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PDB: 42550 件

5LEY
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Human 20S proteasome complex with Oprozomib at 1.9 Angstrom
分子名称: CHLORIDE ION, MAGNESIUM ION, PENTAETHYLENE GLYCOL, ...
著者Schrader, J, Henneberg, F, Mata, R, Tittmann, K, Schneider, T.R, Stark, H, Bourenkov, G, Chari, A.
登録日2016-06-30
公開日2016-08-17
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The inhibition mechanism of human 20S proteasomes enables next-generation inhibitor design.
Science, 353, 2016
2VXO
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BU of 2vxo by Molmil
Human GMP synthetase in complex with XMP
分子名称: GMP SYNTHASE [GLUTAMINE-HYDROLYZING], SULFATE ION, XANTHOSINE-5'-MONOPHOSPHATE
著者Welin, M, Lehtio, L, Andersson, J, Arrowsmith, C.H, Berglund, H, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Karlberg, T, Kotenyova, T, Moche, M, Nilsson, M.E, Nyman, T, Olesen, K, Persson, C, Sagemark, J, Schueler, H, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Wisniewska, M, Wikstrom, M, Nordlund, P.
登録日2008-07-08
公開日2008-08-12
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Substrate Specificity and Oligomerization of Human Gmp Synthetase
J.Mol.Biol., 425, 2013
2VUT
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BU of 2vut by Molmil
Crystal structure of NAD-bound NmrA-AreA zinc finger complex
分子名称: CHLORIDE ION, GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Kotaka, M, Johnson, C, Lamb, H.K, Hawkins, A.R, Ren, J, Stammers, D.K.
登録日2008-05-30
公開日2008-07-29
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Analysis of the Recognition of the Negative Regulator Nmra and DNA by the Zinc Finger from the Gata-Type Transcription Factor Area.
J.Mol.Biol., 381, 2008
6H96
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AlbA-albicidin complex, albicidin resistance protein
分子名称: 4-[[4-[[4-[(3~{S})-5-azanyl-3-[[4-[[(~{E})-3-(4-hydroxyphenyl)-2-methyl-prop-2-enoyl]amino]phenyl]carbonylamino]-2-oxidanylidene-3~{H}-pyrrol-1-yl]phenyl]carbonylamino]-3-methoxy-2-oxidanyl-phenyl]carbonylamino]-3-methoxy-2-oxidanyl-benzoic acid, Albicidin resistance protein, SULFATE ION
著者Koehnke, J, Sikandar, A.
登録日2018-08-03
公開日2018-11-21
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Adaptation of a Bacterial Multidrug Resistance System Revealed by the Structure and Function of AlbA.
J.Am.Chem.Soc., 140, 2018
5LEJ
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The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with a 30-bp operator PrfA-box motif
分子名称: DNA (30-MER), Listeriolysin regulatory protein
著者Hall, M, Grundstrom, C, Begum, A, Lindberg, M, Sauer, U.H, Almqvist, F, Johansson, J, Sauer-Eriksson, A.E.
登録日2016-06-29
公開日2016-12-07
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for glutathione-mediated activation of the virulence regulatory protein PrfA in Listeria.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
6HWN
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BU of 6hwn by Molmil
Structure of Thermus thermophilus ClpP in complex with a tripeptide.
分子名称: ATP-dependent Clp protease proteolytic subunit, DI(HYDROXYETHYL)ETHER, Unknown tripeptide
著者Felix, J, Schanda, P, Fraga, H, Morlot, C.
登録日2018-10-12
公開日2019-09-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Mechanism of the allosteric activation of the ClpP protease machinery by substrates and active-site inhibitors.
Sci Adv, 5, 2019
5LEX
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BU of 5lex by Molmil
Native human 20S proteasome in Mg-Acetate at 2.2 Angstrom
分子名称: MAGNESIUM ION, PENTAETHYLENE GLYCOL, POTASSIUM ION, ...
著者Schrader, J, Henneberg, F, Mata, R, Tittmann, K, Schneider, T.R, Stark, H, Bourenkov, G, Chari, A.
登録日2016-06-30
公開日2016-08-17
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The inhibition mechanism of human 20S proteasomes enables next-generation inhibitor design.
Science, 353, 2016
2W1I
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Structure determination of Aurora Kinase in complex with inhibitor
分子名称: 4-[(2-{4-[(CYCLOPROPYLCARBAMOYL)AMINO]-1H-PYRAZOL-3-YL}-1H-BENZIMIDAZOL-6-YL)METHYL]MORPHOLIN-4-IUM, JAK2
著者Howard, S, Berdini, V, Boulstridge, J.A, Carr, M.G, Cross, D.M, Curry, J, Devine, L.A, Early, T.R, Fazal, L, Gill, A.L, Heathcote, M, Maman, S, Matthews, J.E, McMenamin, R.L, Navarro, E.F, O'Brien, M.A, O'Reilly, M, Rees, D.C, Reule, M, Tisi, D, Williams, G, Vinkovic, M, Wyatt, P.G.
登録日2008-10-17
公開日2009-01-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Fragment-Based Discovery of the Pyrazol-4-Yl Urea (at9283), a Multitargeted Kinase Inhibitor with Potent Aurora Kinase Activity.
J.Med.Chem., 52, 2009
6HBS
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Structure of PLP internal aldimine form of Sphingopyxis sp. MTA144 FumI protein
分子名称: Aminopentol aminotransferase, MAGNESIUM ION, PYRIDOXAL-5'-PHOSPHATE
著者Campopiano, D.J, Serpico, A, Marles-Wright, J.
登録日2018-08-13
公開日2019-08-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure of PLP internal aldimine form of Sphingopyxis sp. MTA144 FumI protein
To Be Published
5LH8
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Trypsin inhibitors for the treatment of pancreatitis - cpd 8
分子名称: (2~{S},4~{S})-1-[4-(aminomethyl)-3-methoxy-phenyl]carbonyl-4-(4-cyclopropyl-1,2,3-triazol-1-yl)-~{N}-[(1~{S},2~{R})-2-phenylcyclohexyl]pyrrolidine-2-carboxamide, CALCIUM ION, Cationic trypsin, ...
著者Schiering, N, D'Arcy, A, Skaanderup, P, Simic, O, Brandl, T, Woelcke, J.
登録日2016-07-08
公開日2016-08-10
最終更新日2019-10-16
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Trypsin inhibitors for the treatment of pancreatitis.
Bioorg.Med.Chem.Lett., 26, 2016
6H95
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BU of 6h95 by Molmil
AlbA, albicidin resistance protein
分子名称: Albicidin resistance protein
著者Koehnke, J, Sikandar, A.
登録日2018-08-03
公開日2018-11-21
最終更新日2019-04-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Adaptation of a Bacterial Multidrug Resistance System Revealed by the Structure and Function of AlbA.
J.Am.Chem.Soc., 140, 2018
2W6D
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BU of 2w6d by Molmil
BACTERIAL DYNAMIN-LIKE PROTEIN LIPID TUBE BOUND
分子名称: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, DYNAMIN FAMILY PROTEIN, GUANOSINE-5'-DIPHOSPHATE
著者Low, H.H, Sachse, C, Amos, L.A, Lowe, J.
登録日2008-12-18
公開日2009-12-22
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Structure of a Bacterial Dynamin-Like Protein Lipid Tube Provides a Mechanism for Assembly and Membrane Curving.
Cell(Cambridge,Mass.), 139, 2009
6HBG
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BU of 6hbg by Molmil
Echovirus 18 native particle
分子名称: Echovirus 18 viral protein 1, Echovirus 18 viral protein 2, Echovirus 18 viral protein 3, ...
著者Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P.
登録日2018-08-10
公開日2019-03-20
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Enterovirus particles expel capsid pentamers to enable genome release.
Nat Commun, 10, 2019
6HBV
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BU of 6hbv by Molmil
Structure of PLP internal aldimine form of Sphingopyxis sp. MTA144 FumI protein
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Aminopentol aminotransferase, MAGNESIUM ION, ...
著者Campopiano, D.J, Serpico, A, Marles-Wright, J.
登録日2018-08-13
公開日2019-08-28
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure of PLP internal aldimine form of Sphingopyxis sp. MTA144 FumI protein
To Be Published
2W7V
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BU of 2w7v by Molmil
periplasmic domain of EpsL from Vibrio parahaemolyticus
分子名称: 1,2-ETHANEDIOL, GENERAL SECRETION PATHWAY PROTEIN L, PHOSPHATE ION
著者Abendroth, J, Kreger, A.C, Abendroth, H, Sandkvist, M, Hol, W.G.J.
登録日2009-01-06
公開日2010-03-31
最終更新日2017-06-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Dimer Formed by the Periplasmic Domain of Epsl from the Type 2 Secretion System of Vibrio Parahaemolyticus.
J.Struct.Biol., 168, 2009
2WEA
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BU of 2wea by Molmil
ACID PROTEINASE (PENICILLOPEPSIN) (E.C.3.4.23.20) COMPLEX WITH PHOSPHONATE INHIBITOR: METHYL[CYCLO-7[(2R)-((N-VALYL) AMINO)-2-(HYDROXYL-(1S)-1-METHYOXYCARBONYL-2-PHENYLETHOXY) PHOSPHINYLOXY-ETHYL]-1-NAPHTHALENEACETAMIDE], SODIUM SALT
分子名称: METHYL[CYCLO-7[(2R)-((N-VALYL)AMINO)-2-(HYDROXYL-(1S)-1-METHYLOXYCARBONYL-2-PHENYLETHOXY)PHOSPHINYLOXY-ETHYL]-1-NAPHTHALENEACETAMIDE], PENICILLOPEPSIN, SULFATE ION, ...
著者Ding, J, Fraser, M.E, James, M.N.G.
登録日1998-02-03
公開日1998-05-27
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Macrocyclic Inhibitors of Penicillopepsin. II. X-Ray Crystallographic Analyses of Penicillopepsin Complexed with a P3-P1 Macrocyclic Peptidyl Inhibitor and with its Two Acyclic Analogues
J.Am.Chem.Soc., 120, 1998
5LU5
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BU of 5lu5 by Molmil
A quantum half-site enzyme
分子名称: 7-O-phosphono-D-glycero-alpha-D-manno-heptopyranose, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
著者Vivoli, M, Harmer, N.J, Pang, J.
登録日2016-09-08
公開日2017-12-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献A half-site multimeric enzyme achieves its cooperativity without conformational changes.
Sci Rep, 7, 2017
2WFW
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Structure and activity of the N-terminal substrate recognition domains in proteasomal ATPases - The Arc domain structure
分子名称: ARC
著者Djuranovic, S, Hartmann, M.D, Habeck, M, Ursinus, A, Zwickl, P, Martin, J, Lupas, A.N, Zeth, K.
登録日2009-04-15
公開日2009-05-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure and Activity of the N-Terminal Substrate Recognition Domains in Proteasomal Atpases.
Mol.Cell, 34, 2009
2W0P
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BU of 2w0p by Molmil
Crystal structure of the filamin A repeat 21 complexed with the migfilin peptide
分子名称: FILAMIN-A, FILAMIN-BINDING LIM PROTEIN 1, SULFATE ION
著者Ruskamo, S, Ylanne, J.
登録日2008-08-20
公開日2008-09-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Basis of the Migfilin-Filamin Interaction and Competition with Integrin {Beta} Tails.
J.Biol.Chem., 283, 2008
5LMW
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BU of 5lmw by Molmil
Llama nanobody PorM_02
分子名称: GLYCEROL, Nanobody
著者Roche, J, Gaubert, A, Leone, P, Roussel, A.
登録日2016-08-01
公開日2017-05-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Camelid nanobodies used as crystallization chaperones for different constructs of PorM, a component of the type IX secretion system from Porphyromonas gingivalis.
Acta Crystallogr F Struct Biol Commun, 73, 2017
5LQH
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BU of 5lqh by Molmil
A two-quartet G-quadruplex formed by human telomere in KCl solution at pH 5.0
分子名称: DNA (5'-D(*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*G)-3')
著者Galer, P, Wang, B, Sket, P, Plavec, J.
登録日2016-08-17
公開日2018-01-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Reversible pH Switch of Two-Quartet G-Quadruplexes Formed by Human Telomere.
Angew.Chem.Int.Ed.Engl., 55, 2016
6GVG
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BU of 6gvg by Molmil
Crystal structure of PI3K alpha in complex with 3-(2-Amino-benzooxazol-5-yl)-1-isopropyl-4-methyl-1H-pyrazolo[3,4-d]pyrimidin-6-ylamine
分子名称: 5-(6-azanyl-4-methyl-1-propan-2-yl-pyrazolo[3,4-d]pyrimidin-3-yl)-1,3-benzoxazol-2-amine, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
著者Ouvry, G, Aurelly, M, Bonnary, L, Borde, E, Bouix-Peter, C, Chantalat, L, Clary, L, Defoin-Platel, C, Deret, S, Forissier, M, Harris, C.S, Isabet, T, Lamy, L, Luzy, A.P, Pascau, J, Soulet, C, Taddei, A, Taquet, N, Tomas, L, Thoreau, E, Varvier, E, Vial, E, Hennequin, L.F.
登録日2018-06-21
公開日2019-10-02
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Impact of Minor Structural Modifications on Properties of a Series of mTOR Inhibitors.
Acs Med.Chem.Lett., 10, 2019
5LRS
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BU of 5lrs by Molmil
The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with glutathione and a 30-bp operator PrfA-box motif
分子名称: DNA (30-MER), GLUTATHIONE, Listeriolysin positive regulatory factor A
著者Hall, M, Grundstrom, C, Begum, A, Lindberg, M, Sauer, U.H, Almqvist, F, Johansson, J, Sauer-Eriksson, A.E.
登録日2016-08-19
公開日2016-12-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis for glutathione-mediated activation of the virulence regulatory protein PrfA in Listeria.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
2WDR
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BU of 2wdr by Molmil
E. coli succinate:quinone oxidoreductase (SQR) with pentachlorophenol bound
分子名称: FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Ruprecht, J, Yankovskaya, V, Maklashina, E, Iwata, S, Cecchini, G.
登録日2009-03-25
公開日2009-08-25
最終更新日2015-02-04
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure of Escherichia Coli Succinate:Quinone Oxidoreductase with an Occupied and Empty Quinone- Binding Site.
J.Biol.Chem., 284, 2009
2WDV
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E. coli succinate:quinone oxidoreductase (SQR) with an empty quinone- binding pocket
分子名称: FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Ruprecht, J, Yankovskaya, V, Maklashina, E, Iwata, S, Cecchini, G.
登録日2009-03-26
公開日2009-08-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure of Escherichia Coli Succinate:Quinone Oxidoreductase with an Occupied and Empty Quinone- Binding Site.
J.Biol.Chem., 284, 2009

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