Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42507 results

7U4S
DownloadVisualize
BU of 7u4s by Molmil
Structure of Glyceraldehyde-3-Phosphate Dehydrogenase from Candida albicans
Descriptor: GLYCEROL, Glyceraldehyde-3-phosphate dehydrogenase
Authors:Miranda, R.R, Silva, M, Iulek, J.
Deposit date:2022-02-28
Release date:2022-04-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Expression, purification, crystallization and structure of Glyceraldehyde-3-Phosphate Dehydrogenase from Candida albicans, main causative agent of candidiasis
Chem. Data Coll., 39, 2022
6UEK
DownloadVisualize
BU of 6uek by Molmil
Structure of Urocanate Hydratase from Trypanosoma cruzi in complex with NAD+
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Urocanate hydratase
Authors:Boreiko, S, Silva, M, Melo, R.F.P, Silber, A.M, Iulek, J.
Deposit date:2019-09-21
Release date:2020-01-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structure of Urocanate Hydratase from the protozoan Trypanosoma cruzi.
Int.J.Biol.Macromol., 146, 2019
8QXU
DownloadVisualize
BU of 8qxu by Molmil
In situ structure average of GroEL14-GroES7 complexes with wide GroEL7 trans ring conformation in Escherichia coli cytosol obtained by cryo electron tomography
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Chaperonin GroEL, ...
Authors:Wagner, J, Caravajal, A.I, Beck, F, Bracher, A, Wan, W, Bohn, S, Koerner, R, Baumeister, W, Fernandez-Busnadiego, R, Hartl, F.U.
Deposit date:2023-10-25
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Visualizing chaperonin function in situ by cryo-electron tomography
Nature, 2024
3KG0
DownloadVisualize
BU of 3kg0 by Molmil
Crystal structure of SnoaB, a cofactor-independent oxygenase from Streptomyces nogalater, determined to 1.7 resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, SnoaB
Authors:Koskiniemi, H, Grocholski, T, Lindqvist, Y, Mantsala, P, Niemi, J, Schneider, G.
Deposit date:2009-10-28
Release date:2010-01-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the cofactor-independent monooxygenase SnoaB from Streptomyces nogalater: implications for the reaction mechanism
Biochemistry, 49, 2010
8RH2
DownloadVisualize
BU of 8rh2 by Molmil
Trimeric HSV-2G gB ectodomain in postfusion conformation with three bound HDIT102 Fab molecules.
Descriptor: Envelope glycoprotein B, HDIT102 Fab heavy chain, HDIT102 Fab light chain
Authors:Kalbermatter, D, Seyfizadeh, N, Imhof, T, Ries, M, Mueller, C, Jenner, L, Blumenschein, E, Yendrzheyevskiy, A, Moog, K, Eckert, D, Engel, R, Diebolder, P, Chami, M, Krauss, J, Schaller, T, Arndt, M.
Deposit date:2023-12-14
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Development of a highly effective combination monoclonal antibody therapy against Herpes simplex virus.
J.Biomed.Sci., 31, 2024
8QXV
DownloadVisualize
BU of 8qxv by Molmil
In situ structure average of GroEL14-GroES7 complexes with narrow GroEL7 trans ring conformation in Escherichia coli cytosol obtained by cryo electron tomography
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Chaperonin GroEL, ...
Authors:Wagner, J, Caravajal, A.I, Beck, F, Bracher, A, Wan, W, Bohn, S, Koerner, R, Baumeister, W, Fernandez-Busnadiego, R, Hartl, F.U.
Deposit date:2023-10-25
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (13.6 Å)
Cite:Visualizing chaperonin function in situ by cryo-electron tomography
Nature, 2024
5U6A
DownloadVisualize
BU of 5u6a by Molmil
CRYSTAL STRUCTURE OF I83E MEDITOPE-ENABLED TRASTUZUMAB WITH AZIDO-PEG3-MEDITOPE
Descriptor: Heavy Chain, Immunoglobulin G binding protein A, Light Chain, ...
Authors:Williams, J.C, Bzymek, K.P, Pucket, J, Avery, K.A, Ma, Y, Xie, J, Zer, C, Horne, D.
Deposit date:2016-12-07
Release date:2018-03-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.736 Å)
Cite:Crystal Structure Of I83E Meditope-Enabled Trastuzumab With Azido-PEG3-Meditope
To Be Published
6UKK
DownloadVisualize
BU of 6ukk by Molmil
Crystal Structure of a Domain-swapped Fluorogen Activating Protein DiB3 Dimer
Descriptor: Outer membrane lipoprotein Blc, SODIUM ION
Authors:Bozhanova, N.G, Meiler, J.
Deposit date:2019-10-05
Release date:2020-07-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:DiB-splits: nature-guided design of a novel fluorescent labeling split system.
Sci Rep, 10, 2020
7AQO
DownloadVisualize
BU of 7aqo by Molmil
yeast THO-Sub2 complex dimer
Descriptor: BJ4_G0025130.mRNA.1.CDS.1, EM14S01-3B_G0007820.mRNA.1.CDS.1, TEX1 isoform 1, ...
Authors:Schuller, S.K, Schuller, J.M, Prabu, R.J, Baumgartner, M, Bonneau, F, basquin, J, Conti, E.
Deposit date:2020-10-22
Release date:2020-12-02
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural insights into the nucleic acid remodeling mechanisms of the yeast THO-Sub2 complex.
Elife, 9, 2020
6WBL
DownloadVisualize
BU of 6wbl by Molmil
Cryo-EM structure of human Pannexin 1 channel with deletion of N-terminal helix and C-terminal tail, in complex with CBX
Descriptor: CARBENOXOLONE, Pannexin-1
Authors:Lu, W, Du, J, Ruan, Z.
Deposit date:2020-03-26
Release date:2020-06-03
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (5.13 Å)
Cite:Structures of human pannexin 1 reveal ion pathways and mechanism of gating.
Nature, 584, 2020
6VYG
DownloadVisualize
BU of 6vyg by Molmil
Cryo-EM structure of Plasmodium vivax hexokinase (Closed state)
Descriptor: Phosphotransferase
Authors:Srivastava, S.S, Darling, J.E, Suryadi, J, Morris, J.C, Drew, M.E, Subramaniam, S.
Deposit date:2020-02-26
Release date:2020-05-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Plasmodium vivax and human hexokinases share similar active sites but display distinct quaternary architectures
Iucrj, 7, 2020
8RPR
DownloadVisualize
BU of 8rpr by Molmil
Crystal Structure of SgvM methyltransferase in complex with alpha-ketoleucine and Zn2+ ion
Descriptor: 2-OXO-4-METHYLPENTANOIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Saleem-Batcha, R, Zou, Z, Breiltgens, J, Mueller, M, Andexer, J.N.
Deposit date:2024-01-16
Release date:2024-07-24
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structures and Protein Engineering of the alpha-Keto Acid C-Methyltransferases SgvM and MrsA for Rational Substrate Transfer.
Chembiochem, 2024
3P1C
DownloadVisualize
BU of 3p1c by Molmil
Crystal structure of the bromodomain of human CREBBP in complex with acetylated lysine
Descriptor: CREB-binding protein, N(6)-ACETYLLYSINE, POTASSIUM ION, ...
Authors:Filippakopoulos, P, Picaud, S, Feletar, I, Fedorov, O, Muniz, J, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2010-09-30
Release date:2010-11-24
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Histone recognition and large-scale structural analysis of the human bromodomain family.
Cell(Cambridge,Mass.), 149, 2012
8RWL
DownloadVisualize
BU of 8rwl by Molmil
Crystal structure of Methanopyrus kandleri malate dehydrogenase mutant 1
Descriptor: CHLORIDE ION, GLYCEROL, Malate dehydrogenase, ...
Authors:Coquille, S, Roche, J, Engilberge, S, Girard, E, Madern, D.
Deposit date:2024-02-05
Release date:2024-07-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Navigating the conformational landscape of an enzyme. Stabilization of a low populated conformer by evolutionary mutations triggers Allostery into a non-allosteric enzyme.
To Be Published
3SJ9
DownloadVisualize
BU of 3sj9 by Molmil
crystal structure of the C147A mutant 3C of CVA16 in complex with FAGLRQAVTQ peptide
Descriptor: 3C protease, FAGLRQAVTQ peptide
Authors:Lu, G, Qi, J, Chen, Z, Xu, X, Gao, F, Lin, D, Qian, W, Liu, H, Jiang, H, Yan, J, Gao, G.F.
Deposit date:2011-06-21
Release date:2011-08-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.399 Å)
Cite:Enterovirus 71 and Coxsackievirus A16 3C Proteases: Binding to Rupintrivir and Their Substrates and Anti-Hand, Foot, and Mouth Disease Virus Drug Design.
J.Virol., 85, 2011
3MI7
DownloadVisualize
BU of 3mi7 by Molmil
An Enhanced Repressor of Human Papillomavirus E2 Protein
Descriptor: 1,2-ETHANEDIOL, Regulatory protein E2
Authors:Bohm, A, Baleja, J, Bose, K, Meinke, G.
Deposit date:2010-04-09
Release date:2011-04-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Design and characterization of an enhanced repressor of human papillomavirus E2 protein.
Faseb J., 25, 2011
6W0P
DownloadVisualize
BU of 6w0p by Molmil
Putative kojibiose phosphorylase from human microbiome
Descriptor: Kojibiose phosphorylase
Authors:Dementiev, A, Osipiuk, J, Endres, M, Wakatsuki, S, Hess, M, Joachimiak, A.
Deposit date:2020-03-02
Release date:2020-03-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Putative kojibiose phosphorylase from human microbiome
to be published
7BU5
DownloadVisualize
BU of 7bu5 by Molmil
Crystal Structure of Human SLX4 and MUS81
Descriptor: GLYCINE, MUS81 endonuclease homolog (Yeast), isoform CRA_b, ...
Authors:Wan, B, Wu, J, Lei, M.
Deposit date:2020-04-04
Release date:2021-04-07
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:SLX4 control MUS81 endonuclease function in telomere through an intermolecular SAP domain
To be published
6W3C
DownloadVisualize
BU of 6w3c by Molmil
Structure of phosphorylated apo IRE1
Descriptor: Serine/threonine-protein kinase/endoribonuclease IRE1
Authors:Wallweber, H, Mortara, K, Ferri, E, Wang, W, Rudolph, J.
Deposit date:2020-03-09
Release date:2020-12-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Activation of the IRE1 RNase through remodeling of the kinase front pocket by ATP-competitive ligands.
Nat Commun, 11, 2020
7BUG
DownloadVisualize
BU of 7bug by Molmil
Reduced oxygenase of carbazole 1,9a-dioxygenase
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 2-METHOXYETHANOL, CARBONATE ION, ...
Authors:Matsuzawa, J, Wang, Y.X, Suzuki-Minakuchi, C, Nojiri, H.
Deposit date:2020-04-06
Release date:2021-04-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Reduced oxygenase of carbazole 1,9a-dioxygenase
To Be Published
3S49
DownloadVisualize
BU of 3s49 by Molmil
RNA crystal structure with 2-Se-uridine modification
Descriptor: POTASSIUM ION, RNA (5'-R(*GP*UP*AP*UP*AP*(RUS)P*AP*C)-3')
Authors:Sheng, J, Gan, J, Sun, H, Hassan, A.E.H, Jiang, S, Huang, Z.
Deposit date:2011-05-19
Release date:2011-06-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Higher Specificity of RNA Base Pairing with 2-Selenouridine
To be Published
3S4B
DownloadVisualize
BU of 3s4b by Molmil
Cellobiose phosphorylase from Cellulomonas uda in complex with glucose
Descriptor: Cellobiose phosphorylase, alpha-D-glucopyranose
Authors:Van Hoorebeke, A, Stout, J, Soetaert, W, Van Beeumen, J, Desmet, T, Savvides, S.
Deposit date:2011-05-19
Release date:2012-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Cellobiose phosphorylase: reconstructing the structural itinerary along the catalytic pathway
To be Published
7BUH
DownloadVisualize
BU of 7buh by Molmil
Reduced ferredoxin of carbazole 1,9a-dioxygenase
Descriptor: 1,2-ETHANEDIOL, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin CarAc, ...
Authors:Matsuzawa, J, Wang, Y.X, Suzuki-Minakuchi, C, Nojiri, H.
Deposit date:2020-04-06
Release date:2021-04-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Reduced ferredoxin of carbazole 1,9a-dioxygenase
To Be Published
6W0E
DownloadVisualize
BU of 6w0e by Molmil
Open-gate KcsA soaked in 10 mM BaCl2
Descriptor: BARIUM ION, Fab Heavy Chain, Fab Light Chain, ...
Authors:Rohaim, A, Gong, L, Li, J.
Deposit date:2020-02-29
Release date:2020-07-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.512 Å)
Cite:Open and Closed Structures of a Barium-Blocked Potassium Channel.
J.Mol.Biol., 432, 2020
7BUI
DownloadVisualize
BU of 7bui by Molmil
Complex of reduced oxygenase and oxidized ferredoxin in carbazole 1,9a- dioxygenase
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, FE (II) ION, ...
Authors:Matsuzawa, J, Wang, Y.X, Suzuki-Minakuchi, C, Nojiri, H.
Deposit date:2020-04-06
Release date:2021-04-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Complex of reduced oxygenase and oxidized ferredoxin in carbazole 1,9a- dioxygenase
To Be Published

223790

数据于2024-08-14公开中

PDB statisticsPDBj update infoContact PDBjnumon