Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42507 件

2K0J
DownloadVisualize
BU of 2k0j by Molmil
Solution structure of CaM complexed to DRP1p
分子名称: CALCIUM ION, LANTHANUM (III) ION, calmodulin
著者Bertini, I, Luchinat, C, Parigi, G, Yuan, J, Structural Proteomics in Europe (SPINE)
登録日2008-02-04
公開日2009-03-10
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Accurate solution structures of proteins from X-ray data and a minimal set of NMR data: calmodulin-peptide complexes as examples.
J.Am.Chem.Soc., 131, 2009
5UCU
DownloadVisualize
BU of 5ucu by Molmil
STRUCTURAL AND MECHANISTIC INSIGHTS INTO HEMOGLOBIN-CATALYZED HYDROGEN SULFIDE OXIDATION AND THE FATE OF POLYSULFIDE PRODUCTS
分子名称: HYDROSULFURIC ACID, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
著者Vitvitsky, V, Yadav, P.K, An, S, Seravalli, J, Cho, U.-S, Banerjee, R.
登録日2016-12-22
公開日2017-03-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.797 Å)
主引用文献Structural and Mechanistic Insights into Hemoglobin-catalyzed Hydrogen Sulfide Oxidation and the Fate of Polysulfide Products.
J. Biol. Chem., 292, 2017
2X31
DownloadVisualize
BU of 2x31 by Molmil
Modelling of the complex between subunits BchI and BchD of magnesium chelatase based on single-particle cryo-EM reconstruction at 7.5 ang
分子名称: MAGNESIUM-CHELATASE 38 KDA SUBUNIT, MAGNESIUM-CHELATASE 60 KDA SUBUNIT
著者Lunqvist, J, Elmlund, H, Peterson Wulff, R, Berglund, L, Elmlund, D, Emanuelsson, C, Hebert, H, Willows, R.D, Hansson, M, Lindahl, M, Al-Karadaghi, S.
登録日2010-01-19
公開日2010-11-10
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (7.5 Å)
主引用文献ATP-Induced Conformational Dynamics in the Aaa+ Motor Unit of Magnesium Chelatase.
Structure, 18, 2010
2WFM
DownloadVisualize
BU of 2wfm by Molmil
Crystal structure of polyneuridine aldehyde esterase mutant (H244A)
分子名称: POLYNEURIDINE ALDEHYDE ESTERASE
著者Yang, L, Hill, M, Panjikar, S, Wang, M, Stoeckigt, J.
登録日2009-04-08
公開日2010-04-21
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Basis and Enzymatic Mechanism of the Biosynthesis of C9- from C10-Monoterpenoid Indole Alkaloids.
Angew.Chem.Int.Ed.Engl., 48, 2009
5UK2
DownloadVisualize
BU of 5uk2 by Molmil
CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
著者Liu, Y, Pan, J, Caradonna, T, Jenni, S, Raymond, D.D, Schmidt, A.G, Harrison, S.C, Grigorieff, N.
登録日2017-01-19
公開日2017-05-31
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface.
J. Mol. Biol., 429, 2017
5UJZ
DownloadVisualize
BU of 5ujz by Molmil
CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
著者Liu, Y, Pan, J, Caradonna, T, Jenni, S, Raymond, D.D, Schmidt, A.G, Harrison, S.C, Grigorieff, N.
登録日2017-01-19
公開日2017-05-31
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface.
J. Mol. Biol., 429, 2017
7EBJ
DownloadVisualize
BU of 7ebj by Molmil
Apo structure of the mouse Trim66 PHD-Bromo dual domain
分子名称: Tripartite motif-containing protein 66, ZINC ION
著者Wang, Z, Jiang, J.
登録日2021-03-09
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A TRIM66/DAX1/Dux axis suppresses the totipotent 2-cell-like state in murine embryonic stem cells.
Cell Stem Cell, 29, 2022
6EWV
DownloadVisualize
BU of 6ewv by Molmil
Solution Structure of Docking Domain Complex of RXP NRPS: Kj12C NDD - Kj12B CDD
分子名称: NRPS Kj12C-NDD, NRPS Kj12B-CDD
著者Hacker, C, Cai, X, Kegler, C, Zhao, L, Weickhmann, A.K, Bode, H.B, Woehnert, J.
登録日2017-11-06
公開日2018-10-31
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Structure-based redesign of docking domain interactions modulates the product spectrum of a rhabdopeptide-synthesizing NRPS.
Nat Commun, 9, 2018
3RKD
DownloadVisualize
BU of 3rkd by Molmil
Hepatitis E Virus E2s domain (Genotype I) in complex with a neutralizing antibody
分子名称: Capsid protein, Monoclonal Antibody, Heavy Chain, ...
著者Tang, X.H, Sivaraman, J.
登録日2011-04-18
公開日2011-06-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for the neutralization and genotype specificity of hepatitis E virus
Proc.Natl.Acad.Sci.USA, 108, 2011
5T62
DownloadVisualize
BU of 5t62 by Molmil
Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 Complex
分子名称: 25S Ribosomal RNA, 5.8S Ribosomal RNA, 5S Ribosomal RNA, ...
著者Malyutin, A.G, Musalgaonkar, S, Patchett, S, Frank, J, Johnson, A.W.
登録日2016-09-01
公開日2017-02-08
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis.
EMBO J., 36, 2017
1O9W
DownloadVisualize
BU of 1o9w by Molmil
F17-aG lectin domain from Escherichia coli in complex with N-acetyl-glucosamine
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, F17A-G FIMBRIAL ADHESIN
著者Buts, L, De Genst, E, Loris, R, Oscarson, S, Lahmann, M, Messens, J, Brosens, E, Wyns, L, Bouckaert, J, De Greve, H.
登録日2002-12-20
公開日2003-05-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The Fimbrial Adhesin F17-G of Enterotoxigenic Escherichia Coli Has an Immunoglobulin-Like Lectin Domain that Binds N-Acetylglucosamine
Mol.Microbiol., 49, 2003
3T3N
DownloadVisualize
BU of 3t3n by Molmil
Molecular basis for the recognition and cleavage of RNA (UUCCGU) by the bifunctional 5'-3' exo/endoribonuclease RNase J
分子名称: Metal dependent hydrolase, O2'methyl-RNA, ZINC ION
著者Dorleans, A, Li de la Sierra-Gallay, I, Piton, J, Zig, L, Gilet, L, Putzer, H, Condon, C.
登録日2011-07-25
公開日2011-10-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Molecular Basis for the Recognition and Cleavage of RNA by the Bifunctional 5'-3' Exo/Endoribonuclease RNase J.
Structure, 19, 2011
2W4U
DownloadVisualize
BU of 2w4u by Molmil
Isometrically contracting insect asynchronous flight muscle quick frozen after a length step
分子名称: ACTIN, ALPHA SKELETAL MUSCLE, TROPOMYOSIN ALPHA-1 CHAIN, ...
著者Wu, S, Liu, J, Reedy, M.C, Tregear, R.T, Winkler, H, Franzini-Armstrong, C, Sasaki, H, Lucaveche, C, Goldman, Y.E, Reedy, M.K, Taylor, K.A.
登録日2008-12-02
公開日2010-08-25
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (35 Å)
主引用文献Structural Changes in Isometrically Contracting Insect Flight Muscle Trapped Following a Mechanical Perturbation.
Plos One, 7, 2012
5T50
DownloadVisualize
BU of 5t50 by Molmil
LIGAND-FREE LECTIN FROM BAUHINIA FORFICATA
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Lectin
著者Lubkowski, J, Wlodawer, A.
登録日2016-08-30
公開日2016-12-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Structural analysis and unique molecular recognition properties of a Bauhinia forficata lectin that inhibits cancer cell growth.
FEBS J., 284, 2017
5SWZ
DownloadVisualize
BU of 5swz by Molmil
Crystal Structure of NP1-B17 TCR-H2Db-NP complex
分子名称: Beta-2-microglobulin, H-2 class I histocompatibility antigen, D-B alpha chain, ...
著者Gras, S, Del Campo, C.M, Farenc, C, Josephs, T.M, Rossjohn, J.
登録日2016-08-09
公開日2016-10-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Reversed T Cell Receptor Docking on a Major Histocompatibility Class I Complex Limits Involvement in the Immune Response.
Immunity, 45, 2016
7EKR
DownloadVisualize
BU of 7ekr by Molmil
The crystal structure of Orange carotenoid binding protein 1 (OCP1)
分子名称: Orange carotenoid protein, beta,beta-carotene-4,4'-dione
著者Song, J.J, Yoon, J.
登録日2021-04-06
公開日2022-04-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Color-Tuning Mechanism of the Lit Form of Orange Carotenoid Protein.
Mol.Cells, 46, 2023
5T6R
DownloadVisualize
BU of 5t6r by Molmil
Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3 Complex
分子名称: 25S Ribosomal RNA, 5.8S Ribosomal RNA, 5S Ribosomal RNA, ...
著者Malyutin, A.G, Musalgaonkar, S, Patchett, S, Frank, J, Johnson, A.W.
登録日2016-09-01
公開日2017-02-08
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis.
EMBO J., 36, 2017
7E0Z
DownloadVisualize
BU of 7e0z by Molmil
Crystal structure of PKAc-PLN complex
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PLN, ...
著者Qin, J, Yuchi, Z.
登録日2021-01-28
公開日2022-04-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.162 Å)
主引用文献Structures of PKA-phospholamban complexes reveal a mechanism of familial dilated cardiomyopathy.
Elife, 11, 2022
7E12
DownloadVisualize
BU of 7e12 by Molmil
Crystal structure of PKAc-A11E complex
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, THR-ARG-SER-GLU-ILE-ARG-ARG-ALA-SER-THR-ILE-GLU, ...
著者Qin, J, Lin, L, Yuchi, Z.
登録日2021-01-28
公開日2022-04-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.796 Å)
主引用文献Structures of PKA-phospholamban complexes reveal a mechanism of familial dilated cardiomyopathy.
Elife, 11, 2022
7E11
DownloadVisualize
BU of 7e11 by Molmil
Crystal structure of PKAc-PLN R9C complex
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PLN, ...
著者Qin, J, Lin, L, Yuchi, Z.
登録日2021-01-28
公開日2022-04-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.43 Å)
主引用文献Structures of PKA-phospholamban complexes reveal a mechanism of familial dilated cardiomyopathy.
Elife, 11, 2022
3T1A
DownloadVisualize
BU of 3t1a by Molmil
Crystal Structure of HIV-1 Reverse Transcriptase (K103N mutant) in Complex with Inhibitor M05
分子名称: 1-(2,5-dichloro-3-{[5-chloro-1-(2H-pyrazolo[3,4-b]pyridin-3-ylmethyl)-1H-benzotriazol-4-yl]oxy}phenyl)methanamine, Reverse Transcriptase
著者Yan, Y, Reid, J.
登録日2011-07-21
公開日2011-10-26
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Design and synthesis of conformationally constrained inhibitors of non-nucleoside reverse transcriptase.
J.Med.Chem., 54, 2011
2IFD
DownloadVisualize
BU of 2ifd by Molmil
Crystal structure of a remote binding site mutant, R492L, of CDC25B Phosphatase catalytic domain
分子名称: CHLORIDE ION, M-phase inducer phosphatase 2, SULFATE ION
著者Rudolph, J, Buhrman, G.
登録日2006-09-20
公開日2007-02-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Kinetic and structural studies of specific protein-protein interactions in substrate catalysis by Cdc25B phosphatase.
Biochemistry, 46, 2007
5TKP
DownloadVisualize
BU of 5tkp by Molmil
Crystal structure of FBP aldolase from Toxoplasma gondii, equilibrium Schiff base FBP complex
分子名称: 1,6-di-O-phosphono-D-fructose, Fructose-bisphosphate aldolase
著者Heron, P.W, Sygusch, J.
登録日2016-10-07
公開日2017-10-04
最終更新日2020-01-08
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Isomer activation controls stereospecificity of class I fructose-1,6-bisphosphate aldolases.
J. Biol. Chem., 292, 2017
3FY2
DownloadVisualize
BU of 3fy2 by Molmil
Human EphA3 Kinase and Juxtamembrane Region Bound to Substrate KQWDNYEFIW
分子名称: Ephrin type-A receptor 3, peptide substrate
著者Davis, T, Walker, J.R, Mackenzie, F, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
登録日2009-01-21
公開日2009-02-03
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural recognition of an optimized substrate for the ephrin family of receptor tyrosine kinases.
Febs J., 276, 2009
3T3C
DownloadVisualize
BU of 3t3c by Molmil
Structure of HIV PR resistant patient derived mutant (comprising 22 mutations) in complex with DRV
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, BETA-MERCAPTOETHANOL, HIV-1 protease, ...
著者Rezacova, P, Kozisek, M, Konvalinka, J, Saskova, K.G.
登録日2011-07-25
公開日2012-06-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mutations in HIV-1 gag and pol Compensate for the Loss of Viral Fitness Caused by a Highly Mutated Protease.
Antimicrob.Agents Chemother., 56, 2012

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon