2PS2
DownloadVisualize
BU of 2ps2 by Molmil
Crystal structure of putative mandelate racemase/muconate lactonizing enzyme from Aspergillus oryzae
分子名称: MAGNESIUM ION, Putative mandelate racemase/muconate lactonizing enzyme
著者Fedorov, A.A, Toro, R, Fedorov, E.V, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-05-04
公開日2007-05-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of putative mandelate racemase/muconate lactonizing enzyme from Aspergillus oryzae.
To be Published
2PW9
DownloadVisualize
BU of 2pw9 by Molmil
Crystal structure of a putative formate dehydrogenase accessory protein from Desulfotalea psychrophila
分子名称: Putative formate dehydrogenase accessory protein, SULFATE ION
著者Bonanno, J.B, Dickey, M, Bain, K.T, Logan, C, Romero, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-05-10
公開日2007-05-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of a putative formate dehydrogenase accessory protein from Desulfotalea psychrophila.
To be Published
2A8H
DownloadVisualize
BU of 2a8h by Molmil
Crystal structure of catalytic domain of TACE with Thiomorpholine Sulfonamide Hydroxamate inhibitor
分子名称: 4-({4-[(4-AMINOBUT-2-YNYL)OXY]PHENYL}SULFONYL)-N-HYDROXY-2,2-DIMETHYLTHIOMORPHOLINE-3-CARBOXAMIDE, ADAM 17, ZINC ION
著者Levin, J.I, Chen, J.M, Laakso, L.M, Du, M, Schmid, J, Xu, W, Cummons, T, Xu, J, Jin, G, Barone, D, Skotnicki, J.S.
登録日2005-07-08
公開日2006-02-07
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Acetylenic TACE inhibitors. Part 3: Thiomorpholine sulfonamide hydroxamates.
Bioorg.Med.Chem.Lett., 16, 2006
2WLH
DownloadVisualize
BU of 2wlh by Molmil
POTASSIUM CHANNEL FROM MAGNETOSPIRILLUM MAGNETOTACTICUM
分子名称: CHLORIDE ION, POTASSIUM CHANNEL, POTASSIUM ION
著者Clarke, O.B, Caputo, A.T, Smith, B.J, Gulbis, J.M.
登録日2009-06-24
公開日2010-06-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.28 Å)
主引用文献Domain Reorientation and Rotation of an Intracellular Assembly Regulate Conduction in Kir Potassium Channels.
Cell(Cambridge,Mass.), 141, 2010
2Q17
DownloadVisualize
BU of 2q17 by Molmil
Formylglycine Generating Enzyme from Streptomyces coelicolor
分子名称: CALCIUM ION, formylglycine generating enzyme
著者Carlson, B.L, Ballister, E.R, Skordalakes, E, King, D.S, Breidenbach, M.A, Gilmore, S.A, Berger, J.M, Bertozzi, C.R.
登録日2007-05-23
公開日2008-04-01
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Function and structure of a prokaryotic formylglycine-generating enzyme.
J.Biol.Chem., 283, 2008
3KNS
DownloadVisualize
BU of 3kns by Molmil
Bacillus cereus metallo-beta-lactamase Cys221Asp mutant, 20 mM Zn(II)
分子名称: ACETIC ACID, Beta-lactamase 2, GLYCEROL, ...
著者Medrano Martin, F.J, Gonzalez, J.M, Vila, A.J.
登録日2009-11-12
公開日2010-11-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Metallo-beta-lactamases withstand low Zn(II) conditions by tuning metal-ligand interactions.
Nat.Chem.Biol., 8, 2012
2PY5
DownloadVisualize
BU of 2py5 by Molmil
Phi29 DNA polymerase complexed with single-stranded DNA
分子名称: 1,2-ETHANEDIOL, 5'-d(GGACTTT)-3', DNA polymerase
著者Berman, A.J, Kamtekar, S, Goodman, J.L, Lazaro, J.M, de Vega, M, Blanco, L, Salas, M, Steitz, T.A.
登録日2007-05-15
公開日2007-07-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structures of phi29 DNA polymerase complexed with substrate: the mechanism of translocation in B-family polymerases
Embo J., 26, 2007
2A8V
DownloadVisualize
BU of 2a8v by Molmil
RHO TRANSCRIPTION TERMINATION FACTOR/RNA COMPLEX
分子名称: 5'-R(P*CP*CP*C)-3', 5'-R(P*CP*CP*CP*CP*CP*C)-3', RNA BINDING DOMAIN OF RHO TRANSCRIPTION TERMINATION FACTOR
著者Bogden, C.E, Fass, D, Bergman, N, Nichols, M.D, Berger, J.M.
登録日1998-11-08
公開日1999-04-26
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The structural basis for terminator recognition by the Rho transcription termination factor.
Mol.Cell, 3, 1999

227111

件を2024-11-06に公開中

PDB statisticsPDBj update infoContact PDBjnumon