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PDB: 6651 results

1TTB
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THE X-RAY CRYSTAL STRUCTURE REFINEMENTS OF NORMAL HUMAN TRANSTHYRETIN AND THE AMYLOIDOGENIC VAL30MET VARIANT TO 1.7 ANGSTROMS RESOLUTION
Descriptor: TRANSTHYRETIN
Authors:Steinrauf, L.K, Hamilton, J.A, Braden, B.C.
Deposit date:1992-11-02
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The x-ray crystal structure refinements of normal human transthyretin and the amyloidogenic Val-30-->Met variant to 1.7-A resolution.
J.Biol.Chem., 268, 1993
3EXU
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A glycoside hydrolase family 11 xylanase with an extended thumb region
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Endo-1,4-beta-xylanase, GLYCEROL
Authors:Vandermarliere, E, Pollet, A, Strelkov, S.V, Delcour, J.A, Courtin, C.M.
Deposit date:2008-10-17
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystallographic and activity-based evidence for thumb flexibility and its relevance in glycoside hydrolase family 11 xylanases
Proteins, 77, 2009
1UGI
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URACIL-DNA GLYCOSYLASE INHIBITOR PROTEIN
Descriptor: IMIDAZOLE, SULFATE ION, URACIL-DNA GLYCOSYLASE INHIBITOR
Authors:Putnam, C.D, Arvai, A.S, Mol, C.D, Tainer, J.A.
Deposit date:1998-11-04
Release date:1999-03-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Protein mimicry of DNA from crystal structures of the uracil-DNA glycosylase inhibitor protein and its complex with Escherichia coli uracil-DNA glycosylase
J.Mol.Biol., 287, 1999
1KJM
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TAP-A-associated rat MHC class I molecule
Descriptor: B6 Peptide, RT1 class I histocompatibility antigen, AA alpha chain, ...
Authors:Rudolph, M.G, Stevens, J, Speir, J.A, Trowsdale, J, Butcher, G.W, Joly, E, Wilson, I.A.
Deposit date:2001-12-04
Release date:2002-12-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structures of two rat MHC class Ia (RT1-A) molecules that are associated differentially with peptide transporter alleles TAP-A and TAP-B.
J.Mol.Biol., 324, 2002
1LU9
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Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylobacterium extorquens AM1
Descriptor: Methylene Tetrahydromethanopterin Dehydrogenase
Authors:Ermler, U, Hagemeier, C.H, Roth, A, Demmer, U, Grabarse, W, Warkentin, E, Vorholt, J.A.
Deposit date:2002-05-22
Release date:2002-09-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of methylene-tetrahydromethanopterin dehydrogenase from methylobacterium extorquens AM1.
Structure, 10, 2002
3FBW
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Structure of Rhodococcus rhodochrous haloalkane dehalogenase DhaA mutant C176Y
Descriptor: BENZOIC ACID, CHLORIDE ION, Haloalkane dehalogenase, ...
Authors:Dohnalek, J, Stsiapanava, A, Gavira, J.A, Kuta Smatanova, I, Kuty, M.
Deposit date:2008-11-20
Release date:2009-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Atomic resolution studies of haloalkane dehalogenases DhaA04, DhaA14 and DhaA15 with engineered access tunnels.
Acta Crystallogr.,Sect.D, 66, 2010
3F5E
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Crystal structure of Toxoplasma gondii micronemal protein 1 bound to 2'F-3'SiaLacNAc1-3
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Garnett, J.A, Liu, Y, Feizi, T, Matthews, S.J.
Deposit date:2008-11-03
Release date:2009-07-28
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Detailed insights from microarray and crystallographic studies into carbohydrate recognition by microneme protein 1 (MIC1) of Toxoplasma gondii.
Protein Sci., 18, 2009
7QG6
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Co-crystal structure of UPF3A-RRM-NOPS-L with UPF2-MIF4GIII
Descriptor: CHLORIDE ION, Regulator of nonsense transcripts 2, Regulator of nonsense transcripts 3A, ...
Authors:Powers, K.T, Bufton, J.C, Szeto, J.A, Schaffitzel, C.
Deposit date:2021-12-07
Release date:2022-07-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structures of nonsense-mediated mRNA decay factors UPF3B and UPF3A in complex with UPF2 reveal molecular basis for competitive binding and for neurodevelopmental disorder-causing mutation.
Nucleic Acids Res., 50, 2022
7Q64
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Cryo-em structure of the Nup98 fibril polymorph 1
Descriptor: Nuclear pore complex protein Nup98
Authors:Ibanez de Opakua, A, Geraets, J.A, Frieg, B, Dienemann, C, Savastano, A, Rankovic, M, Cima-Omori, M.-S, Schroeder, G.F, Zweckstetter, M.
Deposit date:2021-11-05
Release date:2022-10-12
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Molecular interactions of FG nucleoporin repeats at high resolution.
Nat.Chem., 14, 2022
7Q67
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Cryo-em structure of the Nup98 fibril polymorph 4
Descriptor: Nuclear pore complex protein Nup98
Authors:Ibanez de Opakua, A, Geraets, J.A, Frieg, B, Dienemann, C, Savastano, A, Rankovic, M, Cima-Omori, M.-S, Schroeder, G.F, Zweckstetter, M.
Deposit date:2021-11-05
Release date:2022-10-12
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Molecular interactions of FG nucleoporin repeats at high resolution.
Nat.Chem., 14, 2022
7Q65
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Cryo-em structure of the Nup98 fibril polymorph 2
Descriptor: Nuclear pore complex protein Nup98
Authors:Ibanez de Opakua, A, Geraets, J.A, Frieg, B, Dienemann, C, Savastano, A, Rankovic, M, Cima-Omori, M.-S, Schroeder, G.F, Zweckstetter, M.
Deposit date:2021-11-05
Release date:2022-10-12
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Molecular interactions of FG nucleoporin repeats at high resolution.
Nat.Chem., 14, 2022
7Q66
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Cryo-em structure of the Nup98 fibril polymorph 3
Descriptor: Nuclear pore complex protein Nup98
Authors:Ibanez de Opakua, A, Geraets, J.A, Frieg, B, Dienemann, C, Savastano, A, Rankovic, M, Cima-Omori, M.-S, Schroeder, G.F, Zweckstetter, M.
Deposit date:2021-11-05
Release date:2022-10-12
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:Molecular interactions of FG nucleoporin repeats at high resolution.
Nat.Chem., 14, 2022
3F5A
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BU of 3f5a by Molmil
Crystal structure of Toxoplasma gondii micronemal protein 1 bound to 3'SiaLacNAc1-3
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Garnett, J.A, Liu, Y, Feizi, T, Matthews, S.J.
Deposit date:2008-11-03
Release date:2009-07-28
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Detailed insights from microarray and crystallographic studies into carbohydrate recognition by microneme protein 1 (MIC1) of Toxoplasma gondii.
Protein Sci., 18, 2009
1KZW
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BU of 1kzw by Molmil
Solution structure of Human Intestinal Fatty acid binding protein
Descriptor: INTESTINAL FATTY ACID-BINDING PROTEIN (A54)
Authors:Zhang, F, Luecke, C, Baier, L.J, Sacchettini, J.C, Hamilton, J.A.
Deposit date:2002-02-08
Release date:2003-07-01
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of human intestinal fatty acid binding protein with a naturally-occurring single amino acid substitution (A54T) that is associated with altered lipid metabolism
Biochemistry, 42, 2003
3FK4
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Crystal structure of RuBisCO-like protein from Bacillus Cereus ATCC 14579
Descriptor: RuBisCO-like protein
Authors:Fedorov, A.A, Fedorov, E.V, Imker, H.J, Burley, S.K, Gerlt, J.A, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-12-15
Release date:2009-01-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of RuBisCO-like protein from Bacillus Cereus ATCC 14579
To be Published
3F53
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Crystal structure of Toxoplasma gondii micronemal protein 1 bound to 2F-3'SiaLacNAc
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Garnett, J.A.
Deposit date:2008-11-03
Release date:2009-07-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Detailed insights from microarray and crystallographic studies into carbohydrate recognition by microneme protein 1 (MIC1) of Toxoplasma gondii.
Protein Sci., 18, 2009
7Q9X
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Crystal structure of Chromobacterium violaceum aminotransferase in complex with PLP-pyruvate adduct
Descriptor: (3E)-4-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}-2-oxobut-3-enoic acid, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Isupov, M.N, Mitchell, D, Sayer, C, Littlechild, J.A.
Deposit date:2021-11-15
Release date:2022-11-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Aminotransferase from Chromobacterium violaceum in complex with PLP-pyruvate adduct.
To Be Published
3EW5
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BU of 3ew5 by Molmil
Structure of the tetragonal crystal form of X (ADRP) domain from FCoV
Descriptor: CHLORIDE ION, SN-GLYCEROL-1-PHOSPHATE, SULFATE ION, ...
Authors:Wojdyla, J.A, Manolaridis, I, Tucker, P.A.
Deposit date:2008-10-14
Release date:2009-10-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of the X (ADRP) domain of nsp3 from feline coronavirus
Acta Crystallogr.,Sect.D, 65, 2009
7Q9Z
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Crystal structure of Chromobacterium violaceum aminotransferase in complex with PLP-pyruvate adduct
Descriptor: (3E)-4-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}-2-oxobut-3-enoic acid, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Isupov, M.N, Mitchell, D, Sayer, C, Littlechild, J.A.
Deposit date:2021-11-15
Release date:2022-11-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Aminotransferase from Chromobacterium violaceum in complex with PLP-pyruvate adduct.
To Be Published
7QEK
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Structure of the ligand binding domain of the antibiotic biosynthesis regulator AdmX from the rhizobacterium Serratia plymuthica A153 bound to the auxin indole-3-piruvic acid (IPA).
Descriptor: 3-(1H-INDOL-3-YL)-2-OXOPROPANOIC ACID, MAGNESIUM ION, regulator AdmX
Authors:Gavira, J.A, Rico-Jimenez, M, Castellvi, A, Krell, T, Matilla, M.A.
Deposit date:2021-12-03
Release date:2022-12-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Emergence of an Auxin Sensing Domain in Plant-Associated Bacteria.
Mbio, 14, 2023
7QEJ
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Structure of the ligand binding domain of the antibiotic biosynthesis regulator AdmX from the rhizobacterium Serratia plymuthica A153 bound to the auxin indole-3-acetic acid (IAA).
Descriptor: 1H-INDOL-3-YLACETIC ACID, MAGNESIUM ION, TRANSCRIPTIONAL REGULATOR AdmX
Authors:Gavira, J.A, Rico-Jimenez, M, Castellvi, A, Krell, T, Matilla, M.A.
Deposit date:2021-12-03
Release date:2022-12-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Emergence of an Auxin Sensing Domain in Plant-Associated Bacteria.
Mbio, 14, 2023
7QTR
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GB1 in mammalian cells, 50 uM
Descriptor: Immunoglobulin G-binding protein G
Authors:Gerez, J.A, Prymaczok, N.C, Kadavath, H, Gosh, D, Butikofer, M, Guntert, P, Riek, R.
Deposit date:2022-01-15
Release date:2022-12-21
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Protein structure determination in human cells by in-cell NMR and a reporter system to optimize protein delivery or transexpression.
Commun Biol, 5, 2022
3F9M
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BU of 3f9m by Molmil
Human pancreatic glucokinase in complex with glucose and activator showing a mobile flap
Descriptor: 2-AMINO-4-FLUORO-5-[(1-METHYL-1H-IMIDAZOL-2-YL)SULFANYL]-N-(1,3-THIAZOL-2-YL)BENZAMIDE, Glucokinase, alpha-D-glucopyranose
Authors:Petit, P, Gluais, L, Lagarde, A, Vuillard, L, Boutin, J.A, Ferry, G.
Deposit date:2008-11-14
Release date:2008-12-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The active conformation of human glucokinase is not altered by allosteric activators
Acta Crystallogr.,Sect.D, 67, 2011
7QTS
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GB1 in mammalian cells, 10 uM
Descriptor: Immunoglobulin G-binding protein G
Authors:Gerez, J.A, Prymaczok, N.C, Kadavath, H, Gosh, D, Butikofer, M, Guntert, P, Riek, R.
Deposit date:2022-01-15
Release date:2022-12-21
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Protein structure determination in human cells by in-cell NMR and a reporter system to optimize protein delivery or transexpression.
Commun Biol, 5, 2022
1TYF
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THE STRUCTURE OF CLPP AT 2.3 ANGSTROM RESOLUTION SUGGESTS A MODEL FOR ATP-DEPENDENT PROTEOLYSIS
Descriptor: CLP PEPTIDASE
Authors:Wang, J, Hartling, J.A, Flanagan, J.M.
Deposit date:1997-10-13
Release date:1998-06-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The structure of ClpP at 2.3 A resolution suggests a model for ATP-dependent proteolysis.
Cell(Cambridge,Mass.), 91, 1997

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