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PDB: 42391 件

4UQK
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Electron density map of GluA2em in complex with quisqualate and LY451646
分子名称: (S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID, GLUTAMATE RECEPTOR 2
著者Meyerson, J.R, Kumar, J, Chittori, S, Rao, P, Pierson, J, Bartesaghi, A, Mayer, M.L, Subramaniam, S.
登録日2014-06-24
公開日2014-08-13
最終更新日2017-08-02
実験手法ELECTRON MICROSCOPY (16.4 Å)
主引用文献Structural Mechanism of Glutamate Receptor Activation and Desensitization
Nature, 514, 2014
4URD
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Cryo-EM map of Trigger Factor bound to a translating ribosome
分子名称: TRIGGER FACTOR
著者Deeng, J, Chan, K.Y, van der Sluis, E, Bischoff, L, Berninghausen, O, Han, W, Gumbart, J, Schulten, K, Beatrix, B, Beckmann, R.
登録日2014-06-27
公開日2016-01-13
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (7.7 Å)
主引用文献Dynamic Behavior of Trigger Factor on the Ribosome.
J.Mol.Biol., 428, 2016
6YUR
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Crystal structure of S. aureus FabI inhibited by SKTS1
分子名称: 6-[4-(4-hexyl-2-oxidanyl-phenoxy)phenoxy]pyridin-2-ol, Enoyl-[acyl-carrier-protein] reductase [NADPH], NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Weinrich, J.D, Eltschkner, S, Schiebel, J, Kehrein, J, Le, T.A, Davoodi, S, Merget, B, Tonge, P.J, Engels, B, Sotriffer, C.A, Kisker, C.
登録日2020-04-27
公開日2021-03-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献A Long Residence Time Enoyl-Reductase Inhibitor Explores an Extended Binding Region with Isoenzyme-Dependent Tautomer Adaptation and Differential Substrate-Binding Loop Closure.
Acs Infect Dis., 7, 2021
5HI8
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Structure of T-type Phycobiliprotein Lyase CpeT from Prochlorococcus phage P-HM1
分子名称: ACETATE ION, Antenna protein, MAGNESIUM ION
著者Gasper, R, Schwach, J, Frankenberg-Dinkel, N, Hofmann, E.
登録日2016-01-11
公開日2017-01-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Distinct Features of Cyanophage-encoded T-type Phycobiliprotein Lyase Phi CpeT: THE ROLE OF AUXILIARY METABOLIC GENES.
J. Biol. Chem., 292, 2017
6YUU
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Crystal structure of M. tuberculosis InhA inhibited by SKTS1
分子名称: 6-[4-(4-hexyl-2-oxidanyl-phenoxy)phenoxy]pyridin-2-ol, CHLORIDE ION, Enoyl-[acyl-carrier-protein] reductase [NADH], ...
著者Eltschkner, S, Schiebel, J, Kehrein, J, Le, T.A, Davoodi, S, Merget, B, Weinrich, J.D, Tonge, P.J, Engels, B, Sotriffer, C.A, Kisker, C.
登録日2020-04-27
公開日2021-03-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献A Long Residence Time Enoyl-Reductase Inhibitor Explores an Extended Binding Region with Isoenzyme-Dependent Tautomer Adaptation and Differential Substrate-Binding Loop Closure.
Acs Infect Dis., 7, 2021
4V6M
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Structure of the ribosome-SecYE complex in the membrane environment
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 16S RIBOSOMAL RNA, ...
著者Frauenfeld, J, Gumbart, J, van der Sluis, E.O, Funes, S, Gartmann, M, Beatrix, B, Mielke, T, Berninghausen, O, Becker, T, Schulten, K, Beckmann, R.
登録日2011-02-08
公開日2014-07-09
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (7.1 Å)
主引用文献Cryo-EM structure of the ribosome-SecYE complex in the membrane environment.
Nat.Struct.Mol.Biol., 18, 2011
4UZC
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KSHV LANA (ORF73) C-terminal domain, spiral: hexagonal crystal form
分子名称: ORF 73
著者Hellert, J, Krausze, J, Luhrs, T.
登録日2014-09-05
公開日2015-05-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献The 3D Structure of Kaposi Sarcoma Herpesvirus Lana C-Terminal Domain Bound to DNA.
Proc.Natl.Acad.Sci.USA, 112, 2015
3T0H
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Structure insights into mechanisms of ATP hydrolysis and the activation of human Hsp90
分子名称: Heat shock protein HSP 90-alpha
著者Li, J.
登録日2011-07-20
公開日2012-01-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structure insights into mechanisms of ATP hydrolysis and the activation of human heat-shock protein 90.
Acta Biochim Biophys Sin (Shanghai), 44, 2012
3T0Z
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Hsp90 N-terminal domain bound to ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Heat shock protein HSP 90-alpha, MAGNESIUM ION
著者Li, J.
登録日2011-07-21
公開日2012-01-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.192 Å)
主引用文献Structure insights into mechanisms of ATP hydrolysis and the activation of human heat-shock protein 90.
Acta Biochim Biophys Sin (Shanghai), 44, 2012
2EIS
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X-ray structure of acyl-CoA hydrolase-like protein, TT1379, from Thermus thermophilus HB8
分子名称: COENZYME A, Hypothetical protein TTHB207
著者Kamitori, S, Yoshida, H, Satoh, S, Iino, H, Ebihara, A, Chen, L, Fu, Z.-Q, Chrzas, J, Wang, B.-C, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-13
公開日2008-03-18
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献X-ray structure of acyl-CoA hydrolase-like protein, TT1379, from Thermus thermophilus HB8
To be Published
2DYF
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Solution structure of the first WW domain of FBP11 / HYPA (FBP11 WW1) complexed with a PL (PPLP) motif peptide ligand
分子名称: Huntingtin-interacting protein HYPA/FBP11, PL (PPLP) motif peptide from Myosin tail region-interacting protein MTI1
著者Kato, Y, Miyakawa, T, Kurita, J, Tanokura, M.
登録日2006-09-11
公開日2006-10-24
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Complex structure of fbp11 ww1 and a pl ligand reveals the mechanism of proline-rich ligand recognition by group-II/III ww domains
To be Published
4V96
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The structure of a 1.8 MDa viral genome injection device suggests alternative infection mechanisms
分子名称: BPP, ORF46, ORF48
著者Veesler, D, Spinelli, S, Mahony, J, Lichiere, J, Blangy, S, Bricogne, G, Legrand, P, Ortiz-Lombardia, M, Campanacci, V, van Sinderen, D, Cambillau, C.
登録日2012-02-01
公開日2014-07-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Structure of the phage TP901-1 1.8 MDa baseplate suggests an alternative host adhesion mechanism.
Proc.Natl.Acad.Sci.USA, 109, 2012
4Z5P
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Crystal structure of the LnmA cytochrome P450 hydroxylase from the leinamycin biosynthetic pathway of Streptomyces atroolivaceus S-140 at 1.9 A resolution
分子名称: Cytochrome P450 hydroxylase, PROTOPORPHYRIN IX CONTAINING FE, TRIETHYLENE GLYCOL
著者Ma, M, Lohman, J, Rudolf, J, Miller, M.D, Cao, H, Osipiuk, J, Babnigg, G, Phillips Jr, G.N, Joachimiak, A, Shen, B, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2015-04-02
公開日2015-07-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the LnmA cytochrome P450 hydroxylase from the leinamycin biosynthetic pathway of Streptomyces atroolivaceus S-140
To be Published
4EGX
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Crystal structure of KIF1A CC1-FHA tandem
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Kinesin-like protein KIF1A
著者Yu, J, Huo, L, Yue, Y, Xu, T, Zhang, M, Feng, W.
登録日2012-04-02
公開日2012-10-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献The CC1-FHA Tandem as a Central Hub for Controlling the Dimerization and Activation of Kinesin-3 KIF1A
Structure, 20, 2012
2DXS
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Crystal structure of HCV NS5B RNA polymerase complexed with a tetracyclic inhibitor
分子名称: Genome polyprotein, N-[(13-CYCLOHEXYL-6,7-DIHYDROINDOLO[1,2-D][1,4]BENZOXAZEPIN-10-YL)CARBONYL]-2-METHYL-L-ALANINE
著者Adachi, T, Tsuruha, J, Doi, S, Murase, K, Ikegashira, K, Watanabe, S, Uehara, K, Orita, T, Nomura, A, Kamada, M.
登録日2006-08-30
公開日2006-12-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Discovery of Conformationally Constrained Tetracyclic Compounds as Potent Hepatitis C Virus NS5B RNA Polymerase Inhibitors
J.Med.Chem., 49, 2006
4EQC
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Crystal structure of PAK1 kinase domain in complex with FRAX597 inhibitor
分子名称: 6-[2-chloro-4-(1,3-thiazol-5-yl)phenyl]-8-ethyl-2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}pyrido[2,3-d]pyrimidin-7(8H)-one, CHLORIDE ION, Serine/threonine-protein kinase PAK 1
著者Maksimoska, J, Marmorstein, R.
登録日2012-04-18
公開日2013-08-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献FRAX597, a Small Molecule Inhibitor of the p21-activated Kinases, Inhibits Tumorigenesis of Neurofibromatosis Type 2 (NF2)-associated Schwannomas.
J.Biol.Chem., 288, 2013
4V6S
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Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Agirrezabala, X, Liao, H, Schreiner, E, Fu, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J.
登録日2011-12-09
公開日2014-07-09
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (13.1 Å)
主引用文献Structural characterization of mRNA-tRNA translocation intermediates.
Proc.Natl.Acad.Sci.USA, 109, 2012
4V82
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Crystal structure of cyanobacterial Photosystem II in complex with terbutryn
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Gabdulkhakov, A, Broser, M, Guskov, A, Kern, J, Glockner, C, Muh, F, Saenger, W, Zouni, A.
登録日2010-11-30
公開日2014-07-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis of cyanobacterial photosystem II Inhibition by the herbicide terbutryn
J.Biol.Chem., 286, 2011
2EC8
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Crystal structure of the exctracellular domain of the receptor tyrosine kinase, Kit
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Mast/stem cell growth factor receptor
著者Yuzawa, S, Opatowsky, Y, Zhang, Z, Mandiyan, V, Lax, I, Schlessinger, J.
登録日2007-02-11
公開日2007-08-07
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural Basis for Activation of the Receptor Tyrosine Kinase KIT by Stem Cell Factor
Cell(Cambridge,Mass.), 130, 2007
6Z71
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Structure of the MATE family multidrug resistance transporter Aq_128 from Aquifex aeolicus in the outward-facing state
分子名称: Aq128
著者Zhao, J, Safarian, S, Thielmann, Y, Xie, H, Wang, J, Michel, H.
登録日2020-05-29
公開日2021-12-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献The structure of the Aquifex aeolicus MATE family multidrug resistance transporter and sequence comparisons suggest the existence of a new subfamily.
Proc.Natl.Acad.Sci.USA, 118, 2021
6Z70
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Structure of the MATE family multidrug resistance transporter Aq_128 from Aquifex aeolicus in the outward-facing state
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Aq128
著者Zhao, J, Safarian, S, Thielmann, Y, Xie, H, Wang, J, Michel, H.
登録日2020-05-29
公開日2021-12-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The structure of the Aquifex aeolicus MATE family multidrug resistance transporter and sequence comparisons suggest the existence of a new subfamily.
Proc.Natl.Acad.Sci.USA, 118, 2021
4WCZ
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Crystal structure of a putative enoyl-CoA hydratase/isomerase from Novosphingobium aromaticivorans
分子名称: Enoyl-CoA hydratase/isomerase
著者Tkaczuk, K.L, Cooper, D.R, Chapman, H.C, Niedzialkowska, E, Cymborowski, M.T, Hillerich, B.S, Stead, M, Ahmed, M, Hammonds, J, Bonanno, J, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2014-09-05
公開日2014-12-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Crystal structure of a putative enoyl-CoA hydratase/isomerase from Novosphingobium aromaticivorans
to be published
2EBI
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Arabidopsis GT-1 DNA-binding domain with T133D phosphomimetic mutation
分子名称: DNA binding protein GT-1
著者Nagata, T, Noto, K, Niyada, E, Ikeda, Y, Yamamoto, Y, Uesugi, S, Murata, J, Hiratsuka, K, Katahira, M.
登録日2007-02-08
公開日2008-02-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structures of the trihelix DNA-binding domains of the wild-type and a phosphomimetic mutant of Arabidopsis GT-1: mechanism for an increase in DNA-binding affinity through phosphorylation.
Proteins, 78, 2010
4V6O
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Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Agirrezabala, X, Liao, H, Schreiner, E, Fu, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J.
登録日2011-12-07
公開日2014-07-09
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (14.7 Å)
主引用文献Structural characterization of mRNA-tRNA translocation intermediates.
Proc.Natl.Acad.Sci.USA, 109, 2012
2E26
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Crystal structure of two repeat fragment of reelin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
著者Yasui, N, Nogi, T, Kitao, T, Takagi, J.
登録日2006-11-08
公開日2007-05-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a receptor-binding fragment of reelin and mutational analysis reveal a recognition mechanism similar to endocytic receptors.
Proc.Natl.Acad.Sci.Usa, 104, 2007

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