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PDB: 42550 件

5MLC
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Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions
分子名称: 23S ribosomal RNA, chloroplastic, 4.8S ribosomal RNA, ...
著者Graf, M, Arenz, S, Huter, P, Doenhoefer, A, Novacek, J, Wilson, D.N.
登録日2016-12-06
公開日2016-12-28
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions.
Nucleic Acids Res., 45, 2017
6H7E
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GEF regulatory domain
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, SULFATE ION, cDNA FLJ56134, ...
著者Ferrandez, Y, Cherfils, J, Peurois, F.
登録日2018-07-31
公開日2020-02-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Membranes prime the RapGEF EPAC1 to transduce cAMP signaling.
Nat Commun, 14, 2023
5MXE
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Photorhabdus asymbiotica lectin (PHL) in free form
分子名称: CHLORIDE ION, Photorhabdus asymbiotica lectin PHL, SODIUM ION
著者Jancarikova, G, Houser, J, Demo, G, Wimmerova, M.
登録日2017-01-23
公開日2017-08-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Characterization of novel bangle lectin from Photorhabdus asymbiotica with dual sugar-binding specificity and its effect on host immunity.
PLoS Pathog., 13, 2017
2VUG
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The structure of an archaeal homodimeric RNA ligase
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, PAB1020, ...
著者Brooks, M.A, Meslet-Cladiere, L, Graille, M, Kuhn, J, Blondeau, K, Myllykallio, H, van Tilbeurgh, H.
登録日2008-05-26
公開日2008-06-03
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The structure of an archaeal homodimeric ligase which has RNA circularization activity.
Protein Sci., 17, 2008
2NZ8
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N-terminal DHPH cassette of Trio in complex with nucleotide-free Rac1
分子名称: ras-related C3 botulinum toxin substrate 1 isoform Rac1, triple functional domain protein
著者Chhatriwala, M.K, Betts, L, Worthylake, D.K, Sondek, J.
登録日2006-11-22
公開日2007-04-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The DH and PH Domains of Trio Coordinately Engage Rho GTPases for their Efficient Activation
J.Mol.Biol., 368, 2007
5M60
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Chaetomium thermophilum beta-1-3-glucanase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-1,3-glucanase, SODIUM ION, ...
著者Papageorgiou, A.C, Chen, J, Li, D.
登録日2016-10-23
公開日2017-05-17
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure and biological implications of a glycoside hydrolase family 55 beta-1,3-glucanase from Chaetomium thermophilum.
Biochim. Biophys. Acta, 1865, 2017
5M7C
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Blood group synthase AAGlyB in complex with UDP and cryoprotected with PEG 3350
分子名称: DI(HYDROXYETHYL)ETHER, Histo-blood group ABO system transferase, MANGANESE (II) ION, ...
著者Rocha, J, Royant, A.
登録日2016-10-27
公開日2017-11-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Blood group synthase AAGlyB in complex with UDP and cryoprotected with PEG 3350
To be published
5MJJ
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Single-shot pink beam serial crystallography: Lysozyme
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Meents, A, Oberthuer, D, Lieske, J, Srajer, V.
登録日2016-12-01
公開日2017-12-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.750092 Å)
主引用文献Single-shot pink beam serial crystallography: Lysozyme
To Be Published
2O3V
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Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site complexed with paromamine derivative NB33
分子名称: (2S,3R,4R,5S,6R)-3-AMINO-4-({[(2S,3R,4R,5S,6R)-3-AMINO-2-{[(1R,2R,3S,4R,6S)-4,6-DIAMINO-2,3-DIHYDROXYCYCLOHEXYL]OXY}-5-HYDROXY-6-(HYDROXYMETHYL)TETRAHYDRO-2H-PYRAN-4-YL]OXY}METHOXY)-6-(HYDROXYMETHYL)TETRAHYDRO-2H-PYRAN-2,5-DIOL, RNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3')
著者Kondo, J, Hainrichson, M, Nudelman, I, Shallom-Shezifi, D, Baasov, T, Westhof, E.
登録日2006-12-02
公開日2007-11-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Differential Selectivity of Natural and Synthetic Aminoglycosides towards the Eukaryotic and Prokaryotic Decoding A Sites.
Chembiochem, 8, 2007
6JH5
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Structure of Marine bacterial laminarinase
分子名称: CALCIUM ION, LamCAT
著者Yang, J, Xu, Y, Miyakawa, T, Ru, L, Tanokura, M, Long, L.
登録日2019-02-17
公開日2019-04-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Molecular Basis for Substrate Recognition and Catalysis by a Marine Bacterial Laminarinase.
Appl.Environ.Microbiol., 86, 2020
2O2H
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Crystal structure of haloalkane dehalogenase Rv2579 from Mycobacterium tuberculosis complexed with 1,2-dichloroethane
分子名称: 1,2-DICHLOROETHANE, ACETATE ION, CHLORIDE ION, ...
著者Mazumdar, P.A, Hulecki, J, Cherney, M.M, Garen, C.R, James, M.N.G, TB Structural Genomics Consortium (TBSGC)
登録日2006-11-29
公開日2007-11-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of haloalkane dehalogenase Rv2579 from Mycobacterium tuberculosis complexed with 1,2-dichloroethane
TO BE PUBLISHED
6JIB
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Human MTHFD2 in complex with DS44960156
分子名称: 4-(5-oxo-1,5-dihydro-2H-[1]benzopyrano[3,4-c]pyridine-3(4H)-carbonyl)benzoic acid, Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial, ...
著者Suzuki, M, Matsui, Y, Kawai, J.
登録日2019-02-20
公開日2019-06-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure-Based Design and Synthesis of an Isozyme-Selective MTHFD2 Inhibitor with a Tricyclic Coumarin Scaffold.
Acs Med.Chem.Lett., 10, 2019
5MN6
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S. aureus FtsZ 12-316 F138A GDP Closed form (3FCm)
分子名称: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
著者Wagstaff, J.M, Tsim, M, Kureisaite-Ciziene, D, Lowe, J.
登録日2016-12-12
公開日2016-12-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献A Polymerization-Associated Structural Switch in FtsZ That Enables Treadmilling of Model Filaments.
MBio, 8, 2017
2WR7
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the structure of influenza H2 human singapore hemagglutinin with human receptor
分子名称: HEMAGGLUTININ, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose
著者Liu, J, Stevens, D.J, Haire, L.F, Walker, P.A, Coombs, P.J, Russell, R.J, Gamblin, S.J, Skehel, J.J.
登録日2009-08-30
公開日2009-09-29
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献From the Cover: Structures of Receptor Complexes Formed by Hemagglutinins from the Asian Influenza Pandemic of 1957.
Proc.Natl.Acad.Sci.USA, 106, 2009
5MNC
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Cationic trypsin in complex with aniline (deuterated sample at 100 K)
分子名称: ANILINE, CALCIUM ION, Cationic trypsin, ...
著者Schiebel, J, Heine, A, Klebe, G.
登録日2016-12-13
公開日2017-05-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (0.916 Å)
主引用文献Charges Shift Protonation: Neutron Diffraction Reveals that Aniline and 2-Aminopyridine Become Protonated Upon Binding to Trypsin.
Angew. Chem. Int. Ed. Engl., 56, 2017
5MNK
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Cationic trypsin in complex with benzylamine (deuterated sample at 100 K)
分子名称: BENZYLAMINE, CALCIUM ION, Cationic trypsin, ...
著者Schiebel, J, Heine, A, Klebe, G.
登録日2016-12-13
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (0.799 Å)
主引用文献Cationic trypsin in complex with benzylamine (deuterated sample at 100 K)
to be published
2WMR
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Crystal structure of checkpoint kinase 1 (Chk1) in complex with inhibitors
分子名称: 5,6,7,8-TETRAHYDRO[1]BENZOTHIENO[2,3-D]PYRIMIDIN-4(3H)-ONE, SERINE/THREONINE-PROTEIN KINASE CHK1
著者Matthews, T.P, Klair, S, Burns, S, Boxall, K, Cherry, M, Fisher, M, Westwood, I.M, Walton, M.I, McHardy, T, Cheung, K.-M.J, Van Montfort, R, Williams, D, Aherne, G.W, Garrett, M.D, Reader, J, Collins, I.
登録日2009-07-03
公開日2009-07-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Identification of Inhibitors of Checkpoint Kinase 1 Through Template Screening.
J.Med.Chem., 52, 2009
2WJ8
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Respiratory Syncitial Virus RiboNucleoProtein
分子名称: BORATE ION, NUCLEOPROTEIN, RNA (5'-R(*CP*CP*CP*CP*CP*C)-3')
著者Tawar, R.G, Duquerroy, S, Vonrhein, C, Varela, P.F, Damier-Piolle, L, Castagne, N, MacLellan, K, Bedouelle, H, Bricogne, G, Bhella, D, Eleouet, J, Rey, F.A.
登録日2009-05-25
公開日2009-12-08
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.29 Å)
主引用文献Crystal Structure of a Nucleocapsid-Like Nucleoprotein-RNA Complex of Respiratory Syncytial Virus
Science, 326, 2009
5MU7
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Crystal Structure of the beta/delta-COPI Core Complex
分子名称: Coatomer subunit beta, Coatomer subunit delta-like protein
著者Kopp, J, Aderhold, P, Wieland, F, Sinning, I.
登録日2017-01-12
公開日2017-06-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献9 angstrom structure of the COPI coat reveals that the Arf1 GTPase occupies two contrasting molecular environments.
Elife, 6, 2017
5QHW
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PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of human PARP14 Macrodomain 3 in complex with FMOPL000347a
分子名称: 2-methyl-~{N}-(2-methylpropyl)imidazo[1,2-a]pyridine-3-carboxamide, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
著者Schuller, M, Talon, R, Krojer, T, Brandao-Neto, J, Douangamath, A, Zhang, R, von Delft, F, Schuler, H, Kessler, B, Knapp, S, Bountra, C, Arrowsmith, C.H, Edwards, A, Elkins, J.
登録日2018-05-21
公開日2019-04-10
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献PanDDA analysis group deposition of models with modelled events (e.g. bound ligands)
To Be Published
5MPO
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Crystal structure of human molybdopterin synthase complex
分子名称: Molybdopterin synthase catalytic subunit, Molybdopterin synthase sulfur carrier subunit
著者Kopec, J, Bailey, H, Fitzpatrick, F, Strain-Damerell, C, Oberholzer, A.E, Williams, E, Burgess-Brown, N, von Delft, F, Arrowsmith, C, Edwards, A, Bountra, C, Yue, W.W.
登録日2016-12-16
公開日2016-12-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Crystal structure of human molybdopterin synthase complex
To Be Published
2V54
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Crystal structure of vaccinia virus thymidylate kinase bound to TDP
分子名称: MAGNESIUM ION, PYROPHOSPHATE 2-, THYMIDINE-5'-DIPHOSPHATE, ...
著者Caillat, C, Topalis, D, Agrofoglio, L.A, Pochet, S, Balzarini, J, Deville-Bonne, D, Meyer, P.
登録日2008-10-01
公開日2008-10-21
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of Poxvirus Thymidylate Kinase: An Unexpected Dimerization Has Implications for Antiviral Therapy
Proc.Natl.Acad.Sci.USA, 105, 2008
2V8C
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Mouse Profilin IIa in complex with the proline-rich domain of VASP
分子名称: GLYCEROL, ISOPROPYL ALCOHOL, PROFILIN-2, ...
著者Kursula, P, Downer, J, Witke, W, Wilmanns, M.
登録日2007-08-06
公開日2007-12-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献High-Resolution Structural Analysis of Mammalian Profilin 2A Complex Formation with Two Physiological Ligands: The Formin Homology 1 Domain of Mdia1 and the Proline-Rich Domain of Vasp.
J.Mol.Biol., 375, 2008
5MWX
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Galectin-1 in Complex with Ligand JB60
分子名称: BETA-MERCAPTOETHANOL, Galectin-1, SULFATE ION, ...
著者Grimm, C, Bechold, J.
登録日2017-01-20
公開日2018-02-28
最終更新日2019-10-16
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Galectin-1 in Complex with Ligand JB60
To Be Published
2VBT
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Riboflavin kinase Mj0056 from Methanocaldococcus jannaschii in complex with CDP and PO4
分子名称: CYTIDINE-5'-DIPHOSPHATE, PHOSPHATE ION, RIBOFLAVIN KINASE, ...
著者Hartmann, M.D, Ammelburg, M, Djuranovic, S, Martin, J, Lupas, A.N, Zeth, K.
登録日2007-09-16
公開日2007-11-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A Ctp-Dependent Archaeal Riboflavin Kinase Forms a Bridge in the Evolution of Cradle-Loop Barrels.
Structure, 15, 2007

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