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PDB: 2437 results

4BIP
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BU of 4bip by Molmil
Homology model of coxsackievirus A7 (CAV7) full capsid proteins.
Descriptor: VP1, VP2, VP3
Authors:Seitsonen, J.J.T, Shakeel, S, Susi, P, Pandurangan, A.P, Sinkovits, R.S, Hyvonen, H, Laurinmaki, P, Yla-Pelto, J, Topf, M, Hyypia, T, Butcher, S.J.
Deposit date:2013-04-12
Release date:2013-10-02
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (8.23 Å)
Cite:Combined Approaches to Flexible Fitting and Assessment in Virus Capsids Undergoing Conformational Change.
J.Struct.Biol., 185, 2014
3UO9
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BU of 3uo9 by Molmil
Crystal Structure of Human GAC in Complex with Glutamate and BPTES
Descriptor: GLYCEROL, Glutaminase kidney isoform, mitochondrial, ...
Authors:DeLaBarre, B, Gross, S, Cheng, F, Gao, Y, Jha, A, Jiang, F, Song, J.J, Wei, W, Hurov, J.B.
Deposit date:2011-11-16
Release date:2011-12-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Full-length human glutaminase in complex with an allosteric inhibitor.
Biochemistry, 50, 2011
2V3V
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BU of 2v3v by Molmil
A New Catalytic Mechanism of Periplasmic Nitrate Reductase from Desulfovibrio desulfuricans ATCC 27774 from Crystallographic and EPR Data and based on detailed analysis of the sixth ligand
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, IRON/SULFUR CLUSTER, MOLYBDENUM ATOM, ...
Authors:Najmudin, S, Gonzalez, P.J, Trincao, J, Coelho, C, Mukhopadhyay, A, Romao, C.C, Moura, I, Moura, J.J, Brondino, C.D, Romao, M.J.
Deposit date:2007-06-22
Release date:2008-03-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Periplasmic Nitrate Reductase Revisited: A Sulfur Atom Completes the Sixth Coordination of the Catalytic Molybdenum.
J.Biol.Inorg.Chem., 13, 2008
4QJ4
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BU of 4qj4 by Molmil
Structure of a fragment of human phospholipase C-beta3 delta472-569, bound to IP3 and in complex with Galphaq
Descriptor: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3, CALCIUM ION, D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, ...
Authors:Lyon, A.M, Tesmer, J.J.G.
Deposit date:2014-06-03
Release date:2014-10-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Molecular mechanisms of phospholipase C beta 3 autoinhibition.
Structure, 22, 2014
6D8Z
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BU of 6d8z by Molmil
Crystal Structure of the C-terminal Guanine Nucleotide Exchange Factor Module of Human Trio
Descriptor: Triple functional domain protein
Authors:Bandekar, S, Tesmer, J.J.
Deposit date:2018-04-27
Release date:2019-02-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure of the C-terminal guanine nucleotide exchange factor module of Trio in an autoinhibited conformation reveals its oncogenic potential.
Sci Signal, 12, 2019
8XUV
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BU of 8xuv by Molmil
Cryo-EM structure of tomato NRC2 filament
Descriptor: ADENOSINE-5'-DIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, NRC2
Authors:Sun, Y, Ma, S.C, Chai, J.J.
Deposit date:2024-01-14
Release date:2024-05-22
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Oligomerization-mediated autoinhibition and cofactor binding of a plant NLR.
Nature, 632, 2024
8XUO
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BU of 8xuo by Molmil
Cryo-EM structure of tomato NRC2 dimer
Descriptor: ADENOSINE-5'-DIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, NRC2
Authors:Sun, Y, Ma, S.C, Chai, J.J.
Deposit date:2024-01-13
Release date:2024-05-22
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Oligomerization-mediated autoinhibition and cofactor binding of a plant NLR.
Nature, 632, 2024
8XUQ
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BU of 8xuq by Molmil
Cryo-EM structure of tomato NRC2 tetramer
Descriptor: ADENOSINE-5'-DIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, NRC2
Authors:Sun, Y, Ma, S.C, Chai, J.J.
Deposit date:2024-01-14
Release date:2024-05-22
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.17 Å)
Cite:Oligomerization-mediated autoinhibition and cofactor binding of a plant NLR.
Nature, 632, 2024
4PNI
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BU of 4pni by Molmil
Bovine G protein-coupled receptor kinase 1 in complex with GSK2163632A
Descriptor: 3-[(2-{[1-(N,N-dimethylglycyl)-6-methoxy-4,4-dimethyl-1,2,3,4-tetrahydroquinolin-7-yl]amino}-7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]thiophene-2-carboxamide, CHLORIDE ION, Rhodopsin kinase
Authors:Homan, K.T, Tesmer, J.J.G.
Deposit date:2014-05-23
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Identification and structure-function analysis of subfamily selective g protein-coupled receptor kinase inhibitors.
Acs Chem.Biol., 10, 2015
4BEZ
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BU of 4bez by Molmil
Night blindness causing G90D rhodopsin in the active conformation
Descriptor: ACETATE ION, PALMITIC ACID, RHODOPSIN, ...
Authors:Singhal, A, Ostermaier, M.K, Vishnivetskiy, S.A, Panneels, V, Homan, K.T, Tesmer, J.J.G, Veprintsev, D, Deupi, X, Gurevich, V.V, Schertler, G.F.X, Standfuss, J.
Deposit date:2013-03-12
Release date:2013-04-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Insights Into Congenital Stationary Night Blindness Based on the Structure of G90D Rhodopsin.
Embo Rep., 14, 2013
4BIQ
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BU of 4biq by Molmil
Homology model of coxsackievirus A7 (CAV7) empty capsid proteins.
Descriptor: VP1, VP2, VP3
Authors:Seitsonen, J.J.T, Shakeel, S, Susi, P, Pandurangan, A.P, Sinkovits, R.S, Hyvonen, H, Laurinmaki, P, Yla-Pelto, J, Topf, M, Hyypia, T, Butcher, S.J.
Deposit date:2013-04-12
Release date:2013-10-02
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (6.09 Å)
Cite:Combined Approaches to Flexible Fitting and Assessment in Virus Capsids Undergoing Conformational Change.
J.Struct.Biol., 185, 2014
6Y0O
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BU of 6y0o by Molmil
isopenicillin N synthase in complex with ACV and Fe under anaerobic environment using FT-SSX methods
Descriptor: Anaerobic Fixed Target Structure of Isopenicillin N synthase in complex with Fe and ACV, FE (III) ION, L-D-(A-AMINOADIPOYL)-L-CYSTEINYL-D-VALINE, ...
Authors:Rabe, P, Beale, J.H, Lang, P.A, Dirr, A.S, Leissing, T.M, Butryn, A, Aller, P, Kamps, J.J.A.G, Axford, D, McDonough, M.A, Orville, A.M, Owen, R, Schofield, C.J.
Deposit date:2020-02-10
Release date:2020-09-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Anaerobic fixed-target serial crystallography.
Iucrj, 7, 2020
5URI
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BU of 5uri by Molmil
Rat CYPOR/D632A with 2'-AMP
Descriptor: ADENOSINE-2'-MONOPHOSPHATE, FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Xia, C, Kim, J.J.
Deposit date:2017-02-10
Release date:2018-02-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and Kinetic Studies of Asp632 Mutants and Fully Reduced NADPH-Cytochrome P450 Oxidoreductase Define the Role of Asp632 Loop Dynamics in the Control of NADPH Binding and Hydride Transfer.
Biochemistry, 57, 2018
8FAM
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BU of 8fam by Molmil
Edited Octopus bimaculoides Synaptotagmin 1 C2A (I248V) at room temperature
Descriptor: Synaptotagmin
Authors:McNeme, S, Dominguez, M.J, Birk, M.A, Rosenthal, J.J, Sutton, R.B.
Deposit date:2022-11-28
Release date:2023-07-19
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Temperature-dependent RNA editing in octopus extensively recodes the neural proteome.
Cell, 186, 2023
5URE
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BU of 5ure by Molmil
Wild type rat CYPOR bound with NADP+ - reduced form
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Xia, C, Kim, J.J.
Deposit date:2017-02-10
Release date:2018-02-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and Kinetic Studies of Asp632 Mutants and Fully Reduced NADPH-Cytochrome P450 Oxidoreductase Define the Role of Asp632 Loop Dynamics in the Control of NADPH Binding and Hydride Transfer.
Biochemistry, 57, 2018
8WJQ
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BU of 8wjq by Molmil
Cryo-EM structure of URAT1(R477S)-Urate complex
Descriptor: Solute carrier family 22 member 12, URIC ACID
Authors:Qian, H.W, He, J.J.
Deposit date:2023-09-26
Release date:2024-08-28
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis for the transport and substrate selection of human urate transporter 1.
Cell Rep, 43, 2024
8WJH
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BU of 8wjh by Molmil
Cryo-EM structure of OAT4
Descriptor: CHLORIDE ION, Solute carrier family 22 member 11
Authors:Qian, H.W, He, J.J.
Deposit date:2023-09-26
Release date:2024-08-28
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis for the transport and substrate selection of human urate transporter 1.
Cell Rep, 43, 2024
8WJG
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BU of 8wjg by Molmil
Cryo-EM structure of URAT1(R477S)
Descriptor: Solute carrier family 22 member 12
Authors:Qian, H.W, He, J.J.
Deposit date:2023-09-25
Release date:2024-08-28
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis for the transport and substrate selection of human urate transporter 1.
Cell Rep, 43, 2024
4QJ3
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BU of 4qj3 by Molmil
Structure of a fragment of human phospholipase C-beta3 delta472-559, in complex with Galphaq
Descriptor: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Lyon, A.M, Tesmer, J.J.G.
Deposit date:2014-06-03
Release date:2014-10-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Molecular mechanisms of phospholipase C beta 3 autoinhibition.
Structure, 22, 2014
2V45
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BU of 2v45 by Molmil
A New Catalytic Mechanism of Periplasmic Nitrate Reductase from Desulfovibrio desulfuricans ATCC 27774 from Crystallographic and EPR Data and based on detailed analysis of the sixth ligand
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, IRON/SULFUR CLUSTER, MOLYBDENUM ATOM, ...
Authors:Najmudin, S, Gonzalez, P.J, Trincao, J, Coelho, C, Mukhopadhyay, A, Romao, C.C, Moura, I, Moura, J.J, Brondino, C.D, Romao, M.J.
Deposit date:2007-06-27
Release date:2008-03-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Periplasmic Nitrate Reductase Revisited: A Sulfur Atom Completes the Sixth Coordination of the Catalytic Molybdenum.
J.Biol.Inorg.Chem., 13, 2008
5VT4
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BU of 5vt4 by Molmil
Sco GlgEI-V279S in complex with a pyrolidene-based methyl-phosphonate compound
Descriptor: Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 1, {[(2R,3R,4R,5R)-3-(alpha-D-glucopyranosyloxy)-4-hydroxy-2,5-bis(hydroxymethyl)pyrrolidin-1-yl]methyl}phosphonic acid
Authors:Petit, C, Ronning, D.R, Lindenberger, J.J.
Deposit date:2017-05-15
Release date:2017-06-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.205 Å)
Cite:Zwitterionic pyrrolidene-phosphonates: inhibitors of the glycoside hydrolase-like phosphorylase Streptomyces coelicolor GlgEI-V279S.
Org. Biomol. Chem., 15, 2017
4PNK
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BU of 4pnk by Molmil
G protein-coupled receptor kinase 2 in complex with GSK180736A
Descriptor: (4S)-4-(4-fluorophenyl)-N-(2H-indazol-5-yl)-6-methyl-2-oxo-1,2,3,4-tetrahydropyrimidine-5-carboxamide, Beta-adrenergic receptor kinase 1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Homan, K.T, Larimore, K.M, Elkins, J, Knapp, S, Tesmer, J.J.G.
Deposit date:2014-05-23
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Identification and structure-function analysis of subfamily selective g protein-coupled receptor kinase inhibitors.
Acs Chem.Biol., 10, 2015
4QJ5
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BU of 4qj5 by Molmil
Structure of a fragment of human phospholipase C-beta3 delta472-581, bound to IP3 and in complex with Galphaq
Descriptor: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3, CALCIUM ION, D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, ...
Authors:Lyon, A.M, Tesmer, J.J.G.
Deposit date:2014-06-03
Release date:2014-10-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.41 Å)
Cite:Molecular mechanisms of phospholipase C beta 3 autoinhibition.
Structure, 22, 2014
4M6B
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BU of 4m6b by Molmil
Crystal structure of yeast Swr1-Z domain in complex with H2A.Z-H2B dimer
Descriptor: Chimera protein of Histone H2B.1 and Histone H2A.Z, Helicase SWR1
Authors:Hong, J.J, Feng, H.Q, Wang, F, Ranjan, A, Chen, J.H, Jiang, J.S, Girlando, R, Xiao, T.S, Wu, C, Bai, Y.W.
Deposit date:2013-08-09
Release date:2014-02-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:The Catalytic Subunit of the SWR1 Remodeler Is a Histone Chaperone for the H2A.Z-H2B Dimer.
Mol.Cell, 53, 2014
2KKD
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BU of 2kkd by Molmil
NMR Structure of Ni Substitued Desulfovibrio vulgaris Rubredoxin
Descriptor: NICKEL (II) ION, Rubredoxin
Authors:Nunes, S.G, Volkman, B.F, Moura, J.J.G, Moura, I, Macedo, A.L, Markley, J.L, Duarte, I.C.
Deposit date:2009-06-18
Release date:2009-12-22
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:An NMR structural study of nickel-substituted rubredoxin
J.Biol.Inorg.Chem., 15, 2010

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