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PDB: 42254 results

2FJ3
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NMR solution of rabbit Prion Protein (91-228)
Descriptor: Major prion protein
Authors:Li, J, Lin, D.H.
Deposit date:2005-12-31
Release date:2006-12-31
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Unique structural characteristics of the rabbit prion protein
J.Biol.Chem., 285, 2010
2EX3
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Bacteriophage phi29 DNA polymerase bound to terminal protein
Descriptor: DNA polymerase, DNA terminal protein, LEAD (II) ION
Authors:Kamtekar, S, Berman, A.J, Wang, J, de Vega, M, Blanco, L, Salas, M, Steitz, T.A.
Deposit date:2005-11-07
Release date:2006-03-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:The phi29 DNA polymerase:protein-primer structure suggests a model for the initiation to elongation transition
Embo J., 25, 2006
2FFB
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BU of 2ffb by Molmil
The crystal structure of the HlyB-NBD E631Q mutant in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Alpha-hemolysin translocation ATP-binding protein hlyB
Authors:Zaitseva, J, Oswald, C, Jumpertz, T, Jenewein, S, Holland, I.B, Schmitt, L.
Deposit date:2005-12-19
Release date:2006-08-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A structural analysis of asymmetry required for catalytic activity of an ABC-ATPase domain dimer.
Embo J., 25, 2006
2QGS
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BU of 2qgs by Molmil
Crystal structure of SE1688 protein from Staphylococcus epidermidis. Northeast Structural Genomics Consortium target SeR89
Descriptor: Protein SE1688, ZINC ION
Authors:Forouhar, F, Su, M, Benach, J, Seetharaman, J, Chen, C.X, Fang, Y, Cunningham, K, Owen, L, Ma, L.-C, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-06-29
Release date:2007-07-17
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of SE1688 protein from Staphylococcus epidermidis.
To be Published
2FLF
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BU of 2flf by Molmil
Crystal structure of l-fuculose-1-phosphate aldolase from Thermus Thermophilus HB8
Descriptor: fuculose-1-phosphate aldolase
Authors:Jeyakanthan, J, Yokoyama, S, Shiro, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-01-06
Release date:2007-01-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Purification, crystallization and preliminary X-ray crystallographic study of the L-fuculose-1-phosphate aldolase (FucA) from Thermus thermophilus HB8
Acta Crystallogr.,Sect.F, 61, 2005
2F64
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Crystal structure of Nucleoside 2-deoxyribosyltransferase from Trypanosoma brucei at 1.6 A resolution with 1-METHYLQUINOLIN-2(1H)-ONE bound
Descriptor: 1-METHYLQUINOLIN-2(1H)-ONE, GLYCEROL, Nucleoside 2-deoxyribosyltransferase, ...
Authors:Bosch, J, Robien, M.A, Hol, W.G.J, Structural Genomics of Pathogenic Protozoa Consortium (SGPP)
Deposit date:2005-11-28
Release date:2005-12-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Using fragment cocktail crystallography to assist inhibitor design of Trypanosoma brucei nucleoside 2-deoxyribosyltransferase.
J.Med.Chem., 49, 2006
2F74
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Murine MHC class I H-2Db in complex with human b2-microglobulin and LCMV-derived immunodminant peptide gp33
Descriptor: Beta-2-microglobulin, H-2 class I histocompatibility antigen, D-B alpha chain, ...
Authors:Achour, A, Michaelsson, J, Harris, R.A, Ljunggren, H.G, Karre, K, Schneider, G, Sandalova, T.
Deposit date:2005-11-30
Release date:2006-02-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Basis of the Differential Stability and Receptor Specificity of H-2D(b) in Complex with Murine versus Human beta(2)-Microglobulin.
J.Mol.Biol., 356, 2006
2FDN
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BU of 2fdn by Molmil
2[4FE-4S] FERREDOXIN FROM CLOSTRIDIUM ACIDI-URICI
Descriptor: FERREDOXIN, IRON/SULFUR CLUSTER
Authors:Dauter, Z, Wilson, K.S, Sieker, L.C, Meyer, J, Moulis, J.M.
Deposit date:1997-10-01
Release date:1998-04-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (0.94 Å)
Cite:Atomic resolution (0.94 A) structure of Clostridium acidurici ferredoxin. Detailed geometry of [4Fe-4S] clusters in a protein.
Biochemistry, 36, 1997
2FPV
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Dual binding mode of a novel series of DHODH inhibitors
Descriptor: 3-{[(3-FLUORO-3'-METHOXYBIPHENYL-4-YL)AMINO]CARBONYL}THIOPHENE-2-CARBOXYLIC ACID, ACETATE ION, Dihydroorotate dehydrogenase, ...
Authors:Baumgartner, R, Leban, J.
Deposit date:2006-01-17
Release date:2007-01-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Dual binding mode of a novel series of DHODH inhibitors.
J.Med.Chem., 49, 2006
2FRW
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BU of 2frw by Molmil
Solution structure of the second SH3 domain of human adaptor protein NCK2
Descriptor: Cytoplasmic protein NCK2
Authors:Liu, J.
Deposit date:2006-01-20
Release date:2006-06-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural Insight into the Binding Diversity between the Human Nck2 SH3 Domains and Proline-Rich Proteins
Biochemistry, 45, 2006
2FPT
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Dual Binding Mode of a Novel Series of DHODH inhibitors
Descriptor: 2-({[3,5-DIFLUORO-3'-(TRIFLUOROMETHOXY)BIPHENYL-4-YL]AMINO}CARBONYL)CYCLOPENT-1-ENE-1-CARBOXYLIC ACID, ACETATE ION, Dihydroorotate dehydrogenase, ...
Authors:Baumgartner, R, Walloschek, M, Kralik, M, Gotschlich, A, Tasler, S, Leban, J.
Deposit date:2006-01-17
Release date:2007-01-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Dual binding mode of a novel series of DHODH inhibitors.
J.Med.Chem., 49, 2006
2FRY
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Solution structure of the third SH3 domain of human NCK2 adaptor protein
Descriptor: Cytoplasmic protein NCK2
Authors:Liu, J.
Deposit date:2006-01-20
Release date:2006-06-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural Insight into the Binding Diversity between the Human Nck2 SH3 Domains and Proline-Rich Proteins
Biochemistry, 45, 2006
7P35
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BU of 7p35 by Molmil
Structure of the SARS-CoV-2 3CL protease in complex with rupintrivir
Descriptor: 3C-like proteinase, 4-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE-3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER
Authors:Fabrega-Ferrer, M, Perez-Saavedra, J, Herrera-Morande, A, Coll, M.
Deposit date:2021-07-07
Release date:2021-07-21
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.256 Å)
Cite:Structure and inhibition of SARS-CoV-1 and SARS-CoV-2 main proteases by oral antiviral compound AG7404.
Antiviral Res., 208, 2022
3LFM
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BU of 3lfm by Molmil
Crystal structure of the fat mass and obesity associated (FTO) protein reveals basis for its substrate specificity
Descriptor: 3-methylthymidine, FE (II) ION, N-OXALYLGLYCINE, ...
Authors:Chai, J, Han, Z.
Deposit date:2010-01-18
Release date:2010-04-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the FTO protein reveals basis for its substrate specificity
Nature, 464, 2010
5ZDL
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BU of 5zdl by Molmil
Crystal Structure Analysis of TtQRS in co-crystallised with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, Glutamine--tRNA ligase
Authors:Mutharasappan, N, Jain, V, Sharma, A, Manickam, Y, Jeyaraman, J.
Deposit date:2018-02-23
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and functional analysis of Glutaminyl-tRNA synthetase (TtGlnRS) from Thermus thermophilus HB8 and its complexes
Int. J. Biol. Macromol., 120, 2018
3LRE
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BU of 3lre by Molmil
Crystal Structure Analysis of Human Kinesin-8 Motor Domain
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF18A, MAGNESIUM ION
Authors:Brejc, K, Moores, C.A, Hartman, J.
Deposit date:2010-02-11
Release date:2010-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Insight into the molecular mechanism of the multitasking kinesin-8 motor.
Embo J., 29, 2010
7OSZ
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BU of 7osz by Molmil
Human Prolyl-tRNA Synthetase in Complex with L-proline and Compound 4d
Descriptor: 3-[(2-methylphenyl)methylamino]pyrazine-2-carboxamide, Bifunctional glutamate/proline--tRNA ligase, PROLINE, ...
Authors:Pang, L, Zitko, J, Strelkov, S.V, Weeks, S.D.
Deposit date:2021-06-09
Release date:2021-07-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Towards Novel 3-Aminopyrazinamide-Based Prolyl-tRNA Synthetase Inhibitors: In Silico Modelling, Thermal Shift Assay and Structural Studies.
Int J Mol Sci, 22, 2021
7OT0
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Human Prolyl-tRNA Synthetase in Complex with L-proline and Compound 4h
Descriptor: 3-[(2-chlorophenyl)methylamino]pyrazine-2-carboxamide, Bifunctional glutamate/proline--tRNA ligase, PROLINE, ...
Authors:Pang, L, Zitko, J, Strelkov, S.V, Weeks, S.D.
Deposit date:2021-06-09
Release date:2021-07-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Towards Novel 3-Aminopyrazinamide-Based Prolyl-tRNA Synthetase Inhibitors: In Silico Modelling, Thermal Shift Assay and Structural Studies.
Int J Mol Sci, 22, 2021
7OSY
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Human Prolyl-tRNA Synthetase in Complex with L-proline
Descriptor: Bifunctional glutamate/proline--tRNA ligase, PROLINE, STRONTIUM ION, ...
Authors:Pang, L, Zitko, J, Strelkov, S.V, Weeks, S.D.
Deposit date:2021-06-09
Release date:2021-07-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Towards Novel 3-Aminopyrazinamide-Based Prolyl-tRNA Synthetase Inhibitors: In Silico Modelling, Thermal Shift Assay and Structural Studies.
Int J Mol Sci, 22, 2021
7OT1
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Human Prolyl-tRNA Synthetase in Complex with L-proline and Compound 3c
Descriptor: Bifunctional glutamate/proline--tRNA ligase, PROLINE, STRONTIUM ION, ...
Authors:Pang, L, Zitko, J, Strelkov, S.V, Weeks, S.D.
Deposit date:2021-06-09
Release date:2021-07-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Towards Novel 3-Aminopyrazinamide-Based Prolyl-tRNA Synthetase Inhibitors: In Silico Modelling, Thermal Shift Assay and Structural Studies.
Int J Mol Sci, 22, 2021
7OT2
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Human Prolyl-tRNA Synthetase in Complex with L-proline and Compound 4j
Descriptor: 3-[[2-(trifluoromethyl)phenyl]methylamino]pyrazine-2-carboxamide, Bifunctional glutamate/proline--tRNA ligase, PROLINE, ...
Authors:Pang, L, Zitko, J, Strelkov, S.V, Weeks, S.D.
Deposit date:2021-06-09
Release date:2021-07-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Towards Novel 3-Aminopyrazinamide-Based Prolyl-tRNA Synthetase Inhibitors: In Silico Modelling, Thermal Shift Assay and Structural Studies.
Int J Mol Sci, 22, 2021
7OT3
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Human Prolyl-tRNA Synthetase in Complex with L-proline and Compound 3b
Descriptor: Bifunctional glutamate/proline--tRNA ligase, PROLINE, STRONTIUM ION, ...
Authors:Pang, L, Zitko, J, Strelkov, S.V, Weeks, S.D.
Deposit date:2021-06-09
Release date:2021-07-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Towards Novel 3-Aminopyrazinamide-Based Prolyl-tRNA Synthetase Inhibitors: In Silico Modelling, Thermal Shift Assay and Structural Studies.
Int J Mol Sci, 22, 2021
6TJP
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BU of 6tjp by Molmil
Crystal structure of T7 bacteriophage portal protein, 13mer, closed valve - P212121
Descriptor: Portal protein
Authors:Fabrega-Ferrer, M, Cuervo, A, Fernandez, F.J, Machon, C, Perez-Luque, R, Pous, J, Vega, M.C, Carrascosa, J.L, Coll, M.
Deposit date:2019-11-26
Release date:2020-12-16
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.74 Å)
Cite:Using a partial atomic model from medium-resolution cryo-EM to solve a large crystal structure.
Acta Crystallogr D Struct Biol, 77, 2021
6HUA
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BU of 6hua by Molmil
the competence regulator ComR from Streptococcus vestibularis in complex with its cognate signaling peptide XIP
Descriptor: Uncharacterized protein, XIP signaling peptide
Authors:Nessler, S, Thuillier, J, Ledesma, L, Hols, P.
Deposit date:2018-10-05
Release date:2019-10-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.389 Å)
Cite:Molecular dissection of pheromone selectivity in the competence signaling system ComRS of streptococci.
Proc.Natl.Acad.Sci.USA, 117, 2020
2QL7
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Crystal Structure of Caspase-7 with inhibitor AC-IEPD-CHO
Descriptor: CITRIC ACID, Caspase-7, Inhibitor AC-IEPD_CHO, ...
Authors:Agniswamy, J, Fang, B, Weber, I.
Deposit date:2007-07-12
Release date:2007-08-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Plasticity of S2-S4 specificity pockets of executioner caspase-7 revealed by structural and kinetic analysis.
Febs J., 274, 2007

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