4M6B

Crystal structure of yeast Swr1-Z domain in complex with H2A.Z-H2B dimer

Summary for 4M6B

DescriptorChimera protein of Histone H2B.1 and Histone H2A.Z, Helicase SWR1 (3 entities in total)
Functional Keywordschromatin remodeler, histone binding, structural protein-hydrolase complex, structural protein/hydrolase
Biological sourceSaccharomyces cerevisiae (Baker's yeast)
Cellular locationNucleus  Q12692 Q05471
Total number of polymer chains4
Total molecular weight54351.13
Authors
Hong, J.J.,Feng, H.Q.,Wang, F.,Ranjan, A.,Chen, J.H.,Jiang, J.S.,Girlando, R.,Xiao, T.S.,Wu, C.,Bai, Y.W. (deposition date: 2013-08-09, release date: 2014-02-19, Last modification date: 2017-11-15)
Primary citation
Hong, J.,Feng, H.,Wang, F.,Ranjan, A.,Chen, J.,Jiang, J.,Ghirlando, R.,Xiao, T.S.,Wu, C.,Bai, Y.
The Catalytic Subunit of the SWR1 Remodeler Is a Histone Chaperone for the H2A.Z-H2B Dimer.
Mol.Cell, 53:498-505, 2014
PubMed: 24507717 (PDB entries with the same primary citation)
DOI: 10.1016/j.molcel.2014.01.010
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.78 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.22040.2%2.3%11.7%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 4m6b
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Molmil generated image of 4m6b
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Molmil generated image of 4m6b
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 4m6b
no rotation
Molmil generated image of 4m6b
rotated about x axis by 90°
Molmil generated image of 4m6b
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (4m6b.pdb1.gz [34.23 KB])
Coordinate files for Biological unit (4m6b.pdb2.gz [36.67 KB])
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