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PDB: 42550 件

2PID
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Crystal structure of human mitochondrial tyrosyl-tRNA synthetase in complex with an adenylate analog
分子名称: 5'-O-[N-(L-TYROSYL)SULFAMOYL]ADENOSINE, Tyrosyl-tRNA synthetase
著者Bonnefond, L, Frugier, M, Touze, E, Lorber, B, Florentz, C, Giege, R, Sauter, C, Rudinger-Thirion, J.
登録日2007-04-13
公開日2007-10-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of Human Mitochondrial Tyrosyl-tRNA Synthetase Reveals Common and Idiosyncratic Features.
Structure, 15, 2007
6K4M
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Cryo-EM structure of Holo-bacterioferritin form-II from Streptomyces coelicolor
分子名称: Bacterioferritin, FE (II) ION, PROTOPORPHYRIN IX CONTAINING FE
著者Jobichen, C, Sivaraman, J.
登録日2019-05-24
公開日2021-02-03
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Cryo-EM structure of Bacterioferritin from Streptomyces coelicolor
To Be Published
6K60
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Structural and functional basis for HLA-G isoform recognition of immune checkpoint receptor LILRBs
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, alpha chain G, ...
著者Kuroki, K, Matsubara, H, Kanda, R, Miyashita, N, Shiroishi, M, Fukunaga, Y, Kamishikiryo, J, Fukunaga, A, Hirose, K, Sugita, Y, Kita, S, Ose, T, Maenaka, K.
登録日2019-05-31
公開日2019-11-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.149 Å)
主引用文献Structural and Functional Basis for LILRB Immune Checkpoint Receptor Recognition of HLA-G Isoforms.
J Immunol., 203, 2019
6K40
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Crystal structure of alkyl hydroperoxide reductase from D. radiodurans R1
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alkyl hydroperoxide reductase AhpD, DI(HYDROXYETHYL)ETHER, ...
著者Kim, M.-K, Zhang, J, Zhao, L.
登録日2019-05-22
公開日2020-05-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Crystal structure of the AhpD-like protein DR1765 from Deinococcus radiodurans R1.
Biochem.Biophys.Res.Commun., 529, 2020
2VVI
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IrisFP fluorescent protein in its green form, trans conformation
分子名称: Green to red photoconvertible GFP-like protein EosFP, SULFATE ION, SULFITE ION
著者Adam, V, Lelimousin, M, Boehme, S, Desfonds, G, Nienhaus, K, Field, M.J, Wiedenmann, J, McSweeney, S, Nienhaus, G.U, Bourgeois, D.
登録日2008-06-09
公開日2008-11-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Characterization of Irisfp, an Optical Highlighter Undergoing Multiple Photo-Induced Transformations.
Proc.Natl.Acad.Sci.USA, 105, 2008
5OJF
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Crystal Structure of KLC2-TPR domain (fragment [A1-B6]
分子名称: Kinesin light chain 2
著者Nguyen, T.Q, Chenon, M, Vilela, F, Velours, C, Andreani, J, Fernandez-Varela, P, Llinas, P, Menetrey, J.
登録日2017-07-21
公開日2017-10-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural plasticity of the N-terminal capping helix of the TPR domain of kinesin light chain.
PLoS ONE, 12, 2017
6K4X
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Crystal structure of SMB-1 metallo-beta-lactamase in a complex with ASB
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-azanyl-2-sulfanyl-benzoic acid, Metallo-beta-lactamase, ...
著者Wachino, J.
登録日2019-05-27
公開日2019-08-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献4-Amino-2-Sulfanylbenzoic Acid as a Potent Subclass B3 Metallo-beta-Lactamase-Specific Inhibitor Applicable for Distinguishing Metallo-beta-Lactamase Subclasses.
Antimicrob.Agents Chemother., 63, 2019
2VYC
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Crystal Structure of Acid Induced Arginine Decarboxylase from E. coli
分子名称: BIODEGRADATIVE ARGININE DECARBOXYLASE, PYRIDOXAL-5'-PHOSPHATE
著者Andrell, J, Hicks, M.G, Palmer, T, Carpenter, E.P, Iwata, S, Maher, M.J.
登録日2008-07-22
公開日2009-03-31
最終更新日2015-12-02
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of the Acid Induced Arginine Decarboxylase from Escherichia Coli: Reversible Decamer Assembly Controls Enzyme Activity.
Biochemistry, 48, 2009
6K57
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Crystal structure of dCas9 in complex with sgRNA and DNA (CGA PAM)
分子名称: CRISPR-associated endonuclease Cas9, non-target DNA, sgRNA, ...
著者Chen, W, Zhang, H, Zhang, Y, Wang, Y, Gan, J, Ji, Q.
登録日2019-05-28
公開日2019-09-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Molecular basis for the PAM expansion and fidelity enhancement of an evolved Cas9 nuclease.
Plos Biol., 17, 2019
2VVU
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Aminopyrrolidine Factor Xa inhibitor
分子名称: 5-chloro-N-[(3R)-1-(2-{[2-fluoro-4-(2-oxopyridin-1(2H)-yl)phenyl]amino}-2-oxoethyl)pyrrolidin-3-yl]thiophene-2-carboxamide, ACTIVATED FACTOR XA HEAVY CHAIN, CALCIUM ION, ...
著者Groebke-Zbinden, K, Banner, D.W, Benz, J.M, Blasco, F, Decoret, G, Himber, J, Kuhn, B, Panday, N, Ricklin, F, Risch, P, Schlatter, D, Stahl, M, Unger, R, Haap, W.
登録日2008-06-11
公開日2009-07-07
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Design of Novel Aminopyrrolidine Factor Xa Inhibitors from a Screening Hit.
Eur.J.Med.Chem., 44, 2009
2W75
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Structures of P. aeruginosa FpvA bound to heterologous pyoverdines: Apo-FpvA
分子名称: 3,6,9,12,15-PENTAOXATRICOSAN-1-OL, FERRIPYOVERDINE RECEPTOR, PHOSPHATE ION
著者Greenwald, J, Nader, M, Celia, H, Gruffaz, C, Meyer, J.-M, Schalk, I.J, Pattus, F.
登録日2008-12-20
公開日2009-05-12
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Fpva Bound to Non-Cognate Pyoverdines: Molecular Basis of Siderophore Recognition by an Iron Transporter.
Mol.Microbiol., 72, 2009
2WB6
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Crystal structure of AFV1-102, a protein from the Acidianus Filamentous Virus 1
分子名称: AFV1-102, CHLORIDE ION
著者Keller, J, Leulliot, N, Collinet, B, Campanacci, V, Cambillau, C, Pranghisvilli, D, van Tilbeurgh, H.
登録日2009-02-22
公開日2009-03-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal Structure of Afv1-102, a Protein from the Acidianus Filamentous Virus 1.
Protein Sci., 18, 2009
7FH0
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Crystallographic structure of two neutralizing nanobodies in complex with SARS-CoV-2 spike receptor-binding Domain (RBD)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
著者Zheng, P, Jin, J.
登録日2021-07-28
公開日2022-08-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Hetero-bivalent nanobodies provide broad-spectrum protection against SARS-CoV-2 variants of concern including Omicron.
Cell Res., 32, 2022
2WV7
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Intracellular subtilisin precursor from B. clausii
分子名称: INTRACELLULAR SUBTILISIN PROTEASE, SODIUM ION
著者Vevodova, J, Gamble, M, Ariza, A, Dodson, E, Jones, D.D, Wilson, K.S.
登録日2009-10-15
公開日2010-09-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal Structure of an Intracellular Subtilisin Reveals Novel Structural Features Unique to This Subtilisin Family.
Structure, 18, 2010
2WTR
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Full length Arrestin2
分子名称: BARIUM ION, BETA-ARRESTIN-1
著者Zhou, H.G, Standfuss, J, Watson, K.A, Krasel, C.
登録日2009-09-21
公開日2009-09-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A New Dimeric Crystal Form for Arrestin2
To be Published
2WWH
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BU of 2wwh by Molmil
Plasmodium falciparum thymidylate kinase in complex with AP5dT
分子名称: P1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE, SODIUM ION, THYMIDILATE KINASE, ...
著者Whittingham, J.L, Carrero-Lerida, J, Brannigan, J.A, Ruiz-Perez, L.M, Silva, A.P.G, Fogg, M.J, Wilkinson, A.J, Gilbert, I.H, Wilson, K.S, Gonzalez-Pacanowska, D.
登録日2009-10-23
公開日2010-04-21
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural Basis for the Efficient Phosphorylation of Aztmp and Dgmp by Plasmodium Falciparum Type I Thymidylate Kinase.
Biochem.J., 428, 2010
2WV4
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Crystal structure of foot-and-mouth disease virus 3C protease in complex with a decameric peptide corresponding to the VP1-2A cleavage junction
分子名称: FOOT AND MOUTH DISEASE VIRUS (SEROTYPE A) VARIANT VP1 CAPSID PROTEIN, PICORNAIN 3C
著者Zunszain, P.A, Knox, S.R, Sweeney, T.R, Yang, J, Roque-Rosell, N, Belsham, G.J, Leatherbarrow, R.J, Curry, S.
登録日2009-10-13
公開日2009-10-27
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Insights Into Cleavage Specificity from the Crystal Structure of Foot-and-Mouth Disease Virus 3C Protease Complexed with a Peptide Substrate.
J.Mol.Biol., 395, 2010
4EKX
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Crystal Structure of YLDV 14L IL-18 Binding Protein in Complex with Human IL-18
分子名称: 14L protein, Interleukin-18
著者Krumm, B.E, Xiang, Y, Deng, J.
登録日2012-04-10
公開日2012-09-26
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A unique bivalent binding and inhibition mechanism by the yatapoxvirus interleukin 18 binding protein.
Plos Pathog., 8, 2012
6KI8
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Pyrophosphatase mutant K149R from Acinetobacter baumannii
分子名称: DIPHOSPHATE, Inorganic pyrophosphatase, MAGNESIUM ION
著者Su, J.
登録日2019-07-17
公開日2019-10-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Crystal Structures of Pyrophosphatase from Acinetobacter baumannii: Snapshots of Pyrophosphate Binding and Identification of a Phosphorylated Enzyme Intermediate.
Int J Mol Sci, 20, 2019
6KF3
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Cryo-EM structure of Thermococcus kodakarensis RNA polymerase
分子名称: DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit A'', DNA-directed RNA polymerase subunit D, ...
著者Jun, S.-H, Hyun, J, Jeong, H, Cha, J.S, Kim, H, Bartlett, M.S, Cho, H.-S, Murakami, K.S.
登録日2019-07-06
公開日2020-07-01
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Direct binding of TFE alpha opens DNA binding cleft of RNA polymerase.
Nat Commun, 11, 2020
6KIZ
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Cryo-EM structure of human MLL1-NCP complex, binding mode2
分子名称: DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
著者Huang, J, Xue, H, Yao, T.
登録日2019-07-20
公開日2019-09-11
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structural basis of nucleosome recognition and modification by MLL methyltransferases.
Nature, 573, 2019
2Q06
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Crystal structure of Influenza A Virus H5N1 Nucleoprotein
分子名称: Nucleoprotein
著者Ng, A.K.L, Zhang, H, Tan, K, Wang, J, Shaw, P.C.
登録日2007-05-21
公開日2008-05-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure of the influenza virus A H5N1 nucleoprotein: implications for RNA binding, oligomerization, and vaccine design.
Faseb J., 22, 2008
2X7G
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Structure of human serine-arginine-rich protein-specific kinase 2 (SRPK2) bound to purvalanol B
分子名称: 1,2-ETHANEDIOL, ACETATE ION, PURVALANOL B, ...
著者Pike, A.C.W, Savitsky, P, Fedorov, O, Krojer, T, Ugochukwu, E, von Delft, F, Gileadi, O, Edwards, A, Arrowsmith, C.H, Weigelt, J, Bountra, C, Knapp, S.
登録日2010-02-26
公開日2010-04-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of Human Serine-Arginine-Rich Protein- Specific Kinase 2 (Srpk2) Bound to Purvalanol B
To be Published
6KN1
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P20/P12 of caspase-11 mutant C254A
分子名称: Caspase-4
著者Ding, J, Sun, Q.
登録日2019-08-02
公開日2020-03-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Mechanism for GSDMD Targeting by Autoprocessed Caspases in Pyroptosis.
Cell, 180, 2020
6KIU
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Cryo-EM structure of human MLL1-ubNCP complex (3.2 angstrom)
分子名称: DNA (145-MER), GLUTAMINE, Histone H2A, ...
著者Huang, J, Xue, H, Yao, T.
登録日2019-07-20
公開日2019-09-11
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis of nucleosome recognition and modification by MLL methyltransferases.
Nature, 573, 2019

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