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PDB: 2129 results

2MZD
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BU of 2mzd by Molmil
Characterization of the p300 Taz2-p53 TAD2 Complex and Comparison with the p300 Taz2-p53 TAD1 Complex
Descriptor: Cellular tumor antigen p53, Histone acetyltransferase p300
Authors:Miller Jenkins, L.M, Feng, H, Durell, S.R, Tagad, H.D, Mazur, S.J, Tropea, J.E, Bai, Y, Appella, E.
Deposit date:2015-02-11
Release date:2015-03-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Characterization of the p300 Taz2-p53 TAD2 Complex and Comparison with the p300 Taz2-p53 TAD1 Complex.
Biochemistry, 54, 2015
4B4A
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BU of 4b4a by Molmil
Structure of the TatC core of the twin arginine protein translocation system
Descriptor: Lauryl Maltose Neopentyl Glycol, SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC
Authors:Rollauer, S.E, Tarry, M.J, Jaaskelainen, M, Graham, J.E, Jaeger, F, Krehenbrink, M, Roversi, P, McDowell, M.A, Stansfeld, P.J, Johnson, S, Liu, S.M, Lukey, M.J, Marcoux, J, Robinson, C.V, Sansom, M.S, Palmer, T, Hogbom, M, Berks, B.C, Lea, S.M.
Deposit date:2012-07-30
Release date:2012-12-05
Last modified:2012-12-19
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of the Tatc Core of the Twin-Arginine Protein Transport System.
Nature, 49, 2012
8G4J
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BU of 8g4j by Molmil
Crystal structure of Cavia porcellus (guinea pig) importin-alpha 1 in cargo-free state
Descriptor: Importin subunit alpha
Authors:Hawker, J.E, Roby, J.A, Stewart, M, Forwood, J.K.
Deposit date:2023-02-09
Release date:2023-02-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of Cavia porcellus (guinea pig) importin-alpha 1 in cargo-free state
To Be Published
2N7M
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BU of 2n7m by Molmil
NMR-SAXS/WAXS Structure of the core of the U4/U6 di-snRNA
Descriptor: RNA (92-MER)
Authors:Cornilescu, G, Didychuk, A.L, Rodgers, M.L, Michael, L.A, Burke, J.E, Montemayor, E.J, Hoskins, A.A, Butcher, S.E, Tonelli, M.
Deposit date:2015-09-14
Release date:2015-12-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Analysis of Multi-Helical RNAs by NMR-SAXS/WAXS: Application to the U4/U6 di-snRNA.
J.Mol.Biol., 428, 2016
1NC1
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BU of 1nc1 by Molmil
Crystal structure of E. coli MTA/AdoHcy nucleosidase complexed with 5'-methylthiotubercidin (MTH)
Descriptor: 2-(4-AMINO-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-METHYLSULFANYLMETHYL-TETRAHYDRO-FURAN-3,4-DIOL, MTA/SAH nucleosidase
Authors:Lee, J.E, Cornell, K.A, Riscoe, M.K, Howell, P.L.
Deposit date:2002-12-04
Release date:2003-11-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of Escherichia coli 5'-methylthioadenosine/ S-adenosylhomocysteine nucleosidase inhibitor complexes provide insight into the conformational changes required for substrate binding and catalysis.
J.Biol.Chem., 278, 2003
7TT9
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BU of 7tt9 by Molmil
Crystal structure of Shewanella benthica Group 1 truncated hemoglobin C51S C71S Y34F variant
Descriptor: Group 1 truncated hemoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Martinez, J.E, Liu, K, Siegler, M.A, Schlessman, J.L, Lecomte, J.T.J.
Deposit date:2022-02-01
Release date:2022-02-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Shewanella benthica Group 1 truncated hemoglobin C51S C71S Y34F variant
To Be Published
2Y4M
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BU of 2y4m by Molmil
MANNOSYLGLYCERATE SYNTHASE IN COMPLEX WITH GDP-Mannose
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GUANOSINE 5'-(TRIHYDROGEN DIPHOSPHATE), ...
Authors:Nielsen, M.M, Suits, M.D.L, Yang, M, Barry, C.S, Martinez-Fleites, C, Tailford, L.E, Flint, J.E, Davis, B.G, Davies, G.J, Gilbert, H.J.
Deposit date:2011-01-07
Release date:2011-02-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Substrate and Metal Ion Promiscuity in Mannosylglycerate Synthase.
J.Biol.Chem., 286, 2011
5NZQ
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BU of 5nzq by Molmil
Crystal structure of human 3-phosphoglycerate dehydrogenase in complex with 3-(1,3-oxazol-5-yl)aniline.
Descriptor: 3-(1,3-oxazol-5-yl)aniline, D-3-phosphoglycerate dehydrogenase
Authors:Unterlass, J.E, Basle, A, Blackburn, T.J, Tucker, J, Cano, C, Noble, M.E.M, Curtin, N.J.
Deposit date:2017-05-14
Release date:2017-06-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Validating and enabling phosphoglycerate dehydrogenase (PHGDH) as a target for fragment-based drug discovery in PHGDH-amplified breast cancer.
Oncotarget, 9, 2018
2Y4K
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BU of 2y4k by Molmil
MANNOSYLGLYCERATE SYNTHASE IN COMPLEX WITH MG-GDP
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, FORMIC ACID, ...
Authors:Nielsen, M.M, Suits, M.D.L, Yang, M, Barry, C.S, Martinez-Fleites, C, Tailford, L.E, Flint, J.E, Davis, B.G, Davies, G.J, Gilbert, H.J.
Deposit date:2011-01-07
Release date:2011-02-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Substrate and Metal Ion Promiscuity in Mannosylglycerate Synthase.
J.Biol.Chem., 286, 2011
2Y4U
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BU of 2y4u by Molmil
Crystal structure of human P58(IPK) in space group P312
Descriptor: DNAJ HOMOLOG SUBFAMILY C MEMBER 3
Authors:Svard, M, Biterova, E.I, Bourhis, J.-M, Guy, J.E.
Deposit date:2011-01-10
Release date:2011-08-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The Crystal Structure of the Human Co-Chaperone P58Ipk
Plos One, 6, 2011
2XJJ
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BU of 2xjj by Molmil
Structure of HSP90 with small molecule inhibitor bound
Descriptor: 1,3-DIHYDROISOINDOL-2-YL-(6-HYDROXY-3,3-DIMETHYL-1,2-DIHYDROINDOL-5-YL)METHANONE, GLYCEROL, HEAT SHOCK PROTEIN HSP 90-ALPHA
Authors:Murray, C.W, Carr, M.G, Callaghan, O, Chessari, G, Congreve, M, Cowan, S, Coyle, J.E, Downham, R, Figueroa, E, Frederickson, M, Graham, B, McMenamin, R, OBrien, M.A, Patel, S, Phillips, T.R, Williams, G, Woodhead, A.J, Woolford, A.J.A.
Deposit date:2010-07-06
Release date:2010-08-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery of (2,4-Dihydroxy-5-Isopropylphenyl)-[5-(4-Methylpiperazin-1-Ylmethyl)-1,3-Dihydroisoindol-2-Yl]Methanone (at13387), a Novel Inhibitor of the Molecular Chaperone Hsp90 by Fragment Based Drug Design.
J.Med.Chem., 53, 2010
2XGR
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BU of 2xgr by Molmil
extracellular endonuclease
Descriptor: DI(HYDROXYETHYL)ETHER, SPD1 NUCLEASE
Authors:Korczynska, J.E, Turkenburg, J.P, Taylor, E.J.
Deposit date:2010-06-07
Release date:2011-07-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Structural Characterization of a Prophage-Encoded Extracellular DNase from Streptococcus Pyogenes.
Nucleic Acids Res., 40, 2012
2XHT
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BU of 2xht by Molmil
Structure of HSP90 with small molecule inhibitor bound
Descriptor: (3-TERT-BUTYL-4-HYDROXYPHENYL)MORPHOLIN-4-YL-METHANONE, HEAT SHOCK PROTEIN HSP 90-ALPHA
Authors:Murray, C.W, Carr, M.G, Callaghan, O, Chessari, G, Congreve, M, Cowan, S, Coyle, J.E, Downham, R, Figueroa, E, Frederickson, M, Graham, B, McMenamin, R, OBrien, M.A, Patel, S, Phillips, T.R, Williams, G, Woodhead, A.J, Woolford, A.J.A.
Deposit date:2010-06-21
Release date:2010-09-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Fragment-Based Drug Discovery Applied to Hsp90. Discovery of Two Lead Series with High Ligand Efficiency.
J.Med.Chem., 53, 2010
4CY6
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BU of 4cy6 by Molmil
apo structure of 2-hydroxybiphenyl 3-monooxygenase HbpA
Descriptor: 2-HYDROXYBIPHENYL-3-MONOOXYGENASE
Authors:Jensen, C.N, Farrugia, J.E, Frank, A, Man, H, Hart, S, Turkenburg, J.P, Grogan, G.
Deposit date:2014-04-10
Release date:2015-03-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Structures of the Apo and Fad-Bound Forms of 2-Hydroxybiphenyl 3-Monooxygenase (Hbpa) Locate Activity Hotspots Identified by Using Directed Evolution.
Chembiochem, 16, 2015
2XK2
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BU of 2xk2 by Molmil
Structure of HSP90 with small molecule inhibitor bound
Descriptor: ADENOSINE-5'-DIPHOSPHATE, HEAT SHOCK PROTEIN HSP 90-ALPHA, MAGNESIUM ION
Authors:Murray, C.W, Carr, M.G, Callaghan, O, Chessari, G, Congreve, M, Cowan, S, Coyle, J.E, Downham, R, Figueroa, E, Frederickson, M, Graham, B, McMenamin, R, OBrien, M.A, Patel, S, Phillips, T.R, Williams, G, Woodhead, A.J, Woolford, A.J.A.
Deposit date:2010-07-07
Release date:2010-09-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Fragment-Based Drug Discovery Applied to Hsp90. Discovery of Two Lead Series with High Ligand Efficiency.
J.Med.Chem., 53, 2010
5OGX
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BU of 5ogx by Molmil
Crystal structure of Amycolatopsis cytochrome P450 reductase GcoB.
Descriptor: BROMIDE ION, Cytochrome P450 reductase, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Mallinson, S.J.B, Johnson, C.W, Neidle, E.L, Beckham, G.T, McGeehan, J.E.
Deposit date:2017-07-13
Release date:2018-07-04
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:A promiscuous cytochrome P450 aromatic O-demethylase for lignin bioconversion.
Nat Commun, 9, 2018
2XDX
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BU of 2xdx by Molmil
Structure of HSP90 with small molecule inhibitor bound
Descriptor: 4-CHLORO-6-(2-METHOXYPHENYL)PYRIMIDIN-2-AMINE, HEAT SHOCK PROTEIN HSP 90-ALPHA
Authors:Murray, C.W, Carr, M.G, Callaghan, O, Chessari, G, Congreve, M, Cowan, S, Coyle, J.E, Downham, R, Figueroa, E, Frederickson, M, Graham, B, McMenamin, R, O'Brien, M.A, Patel, S, Phillips, T.R, Williams, G, Woodhead, A.J, Woolford, A.J.A.
Deposit date:2010-05-10
Release date:2010-09-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Fragment-Based Drug Discovery Applied to Hsp90. Discovery of Two Lead Series with High Ligand Efficiency.
J.Med.Chem., 53, 2010
2XJX
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BU of 2xjx by Molmil
Structure of HSP90 with small molecule inhibitor bound
Descriptor: HEAT SHOCK PROTEIN HSP 90-ALPHA, Onalespib
Authors:Murray, C.W, Carr, M.G, Callaghan, O, Chessari, G, Congreve, M, Cowan, S, Coyle, J.E, Downham, R, Figueroa, E, Frederickson, M, Graham, B, McMenamin, R, OBrien, M.A, Patel, S, Phillips, T.R, Williams, G, Woodhead, A.J, Woolford, A.J.A.
Deposit date:2010-07-06
Release date:2010-08-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Discovery of (2,4-Dihydroxy-5-Isopropylphenyl)-[5-(4-Methylpiperazin-1-Ylmethyl)-1,3-Dihydroisoindol-2-Yl]Methanone (at13387), a Novel Inhibitor of the Molecular Chaperone Hsp90 by Fragment Based Drug Design.
J.Med.Chem., 53, 2010
5NZP
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BU of 5nzp by Molmil
Crystal structure of human 3-phosphoglycerate dehydrogenase in complex with 3-Hydroxybenzisoxazole
Descriptor: 1,2-benzoxazol-3-ol, D-3-phosphoglycerate dehydrogenase
Authors:Unterlass, J.E, Basle, A, Blackburn, T.J, Tucker, J, Cano, C, Noble, M.E.M, Curtin, N.J.
Deposit date:2017-05-14
Release date:2017-06-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Validating and enabling phosphoglycerate dehydrogenase (PHGDH) as a target for fragment-based drug discovery in PHGDH-amplified breast cancer.
Oncotarget, 9, 2018
7TTC
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BU of 7ttc by Molmil
BamABCDE bound to substrate EspP
Descriptor: 2,3-dideoxy-6-O-[2-deoxy-4-O-phosphono-2-(tetradecanoylamino)-alpha-L-gulopyranosyl]-1-O-phosphono-beta-D-threo-hexopyranose, Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, ...
Authors:Doyle, M.T, Jimah, J.R, Dowdy, T, Ohlemacher, S.I, Larion, M, Hinshaw, J.E, Bernstein, H.D.
Deposit date:2022-02-01
Release date:2022-03-30
Last modified:2022-04-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structures reveal multiple stages of bacterial outer membrane protein folding.
Cell, 185, 2022
7TT7
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BU of 7tt7 by Molmil
BamABCDE bound to substrate EspP in the barrelized EspP/continuous open BamA state
Descriptor: Maltose/maltodextrin-binding periplasmic protein,Serine protease EspP chimera, Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamC, ...
Authors:Doyle, M.T, Jimah, J.R, Dowdy, T, Ohlemacher, S.I, Larion, M, Hinshaw, J.E, Bernstein, H.D.
Deposit date:2022-01-31
Release date:2022-03-30
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Cryo-EM structures reveal multiple stages of bacterial outer membrane protein folding.
Cell, 185, 2022
2O2O
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BU of 2o2o by Molmil
Solution structure of domain B from human CIN85 PROTEIN
Descriptor: SH3-domain kinase-binding protein 1
Authors:Ababou, A, Pfuhl, M, Dikic, I, Ladbury, J.E.
Deposit date:2006-11-30
Release date:2007-11-13
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Investigation of Domain B from Human Cin85 Protein: Structure, Dynamics and Proline-Rich Motif Binding
To be Published
7TT6
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BU of 7tt6 by Molmil
BamABCDE bound to substrate EspP in the intermediate-open EspP state
Descriptor: Maltose/maltodextrin-binding periplasmic protein,Serine protease EspP chimera, Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamC, ...
Authors:Doyle, M.T, Jimah, J.R, Dowdy, T, Ohlemacher, S.I, Larion, M, Hinshaw, J.E, Bernstein, H.D.
Deposit date:2022-01-31
Release date:2022-03-30
Last modified:2022-04-13
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Cryo-EM structures reveal multiple stages of bacterial outer membrane protein folding.
Cell, 185, 2022
1Q5O
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BU of 1q5o by Molmil
HCN2J 443-645 in the presence of cAMP, selenomethionine derivative
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
Authors:Zagotta, W.N, Olivier, N.B, Black, K.D, Young, E.C, Olson, R, Gouaux, J.E.
Deposit date:2003-08-08
Release date:2003-09-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:STRUCTURAL BASIS FOR MODULATION AND AGONIST SPECIFICITY OF HCN PACEMAKER CHANNELS
Nature, 425, 2003
5O8A
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BU of 5o8a by Molmil
Crystal Structure of rsEGFP2 in the non-fluorescent off-state determined by SFX
Descriptor: Green fluorescent protein
Authors:Coquelle, N, Sliwa, M, Woodhouse, J, Schiro, G, Adam, V, Aquila, A, Barends, T.R.M, Boutet, S, Byrdin, M, Carbajo, S, De la Mora, E, Doak, R.B, Feliks, M, Fieschi, F, Foucar, L, Guillon, V, Hilpert, M, Hunter, M, Jakobs, S, Koglin, J.E, Kovacsova, G, Lane, T.J, Levy, B, Liang, M, Nass, K, Ridard, J, Robinson, J.S, Roome, C.M, Ruckebusch, C, Seaberg, M, Thepaut, M, Cammarata, M, Demachy, I, Field, M, Shoeman, R.L, Bourgeois, D, Colletier, J.P, Schlichting, I, Weik, M.
Deposit date:2017-06-12
Release date:2017-09-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Chromophore twisting in the excited state of a photoswitchable fluorescent protein captured by time-resolved serial femtosecond crystallography.
Nat Chem, 10, 2018

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