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PDB: 42550 件

4ADQ
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CRYSTAL STRUCTURE OF THE MOUSE COLONY-STIMULATING FACTOR 1 (MCSF-1) CYTOKINE IN COMPLEX WITH THE VIRAL RECEPTOR BARF1
分子名称: MACROPHAGE COLONY-STIMULATING FACTOR 1, SECRETED PROTEIN BARF1, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Elegheert, J, Bracke, N, Savvides, S.N.
登録日2012-01-02
公開日2012-08-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献Allosteric Competitive Inactivation of Hematopoietic Csf-1 Signaling by the Viral Decoy Receptor Barf1.
Nat.Struct.Mol.Biol., 19, 2012
4AE4
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The UBAP1 subunit of ESCRT-I interacts with ubiquitin via a novel SOUBA domain
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, GLYCEROL, POTASSIUM ION, ...
著者Agromayor, M, Soler, N, Caballe, A, Kueck, T, Freund, S.M, Allen, M.D, Bycroft, M, Perisic, O, Ye, Y, McDonald, B, Scheel, H, Hofmann, K, Neil, S.J.D, Martin-Serrano, J, Williams, R.L.
登録日2012-01-06
公開日2012-03-21
最終更新日2018-02-28
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The UBAP1 subunit of ESCRT-I interacts with ubiquitin via a SOUBA domain.
Structure, 20, 2012
3X03
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Crystal structure of PIP4KIIBETA complex with AMPPNP
分子名称: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Phosphatidylinositol 5-phosphate 4-kinase type-2 beta
著者Takeuchi, K, Lo, Y.H, Sumita, K, Senda, M, Terakawa, J, Dimitoris, A, Locasale, J.W, Sasaki, M, Yoshino, H, Zhang, Y, Kahoud, E.R, Takano, T, Yokota, T, Emerling, B, Asara, J.A, Ishida, T, Shimada, I, Daikoku, T, Cantley, L.C, Senda, T, Sasaki, A.T.
登録日2014-10-09
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis
Mol.Cell, 61, 2016
1THY
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REFINED STRUCTURES OF SUBSTRATE-BOUND AND PHOSPHATE-BOUND THYMIDYLATE SYNTHASE FROM LACTOBACILLUS CASEI
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE
著者Finer-Moore, J, Stroud, R.
登録日1993-04-02
公開日1993-10-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Refined structures of substrate-bound and phosphate-bound thymidylate synthase from Lactobacillus casei.
J.Mol.Biol., 232, 1993
3X01
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Crystal structure of PIP4KIIBETA complex with AMP
分子名称: ADENOSINE MONOPHOSPHATE, Phosphatidylinositol 5-phosphate 4-kinase type-2 beta
著者Takeuchi, K, Lo, Y.H, Sumita, K, Senda, M, Terakawa, J, Dimitoris, A, Locasale, J.W, Sasaki, M, Yoshino, H, Zhang, Y, Kahoud, E.R, Takano, T, Yokota, T, Emerling, B, Asara, J.A, Ishida, T, Shimada, I, Daikoku, T, Cantley, L.C, Senda, T, Sasaki, A.T.
登録日2014-10-09
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis
Mol.Cell, 61, 2016
3K1U
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Beta-xylosidase, family 43 glycosyl hydrolase from Clostridium acetobutylicum
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-xylosidase, ...
著者Osipiuk, J, Wu, R, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2009-09-28
公開日2009-10-06
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献X-ray crystal structure of beta-xylosidase, family 43 glycosyl hydrolase from Clostridium acetobutylicum at 1.55 A resolution
To be Published
1LUL
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DB58, A LEGUME LECTIN FROM DOLICHOS BIFLORUS
分子名称: CALCIUM ION, LECTIN DB58, MANGANESE (II) ION
著者Hamelryck, T.W, Bouckaert, J, Dao-Thi, M.H, Wyns, L, Etzler, M, Loris, R.
登録日1998-06-30
公開日1998-12-30
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Carbohydrate binding, quaternary structure and a novel hydrophobic binding site in two legume lectin oligomers from Dolichos biflorus.
J.Mol.Biol., 286, 1999
3JD2
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Glutamate dehydrogenase in complex with NADH, open conformation
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Glutamate dehydrogenase 1, mitochondrial
著者Borgnia, M.J, Banerjee, S, Merk, A, Matthies, D, Bartesaghi, A, Rao, P, Pierson, J, Earl, L.A, Falconieri, V, Subramaniam, S, Milne, J.L.S.
登録日2016-03-28
公開日2016-04-27
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Using Cryo-EM to Map Small Ligands on Dynamic Metabolic Enzymes: Studies with Glutamate Dehydrogenase.
Mol.Pharmacol., 89, 2016
3K3C
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The N-terminal PAS domain crystal structure of Rv1364c from Mycobacterium tuberculosis at 1.62
分子名称: GLYCEROL, PALMITIC ACID, Protein Rv1364c/MT1410, ...
著者King-Scott, J, Tucker, P.A.
登録日2009-10-02
公開日2010-09-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献The N-terminal PAS domain crystal structure of Rv1364c from Mycobacterium tuberculosis at 1.62
To be Published
3WZE
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KDR in complex with ligand sorafenib
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-{4-[({[4-CHLORO-3-(TRIFLUOROMETHYL)PHENYL]AMINO}CARBONYL)AMINO]PHENOXY}-N-METHYLPYRIDINE-2-CARBOXAMIDE, ACETATE ION, ...
著者Okamoto, K, Ikemori_Kawada, M, Inoue, A, Matsui, J.
登録日2014-09-24
公開日2015-05-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Distinct binding mode of multikinase inhibitor lenvatinib revealed by biochemical characterization.
ACS MED.CHEM.LETT., 6, 2015
1MBC
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X-RAY STRUCTURE AND REFINEMENT OF CARBON-MONOXY (FE II)-MYOGLOBIN AT 1.5 ANGSTROMS RESOLUTION
分子名称: CARBON MONOXIDE, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Kuriyan, J, Petsko, G.A.
登録日1988-09-15
公開日1989-01-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献X-ray structure and refinement of carbon-monoxy (Fe II)-myoglobin at 1.5 A resolution.
J.Mol.Biol., 192, 1986
3JRR
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Crystal structure of the ligand binding suppressor domain of type 3 inositol 1,4,5-trisphosphate receptor
分子名称: Inositol 1,4,5-trisphosphate receptor type 3
著者Chan, J, Ishiyama, N, Ikura, M.
登録日2009-09-08
公開日2010-09-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A 1.9 angstrom crystal structure of the suppressor domain of type 3 inositol 1,4,5-trisphosphate receptor
To be Published
3X09
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Crystal structure of PIP4KIIBETA F205L complex with AMP
分子名称: ADENOSINE MONOPHOSPHATE, Phosphatidylinositol 5-phosphate 4-kinase type-2 beta
著者Takeuchi, K, Lo, Y.H, Sumita, K, Senda, M, Terakawa, J, Dimitoris, A, Locasale, J.W, Sasaki, M, Yoshino, H, Zhang, Y, Kahoud, E.R, Takano, T, Yokota, T, Emerling, B, Asara, J.A, Ishida, T, Shimada, I, Daikoku, T, Cantley, L.C, Senda, T, Sasaki, A.T.
登録日2014-10-09
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis
Mol.Cell, 61, 2016
3K55
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Structure of beta hairpin deletion mutant of beta toxin from Staphylococcus aureus
分子名称: Beta-hemolysin, CHLORIDE ION, SODIUM ION
著者Kruse, A.C, Huseby, M, Shi, K, Digre, J, Ohlendorf, D.H, Earhart, C.A.
登録日2009-10-06
公開日2011-01-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Structure of a mutant beta toxin from Staphylococcus aureus reveals domain swapping and conformational flexibility
Acta Crystallogr.,Sect.F, 67, 2011
3K7J
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Crystal structure of the D100E mutant of the Indian Hedgehog N-terminal signalling domain
分子名称: CARBONATE ION, Indian hedgehog protein, SULFATE ION, ...
著者He, Y.-X, Kang, Y, Zhang, W.J, Yu, J, Ma, G, Zhou, C.-Z.
登録日2009-10-13
公開日2011-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the D100E mutant of the Indian Hedgehog N-terminal signalling domain
To be Published
3K1K
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Green fluorescent protein bound to enhancer nanobody
分子名称: Enhancer, Green Fluorescent Protein
著者Kirchhofer, A, Helma, J, Schmidthals, K, Frauer, C, Cui, S, Karcher, A, Pellis, M, Muyldermans, S, Delucci, C.C, Cardoso, M.C, Leonhardt, H, Hopfner, K.-P, Rothbauer, U.
登録日2009-09-28
公開日2009-12-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Modulation of protein properties in living cells using nanobodies
Nat.Struct.Mol.Biol., 17, 2010
1TUM
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MUTT PYROPHOSPHOHYDROLASE-METAL-NUCLEOTIDE-METAL COMPLEX, NMR, 16 STRUCTURES
分子名称: COBALT TETRAAMMINE ION, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MAGNESIUM ION, ...
著者Lin, J, Abeygunawardana, C, Frick, D.N, Bessman, M.J, Mildvan, A.S.
登録日1996-12-05
公開日1997-05-15
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the quaternary MutT-M2+-AMPCPP-M2+ complex and mechanism of its pyrophosphohydrolase action.
Biochemistry, 36, 1997
3WYI
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Structure of S. aureus undecaprenyl diphosphate synthase
分子名称: Isoprenyl transferase, MAGNESIUM ION
著者Gao, J, Ko, T.P, Huang, C.H, Oldfield, E, Guo, R.T.
登録日2014-08-29
公開日2015-02-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Antibacterial drug leads: DNA and enzyme multitargeting.
J.Med.Chem., 58, 2015
3WYR
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Crystal structure of Killer cell immunoglobulin-like receptor 2DL4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Killer cell immunoglobulin-like receptor 2DL4
著者Vivian, J.P, Moradi, S, Rossjohn, J.
登録日2014-09-07
公開日2015-03-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The structure of the atypical killer cell immunoglobulin-like receptor, KIR2DL4.
J.Biol.Chem., 290, 2015
3K3S
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Crystal structure of altronate hydrolase (fragment 1-84) from Shigella Flexneri.
分子名称: ACETATE ION, Altronate hydrolase, CHLORIDE ION, ...
著者Hou, J, Chruszcz, M, Xu, X, Le, B, Zimmerman, M.D, Savchenko, A, Edwards, A.M, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2009-10-04
公開日2009-10-27
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of altronate hydrolase (fragment 1-84) from Shigella Flexneri.
To be Published
3X04
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Crystal structure of PIP4KIIBETA complex with GMPPNP
分子名称: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Phosphatidylinositol 5-phosphate 4-kinase type-2 beta
著者Takeuchi, K, Lo, Y.H, Sumita, K, Senda, M, Terakawa, J, Dimitoris, A, Locasale, J.W, Sasaki, M, Yoshino, H, Zhang, Y, Kahoud, E.R, Takano, T, Yokota, T, Emerling, B, Asara, J.A, Ishida, T, Shimada, I, Daikoku, T, Cantley, L.C, Senda, T, Sasaki, A.T.
登録日2014-10-09
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis
Mol.Cell, 61, 2016
3ZFV
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Crystal structure of an archaeal CRISPR-associated Cas6 nuclease
分子名称: CRISPR-ASSOCIATED ENDORIBONUCLEASE CAS6 1, GLYCEROL
著者Reeks, J, Liu, H, White, M.F, Naismith, J.H.
登録日2012-12-12
公開日2013-04-03
最終更新日2013-05-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of a Dimeric Crenarchaeal Cas6 Enzyme with an Atypical Active Site for Crispr RNA Processing
Biochem.J., 452, 2013
3K9R
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X-ray structure of the Rhodanese-like domain of the Alr3790 protein from Anabaena sp. Northeast Structural Genomics Consortium Target NsR437c.
分子名称: Alr3790 protein
著者Vorobiev, S, Chen, Y, Seetharaman, J, Maglaqui, M, Ciccosanti, C, Mao, L, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2009-10-16
公開日2009-10-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献X-ray structure of the Rhodanese-like domain of the Alr3790 protein from Anabaena sp.
To be Published
3ZJI
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Tyr(61)B10Ala mutation of M.acetivorans protoglobin in complex with cyanide
分子名称: CYANIDE ION, GLYCEROL, PROTOGLOBIN, ...
著者Pesce, A, Tilleman, L, Donne, J, Aste, E, Ascenzi, P, Ciaccio, C, Coletta, M, Moens, L, Viappiani, C, Dewilde, S, Bolognesi, M, Nardini, M.
登録日2013-01-18
公開日2013-06-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure and Haem-Distal Site Plasticity in Methanosarcina Acetivorans Protoglobin.
Plos One, 8, 2013
4LQU
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1.60A resolution crystal structure of a superfolder green fluorescent protein (W57G) mutant
分子名称: Green fluorescent protein
著者Lovell, S, Xia, Y, Vo, B, Battaile, K.P, Egan, C, Karanicolas, J.
登録日2013-07-19
公開日2013-12-18
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The designability of protein switches by chemical rescue of structure: mechanisms of inactivation and reactivation.
J.Am.Chem.Soc., 135, 2013

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