Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 6626 results

3DZ3
DownloadVisualize
BU of 3dz3 by Molmil
Human AdoMetDC F223A mutant with covalently bound S-Adenosylmethionine methyl ester
Descriptor: 1,4-DIAMINOBUTANE, S-ADENOSYLMETHIONINE METHYL ESTER, S-adenosylmethionine decarboxylase alpha chain, ...
Authors:Bale, S, McCloskey, D.E, Pegg, A.E, Secrist III, J.A, Guida, W.C, Ealick, S.E.
Deposit date:2008-07-29
Release date:2009-03-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:New Insights into the Design of Inhibitors of Human S-Adenosylmethionine Decarboxylase: Studies of Adenine C8 Substitution in Structural Analogues of S-Adenosylmethionine
J.Med.Chem., 52, 2009
1QGZ
DownloadVisualize
BU of 1qgz by Molmil
FERREDOXIN:NADP+ REDUCTASE MUTANT WITH LEU 78 REPLACED BY ASP (L78D)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, PROTEIN (FERREDOXIN:NADP+ REDUCTASE), SULFATE ION
Authors:Hermoso, J.A, Mayoral, T, Medina, M, Sanz-Aparicio, J, Gomez-Moreno, C.
Deposit date:1999-05-10
Release date:2002-02-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Role of a cluster of hydrophobic residues near the FAD cofactor in Anabaena PCC 7119 ferredoxin-NADP+ reductase for optimal complex formation and electron transfer to ferredoxin.
J.Biol.Chem., 276, 2001
1QMZ
DownloadVisualize
BU of 1qmz by Molmil
PHOSPHORYLATED CDK2-CYCLYIN A-SUBSTRATE PEPTIDE COMPLEX
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CELL DIVISION PROTEIN KINASE 2, G2/MITOTIC-SPECIFIC CYCLIN A, ...
Authors:Brown, N.R, Noble, M.E.M, Endicott, J.A, Johnson, L.N.
Deposit date:1999-10-11
Release date:1999-12-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Structural Basis for Specificity of Substrate and Recruitment Peptides for Cyclin-Dependent Kinases
Nat.Cell Biol., 1, 1999
1QNM
DownloadVisualize
BU of 1qnm by Molmil
HUMAN MANGANESE SUPEROXIDE DISMUTASE MUTANT Q143N
Descriptor: MANGANESE (II) ION, MANGANESE SUPEROXIDE DISMUTASE
Authors:Guan, Y, Tainer, J.A.
Deposit date:1997-07-03
Release date:1998-01-07
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Probing the active site of human manganese superoxide dismutase: the role of glutamine 143.
Biochemistry, 37, 1998
1Q97
DownloadVisualize
BU of 1q97 by Molmil
The structure of the Saccharomyces cerevisiae SR protein kinase, Sky1p, with bound ATP
Descriptor: ADENOSINE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Nolen, B, Ngo, J, Chakrabarti, S, Vu, D, Adams, J.A, Ghosh, G.
Deposit date:2003-08-22
Release date:2003-09-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Nucleotide-Induced Conformational Changes in the Saccharomyces cerevisiae SR Protein Kinase, Sky1p, Revealed by X-ray Crystallography
Biochemistry, 42, 2003
6AWQ
DownloadVisualize
BU of 6awq by Molmil
Anomalous chloride signal reveals the position of sertraline complexed with the serotonin transporter at the central site
Descriptor: (1S,4S)-4-(3,4-dichlorophenyl)-N-methyl-1,2,3,4-tetrahydronaphthalen-1-amine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 8B6 antibody FAB heavy chain, ...
Authors:Coleman, J.A, Gouaux, E.
Deposit date:2017-09-06
Release date:2017-10-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (4.046 Å)
Cite:Structural basis for recognition of diverse antidepressants by the human serotonin transporter.
Nat. Struct. Mol. Biol., 25, 2018
1QBI
DownloadVisualize
BU of 1qbi by Molmil
SOLUBLE QUINOPROTEIN GLUCOSE DEHYDROGENASE FROM ACINETOBACTER CALCOACETICUS
Descriptor: CALCIUM ION, GLYCEROL, PLATINUM (II) ION, ...
Authors:Oubrie, A, Rozeboom, H.J, Kalk, K.H, Duine, J.A, Dijkstra, B.W.
Deposit date:1999-04-22
Release date:2000-02-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:The 1.7 A crystal structure of the apo form of the soluble quinoprotein glucose dehydrogenase from Acinetobacter calcoaceticus reveals a novel internal conserved sequence repeat.
J.Mol.Biol., 289, 1999
1Q6Q
DownloadVisualize
BU of 1q6q by Molmil
Structure of 3-keto-L-gulonate 6-phosphate decarboxylase with bound xylitol 5-phosphate
Descriptor: 3-keto-L-gulonate 6-phosphate decarboxylase, L-XYLITOL 5-PHOSPHATE, MAGNESIUM ION
Authors:Wise, E.L, Yew, W.S, Gerlt, J.A, Rayment, I.
Deposit date:2003-08-13
Release date:2003-10-28
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.695 Å)
Cite:Structural Evidence for a 1,2-Enediolate Intermediate in the Reaction Catalyzed by 3-Keto-l-Gulonate 6-Phosphate Decarboxylase, a Member of the Orotidine 5'-Monophosphate Decarboxylase Suprafamily
Biochemistry, 42, 2003
6ASC
DownloadVisualize
BU of 6asc by Molmil
Mre11 dimer in complex with Endonuclease inhibitor PFM04
Descriptor: (5E)-3-butyl-5-[(4-hydroxyphenyl)methylidene]-2-sulfanylidene-1,3-thiazolidin-4-one, 1,2-ETHANEDIOL, MANGANESE (II) ION, ...
Authors:Moiani, D, Arvai, A.S, Tainer, J.A.
Deposit date:2017-08-24
Release date:2018-03-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Targeting Allostery with Avatars to Design Inhibitors Assessed by Cell Activity: Dissecting MRE11 Endo- and Exonuclease Activities.
Meth. Enzymol., 601, 2018
6AT8
DownloadVisualize
BU of 6at8 by Molmil
1.1 Angstrom Resolution Structure of Human Cellular Retinol-Binding Protein IV
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Retinoid-binding protein 7
Authors:Silvaroli, J.A, Pleshinger, M.J, Kiser, P.D, Golczak, M.
Deposit date:2017-08-28
Release date:2017-09-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.105 Å)
Cite:1.1 Angstrom Resolution Structure of Human Cellular Retinol-Binding Protein IV
To Be Published
6APQ
DownloadVisualize
BU of 6apq by Molmil
Anti-Marburgvirus Nucleoprotein Single Domain Antibody B
Descriptor: Anti-Marburgvirus Nucleoprotein Single Domain Antibody B, CHLORIDE ION, SODIUM ION
Authors:Taylor, A.B, Garza, J.A.
Deposit date:2017-08-17
Release date:2017-10-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Unveiling a Drift Resistant Cryptotope withinMarburgvirusNucleoprotein Recognized by Llama Single-Domain Antibodies.
Front Immunol, 8, 2017
1QB3
DownloadVisualize
BU of 1qb3 by Molmil
CRYSTAL STRUCTURE OF THE CELL CYCLE REGULATORY PROTEIN CKS1
Descriptor: CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT
Authors:Bourne, Y, Watson, M.H, Arvai, A.S, Bernstein, S.L, Reed, S.I, Tainer, J.A.
Deposit date:1999-04-30
Release date:2000-08-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure and mutational analysis of the Saccharomyces cerevisiae cell cycle regulatory protein Cks1: implications for domain swapping, anion binding and protein interactions.
Structure Fold.Des., 8, 2000
1QES
DownloadVisualize
BU of 1qes by Molmil
TANDEM GU MISMATCHES IN RNA, NMR, 30 STRUCTURES
Descriptor: RNA (5'-R(*GP*GP*AP*GP*UP*UP*CP*C)-3')
Authors:Mcdowell, J.A, He, L, Chen, X, Turner, D.H.
Deposit date:1997-03-04
Release date:1997-06-05
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Investigation of the structural basis for thermodynamic stabilities of tandem GU wobble pairs: NMR structures of (rGGAGUUCC)2 and (rGGAUGUCC)2.
Biochemistry, 36, 1997
3HBP
DownloadVisualize
BU of 3hbp by Molmil
The crystal structure of C185S mutant of recombinant sulfite oxidase with bound substrate, sulfite, at the active site
Descriptor: HYDROXY(DIOXO)MOLYBDENUM, PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7,8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER, SULFITE ION, ...
Authors:Qiu, J.A.
Deposit date:2009-05-04
Release date:2010-04-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The structures of the C185S and C185A mutants of sulfite oxidase reveal rearrangement of the active site.
Biochemistry, 49, 2010
3ES7
DownloadVisualize
BU of 3es7 by Molmil
Crystal structure of divergent enolase from Oceanobacillus Iheyensis complexed with Mg and L-malate.
Descriptor: (2S)-2-hydroxybutanedioic acid, MAGNESIUM ION, Muconate cycloisomerase
Authors:Fedorov, A.A, Fedorov, E.V, Sauder, J.M, Burley, S.K, Gerlt, J.A, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-10-04
Release date:2008-10-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Computation-facilitated assignment of the function in the enolase superfamily: a regiochemically distinct galactarate dehydratase from Oceanobacillus iheyensis .
Biochemistry, 48, 2009
6DAO
DownloadVisualize
BU of 6dao by Molmil
NahE WT selenomethionine
Descriptor: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase
Authors:Medellin, B.P, LeVieux, J.A, Zhang, Y.J, Whitman, C.P.
Deposit date:2018-05-01
Release date:2019-05-08
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (1.939 Å)
Cite:Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily.
Biochemistry, 57, 2018
1QUM
DownloadVisualize
BU of 1qum by Molmil
CRYSTAL STRUCTURE OF ESCHERICHIA COLI ENDONUCLEASE IV IN COMPLEX WITH DAMAGED DNA
Descriptor: 5'-D(*(3DR)P*CP*GP*AP*CP*GP*A)-3', 5'-D(*CP*GP*TP*CP*C)-3', 5'-D(*TP*CP*GP*TP*CP*GP*GP*GP*GP*AP*CP*G)-3', ...
Authors:Hosfield, D.J, Guan, Y, Haas, B.J, Cunningham, R.P, Tainer, J.A.
Deposit date:1999-07-01
Release date:1999-08-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure of the DNA repair enzyme endonuclease IV and its DNA complex: double-nucleotide flipping at abasic sites and three-metal-ion catalysis.
Cell(Cambridge,Mass.), 98, 1999
6DS9
DownloadVisualize
BU of 6ds9 by Molmil
Elongated version of a de novo designed three helix bundle structure (GRa3D)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, THIOCYANATE ION, ...
Authors:Koebke, K.J, Ruckthong, L.R, Meagher, J.L, Stuckey, J.A, Pecoraro, V.L.
Deposit date:2018-06-13
Release date:2018-10-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Clarifying the Copper Coordination Environment in a de Novo Designed Red Copper Protein.
Inorg Chem, 57, 2018
1QH0
DownloadVisualize
BU of 1qh0 by Molmil
FERREDOXIN:NADP+ REDUCTASE MUTANT WITH LEU 76 MUTATED BY ASP AND LEU 78 MUTATED BY ASP
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, PROTEIN (FERREDOXIN:NADP+ REDUCTASE), SULFATE ION
Authors:Hermoso, J.A, Mayoral, T, Medina, M, Martinez-Ripoll, M, Martinez-Julvez, M, Sanz-Aparicio, J, Gomez-Moreno, C.
Deposit date:1999-05-10
Release date:2002-02-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Role of a cluster of hydrophobic residues near the FAD cofactor in Anabaena PCC 7119 ferredoxin-NADP+ reductase for optimal complex formation and electron transfer to ferredoxin.
J.Biol.Chem., 276, 2001
3EY0
DownloadVisualize
BU of 3ey0 by Molmil
A new form of DNA-drug interaction in the minor groove of a coiled coil
Descriptor: 1,5-BIS(4-AMIDINOPHENOXY)PENTANE, 5'-D(*DAP*DTP*DAP*DTP*DAP*DTP*DAP*DTP*DAP*DT)-3', MAGNESIUM ION
Authors:Pous, J, Moreno, T, Subirana, J.A, Campos, J.L.
Deposit date:2008-10-17
Release date:2009-10-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Coiled-coil conformation of a pentamidine-DNA complex
Acta Crystallogr.,Sect.D, 66, 2010
1QM4
DownloadVisualize
BU of 1qm4 by Molmil
Methionine Adenosyltransferase Complexed with a L-Methionine Analogue
Descriptor: L-2-AMINO-4-METHOXY-CIS-BUT-3-ENOIC ACID, MAGNESIUM ION, METHIONINE ADENOSYLTRANSFERASE, ...
Authors:Gonzalez, B, Pajares, M.A, Hermoso, J.A, Sanz-Aparicio, J.
Deposit date:1999-09-20
Release date:2000-09-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:The Crystal Structure of Tetrameric Methionine Adenosyltransferase from Rat Liver Reveals the Methionine-Binding Site
J.Mol.Biol., 300, 2000
1QTW
DownloadVisualize
BU of 1qtw by Molmil
HIGH-RESOLUTION CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI DNA REPAIR ENZYME ENDONUCLEASE IV
Descriptor: ENDONUCLEASE IV, ZINC ION
Authors:Hosfield, D.J, Guan, Y, Haas, B.J, Cunningham, R.P, Tainer, J.A.
Deposit date:1999-06-29
Release date:1999-08-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Structure of the DNA repair enzyme endonuclease IV and its DNA complex: double-nucleotide flipping at abasic sites and three-metal-ion catalysis.
Cell(Cambridge,Mass.), 98, 1999
1PY0
DownloadVisualize
BU of 1py0 by Molmil
Crystal structure of E51C/E54C Psaz from A.faecalis with CLaNP probe
Descriptor: 7,10,13-TRI(CARBOXYMETHYL)-5,15-DIOXO-4,7,10,13,16-PENTAAZA-1,19-DITHIANONADECANE, Pseudoazurin, SULFATE ION, ...
Authors:Prudencio, M, Rohovec, J, Peters, J.A, Tocheva, E, Boulanger, M.J, Murphy, M.E, Hupkes, H.J, Kosters, W, Impagliazzo, A, Ubbink, M.
Deposit date:2003-07-07
Release date:2004-12-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:A caged lanthanide complex as a paramagnetic shift agent for protein NMR.
Chemistry, 10, 2004
1Q3D
DownloadVisualize
BU of 1q3d by Molmil
GSK-3 Beta complexed with Staurosporine
Descriptor: GLYCOGEN SYNTHASE KINASE-3 BETA, STAUROSPORINE
Authors:Bertrand, J.A, Thieffine, S, Vulpetti, A, Cristiani, C, Valsasina, B, Knapp, S, Kalisz, H.M, Flocco, M.
Deposit date:2003-07-29
Release date:2003-10-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Characterization of the Gsk-3Beta Active Site Using Selective and Non-selective ATP-Mimetic Inhibitors
J.Mol.Biol., 333, 2003
3EW5
DownloadVisualize
BU of 3ew5 by Molmil
Structure of the tetragonal crystal form of X (ADRP) domain from FCoV
Descriptor: CHLORIDE ION, SN-GLYCEROL-1-PHOSPHATE, SULFATE ION, ...
Authors:Wojdyla, J.A, Manolaridis, I, Tucker, P.A.
Deposit date:2008-10-14
Release date:2009-10-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of the X (ADRP) domain of nsp3 from feline coronavirus
Acta Crystallogr.,Sect.D, 65, 2009

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon