Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 5659 results

1W6C
DownloadVisualize
BU of 1w6c by Molmil
AGAO holoenzyme in a small cell, at 2.2 angstroms
Descriptor: COPPER (II) ION, PHENYLETHYLAMINE OXIDASE, SODIUM ION
Authors:Duff, A.P, Langley, D.B, Juda, G.A, Shepard, E.M, Dooley, D.M, Freeman, H.C, Guss, J.M.
Deposit date:2004-08-17
Release date:2005-12-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Copper Containing Amine Oxidase from Arthrobacter Globiformis: Refinement at 1.55 And 2.20 A Resolution in Two Crystal Forms.
Acta Crystallogr.,Sect.F, 62, 2006
4DD8
DownloadVisualize
BU of 4dd8 by Molmil
ADAM-8 metalloproteinase domain with bound batimastat
Descriptor: 4-(N-HYDROXYAMINO)-2R-ISOBUTYL-2S-(2-THIENYLTHIOMETHYL)SUCCINYL-L-PHENYLALANINE-N-METHYLAMIDE, CALCIUM ION, CHLORIDE ION, ...
Authors:Hall, T, Shieh, H.S, Day, J.E, Caspers, N, Chrencik, J.E, Williams, J.M, Pegg, L.E, Pauley, A.M, Moon, A.F, Krahn, J.M, Fischer, D.H, Kiefer, J.R, Tomasselli, A.G, Zack, M.D.
Deposit date:2012-01-18
Release date:2012-06-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of human ADAM-8 catalytic domain complexed with batimastat.
Acta Crystallogr.,Sect.F, 68, 2012
1W7C
DownloadVisualize
BU of 1w7c by Molmil
PPLO at 1.23 Angstroms
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
Authors:Duff, A.P, Cohen, A.E, Ellis, P.J, Guss, J.M.
Deposit date:2004-09-01
Release date:2006-08-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:The 1.23 A Structure of Pichia Pastoris Lysyl Oxidase Reveals a Lysine-Lysine Cross-Link
Acta Crystallogr.,Sect.D, 62, 2006
1W1N
DownloadVisualize
BU of 1w1n by Molmil
The solution structure of the FATC Domain of the Protein Kinase TOR1 from yeast
Descriptor: PHOSPHATIDYLINOSITOL 3-KINASE TOR1
Authors:Dames, S.A, Mulet, J.M, Rathgeb-Szabo, K, Hall, M.N, Grzesiek, S.
Deposit date:2004-06-23
Release date:2005-03-16
Last modified:2018-05-02
Method:SOLUTION NMR
Cite:The solution structure of the FATC domain of the protein kinase target of rapamycin suggests a role for redox-dependent structural and cellular stability.
J. Biol. Chem., 280, 2005
1W2Z
DownloadVisualize
BU of 1w2z by Molmil
PSAO and Xenon
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, AMINE OXIDASE, COPPER CONTAINING, ...
Authors:Duff, A.P, Trambaiolo, D.M, Cohen, A.E, Ellis, P.J, Juda, G.A, Shepard, E.M, Langley, D.B, Dooley, D.M, Freeman, H.C, Guss, J.M.
Deposit date:2004-07-11
Release date:2004-11-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Using Xenon as a Probe for Dioxygen-Binding Sites in Copper Amine Oxidases.
J.Mol.Biol., 344, 2004
4F2J
DownloadVisualize
BU of 4f2j by Molmil
Crystal structure of ZNF217 bound to DNA, P6522 crystal form
Descriptor: 5'-D(*TP*TP*TP*GP*CP*AP*GP*AP*AP*TP*CP*GP*AP*TP*TP*CP*TP*GP*CP*A)-3', ZINC ION, Zinc finger protein 217
Authors:Vandevenne, M.S, Jacques, D.A, Guss, J.M, Mackay, J.P.
Deposit date:2012-05-08
Release date:2013-02-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:New insights into DNA recognition by zinc fingers revealed by structural analysis of the oncoprotein ZNF217
J.Biol.Chem., 288, 2013
1VPO
DownloadVisualize
BU of 1vpo by Molmil
Crystal Structure Analysis of the Anti-testosterone Fab in Complex with Testosterone
Descriptor: TESTOSTERONE, anti-testosterone (heavy chain), anti-testosterone (light chain)
Authors:Valjakka, J.M, Hemminki, A, Niemi, S, Soderlund, H, Takkinen, K, Rouvinen, J.
Deposit date:2004-11-15
Release date:2004-11-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structure of an in Vitro Affinity- and Specificity-matured Anti-testosterone Fab in Complex with Testosterone. IMPROVED AFFINITY RESULTS FROM SMALL STRUCTURAL CHANGES WITHIN THE VARIABLE DOMAINS
J.Biol.Chem., 277, 2002
1F6C
DownloadVisualize
BU of 1f6c by Molmil
CRYSTAL STRUCTURE OF THE B-DNA HEXAMER GGCGCC WITH SPERMINE
Descriptor: DNA (5'-D(*GP*GP*CP*GP*CP*C)-3'), SPERMINE
Authors:Vargason, J.M, Eichman, B.F, Ho, P.S.
Deposit date:2000-06-21
Release date:2000-08-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The extended and eccentric E-DNA structure induced by cytosine methylation or bromination.
Nat.Struct.Biol., 7, 2000
1F6E
DownloadVisualize
BU of 1f6e by Molmil
CRYSTAL STRUCTURE OF THE A-DNA HEXAMER GGCGM5CC
Descriptor: DNA (5'-D(*GP*GP*CP*GP*(5CM)P*C)-3')
Authors:Vargason, J.M, Eichman, B.F, Ho, P.S.
Deposit date:2000-06-21
Release date:2000-08-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:The extended and eccentric E-DNA structure induced by cytosine methylation or bromination.
Nat.Struct.Biol., 7, 2000
1F6I
DownloadVisualize
BU of 1f6i by Molmil
CRYSTAL STRUCTURE OF THE E-DNA HEXAMER GGCGM5CC
Descriptor: DNA (5'-D(*GP*GP*CP*GP*(5CM)P*C)-3')
Authors:Vargason, J.M, Eichman, B.F, Ho, P.S.
Deposit date:2000-06-21
Release date:2000-08-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The extended and eccentric E-DNA structure induced by cytosine methylation or bromination.
Nat.Struct.Biol., 7, 2000
1F6J
DownloadVisualize
BU of 1f6j by Molmil
CRYSTAL STRUCTURE OF THE E-DNA HEXAMER GGCGBR5CC
Descriptor: DNA (5'-D(*GP*GP*CP*GP*(CBR)P*C)-3')
Authors:Vargason, J.M, Eichman, B.F, Ho, P.S.
Deposit date:2000-06-21
Release date:2000-08-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The extended and eccentric E-DNA structure induced by cytosine methylation or bromination.
Nat.Struct.Biol., 7, 2000
1W3F
DownloadVisualize
BU of 1w3f by Molmil
Crystal structure of the hemolytic lectin from the mushroom Laetiporus sulphureus complexed with N-acetyllactosamine in the gamma motif
Descriptor: GLYCEROL, HEMOLYTIC LECTIN FROM LAETIPORUS SULPHUREUS, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose
Authors:Mancheno, J.M, Tateno, H, Goldstein, I.J, Martinez-Ripoll, M, Hermoso, J.A.
Deposit date:2004-07-15
Release date:2005-02-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Structural Analysis of the Laetiporus Sulphureus Hemolytic Pore-Forming Lectin in Complex with Sugars
J.Biol.Chem., 280, 2005
1F5W
DownloadVisualize
BU of 1f5w by Molmil
DIMERIC STRUCTURE OF THE COXSACKIE VIRUS AND ADENOVIRUS RECEPTOR D1 DOMAIN
Descriptor: COXSACKIE VIRUS AND ADENOVIRUS RECEPTOR, SULFATE ION
Authors:van Raaij, M.J, Chouin, E, van der Zandt, H, Bergelson, J.M, Cusack, S.
Deposit date:2000-06-18
Release date:2000-11-08
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Dimeric structure of the coxsackievirus and adenovirus receptor D1 domain at 1.7 A resolution.
Structure Fold.Des., 8, 2000
1VZ8
DownloadVisualize
BU of 1vz8 by Molmil
Ornithine Acetyltransferase (ORF6 Gene Product - Clavulanic Acid Biosynthesis) from Streptomyces clavuligerus (SeMet structure)
Descriptor: ORNITHINE ACETYL-TRANSFERASE, SULFATE ION
Authors:Elkins, J.M, Kershaw, N.J, Schofield, C.J.
Deposit date:2004-05-14
Release date:2004-09-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:X-Ray Crystal Structure of Ornithine Acetyltransferase from the Clavulanic Acid Biosynthesis Gene Cluster.
Biochem.J., 385, 2005
1F69
DownloadVisualize
BU of 1f69 by Molmil
CRYSTAL STRUCTURE OF THE B-DNA HEXAMER GGCGCC WITH COBALT HEXAMINE
Descriptor: COBALT HEXAMMINE(III), DNA (5'-D(*GP*GP*CP*GP*CP*C)-3'), MAGNESIUM ION
Authors:Vargason, J.M, Eichman, B.F, Ho, P.S.
Deposit date:2000-06-20
Release date:2000-08-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The extended and eccentric E-DNA structure induced by cytosine methylation or bromination.
Nat.Struct.Biol., 7, 2000
1C01
DownloadVisualize
BU of 1c01 by Molmil
SOLUTION STRUCTURE OF MIAMP1, A PLANT ANTIMICROBIAL PROTEIN
Descriptor: ANTIMICROBIAL PEPTIDE 1
Authors:McManus, A.M, Nielsen, K.J, Marcus, J.P, Harrison, S.J, Green, J.L, Manners, J.M, Craik, D.J.
Deposit date:1999-07-13
Release date:2000-07-19
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:MiAMP1, a novel protein from Macadamia integrifolia adopts a Greek key beta-barrel fold unique amongst plant antimicrobial proteins.
J.Mol.Biol., 293, 1999
1C4B
DownloadVisualize
BU of 1c4b by Molmil
A BETA-HAIRPIN MIMIC FROM FCERI-ALPHA-CYCLO(RD-262)
Descriptor: PROTEIN (CYCLO(RD-262))
Authors:Mcdonnell, J.M, Fushman, D, Cahill, S.M, Sutton, B.J, Cowburn, D.
Deposit date:1999-08-02
Release date:1999-08-25
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structures of FceRI Alpha-Chain Mimics: A Beta-Hairpin Peptide and Its Retroenantiomer
J.Am.Chem.Soc., 119, 1997
1XZ4
DownloadVisualize
BU of 1xz4 by Molmil
Intersubunit Interactions Associated with Tyr42alpha Stabilize the Quaternary-T Tetramer but are not Major Quaternary Constraints in Deoxyhemoglobin: alphaY42A deoxyhemoglobin no-salt
Descriptor: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kavanaugh, J.S, Rogers, P.H, Arnone, A, Hui, H.L, Wierzba, A, DeYoung, A, Kwiatkowski, L.D, Noble, R.W, Juszczak, L.J, Peterson, E.S, Friedman, J.M.
Deposit date:2004-11-11
Release date:2004-11-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Intersubunit interactions associated with tyr42alpha stabilize the quaternary-T tetramer but are not major quaternary constraints in deoxyhemoglobin
Biochemistry, 44, 2005
1C4Z
DownloadVisualize
BU of 1c4z by Molmil
STRUCTURE OF AN E6AP-UBCH7 COMPLEX: INSIGHTS INTO THE UBIQUITINATION PATHWAY
Descriptor: UBIQUITIN CONJUGATING ENZYME E2, UBIQUITIN-PROTEIN LIGASE E3A
Authors:Huang, L, Kinnucan, E, Wang, G, Beaudenon, S, Howley, P.M, Huibregtse, J.M, Pavletich, N.P.
Deposit date:1999-10-14
Release date:1999-11-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of an E6AP-UbcH7 complex: insights into ubiquitination by the E2-E3 enzyme cascade.
Science, 286, 1999
1ECU
DownloadVisualize
BU of 1ecu by Molmil
SOLUTION STRUCTURE OF E2F BINDING DNA FRAGMENT GCGCGAAAC-T-GTTTCGCGC
Descriptor: DNA (5'-D(*GP*CP*GP*CP*GP*AP*AP*AP*CP*TP*GP*TP*TP*TP*CP*GP*CP*GP*C)-3')
Authors:Wu, J.H, Chang, C, Pei, J.M, Xiao, Q, Shi, Y.Y.
Deposit date:2000-01-26
Release date:2000-02-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of E2F binding DNA fragment GCGCGAAAC-T-GTTTCGCGC studied by Molecular Dynamics Simulation and Two Dimensional NMR experiment
to be published, 2000
1EGJ
DownloadVisualize
BU of 1egj by Molmil
DOMAIN 4 OF THE BETA COMMON CHAIN IN COMPLEX WITH AN ANTIBODY
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY (HEAVY CHAIN), ANTIBODY (LIGHT CHAIN), ...
Authors:Rossjohn, J, McKinstry, W.J, Woodcock, J.M, McClure, B.J, Hercus, T.R, Parker, M.W, Lopez, A.F, Bagley, C.J.
Deposit date:2000-02-15
Release date:2001-02-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the activation domain of the GM-CSF/IL-3/IL-5 receptor common beta-chain bound to an antagonist.
Blood, 95, 2000
1EM8
DownloadVisualize
BU of 1em8 by Molmil
Crystal structure of chi and psi subunit heterodimer from DNA POL III
Descriptor: DNA POLYMERASE III CHI SUBUNIT, DNA POLYMERASE III PSI SUBUNIT
Authors:Gulbis, J.M, Finkelstein, J, O'Donnell, M, Kuriyan, J.
Deposit date:2000-03-16
Release date:2003-08-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the chi:psi sub-assembly of the Escherichia coli DNA polymerase clamp-loader complex.
Eur.J.Biochem., 271, 2004
1XUI
DownloadVisualize
BU of 1xui by Molmil
TRYPSIN-KETO-BABIM, ZN+2-FREE, PH 8.2
Descriptor: BIS(5-AMIDINO-2-BENZIMIDAZOLYL)METHANONE, CALCIUM ION, SODIUM ION, ...
Authors:Katz, B.A, Clark, J.M, Finer-Moore, J.S, Jenkins, T.E, Johnson, C.R, Rose, M.J, Luong, C, Moore, W.R, Stroud, R.M.
Deposit date:1997-10-10
Release date:1998-11-11
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Design of potent selective zinc-mediated serine protease inhibitors.
Nature, 391, 1998
1XUG
DownloadVisualize
BU of 1xug by Molmil
TRYPSIN-BABIM-ZN+2, PH 8.2
Descriptor: BIS(5-AMIDINO-BENZIMIDAZOLYL)METHANE, CALCIUM ION, TRYPSIN, ...
Authors:Katz, B.A, Clark, J.M, Finer-Moore, J.S, Jenkins, T.E, Johnson, C.R, Rose, M.J, Luong, C, Moore, W.R, Stroud, R.M.
Deposit date:1997-10-10
Release date:1998-12-16
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Design of potent selective zinc-mediated serine protease inhibitors.
Nature, 391, 1998
1XUK
DownloadVisualize
BU of 1xuk by Molmil
TRYPSIN-BABIM-SULFATE, PH 5.9
Descriptor: BIS(5-AMIDINO-BENZIMIDAZOLYL)METHANE, CALCIUM ION, SULFATE ION, ...
Authors:Katz, B.A, Clark, J.M, Finer-Moore, J.S, Jenkins, T.E, Johnson, C.R, Rose, M.J, Luong, C, Moore, W.R, Stroud, R.M.
Deposit date:1997-10-10
Release date:1998-11-11
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Design of potent selective zinc-mediated serine protease inhibitors.
Nature, 391, 1998

225681

PDB entries from 2024-10-02

PDB statisticsPDBj update infoContact PDBjnumon