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PDB: 42550 results

8J60
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Structural and mechanistic insight into ribosomal ITS2 RNA processing by nuclease-kinase machinery
Descriptor: LAS1 protein, Polynucleotide 5'-hydroxyl-kinase GRC3
Authors:Chen, J, Chen, H, Li, S, Lin, X, Hu, R, Zhang, K, Liu, L.
Deposit date:2023-04-24
Release date:2024-01-17
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Structural and mechanistic insights into ribosomal ITS2 RNA processing by nuclease-kinase machinery.
Elife, 12, 2024
8J21
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Cryo-EM structure of FFAR3 complex bound with butyrate acid
Descriptor: Free fatty acid receptor 3, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Tai, L, Li, F, Sun, X, Tang, W, Wang, J.
Deposit date:2023-04-14
Release date:2024-01-24
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Molecular recognition and activation mechanism of short-chain fatty acid receptors FFAR2/3.
Cell Res., 34, 2024
5EN2
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Molecular basis for antibody-mediated neutralization of New World hemorrhagic fever mammarenaviruses
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Mahmutovic, S, Clark, L, Levis, S, Briggiler, A, Enria, D, Harrison, S.C, Abraham, J.
Deposit date:2015-11-09
Release date:2015-12-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.821 Å)
Cite:Molecular Basis for Antibody-Mediated Neutralization of New World Hemorrhagic Fever Mammarenaviruses.
Cell Host Microbe, 18, 2015
5EOA
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BU of 5eoa by Molmil
Crystal structure of OPTN E50K mutant and TBK1 complex
Descriptor: Optineurin, Serine/threonine-protein kinase TBK1
Authors:Li, F, Xie, X, Liu, J, Pan, L.
Deposit date:2015-11-10
Release date:2016-09-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:Structural insights into the interaction and disease mechanism of neurodegenerative disease-associated optineurin and TBK1 proteins.
Nat Commun, 7, 2016
1YPL
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BU of 1ypl by Molmil
X-ray crystal structure of thrombin inhibited by synthetic cyanopeptide analogue RA-1008
Descriptor: GLYCEROL, Hirudin, N-(BENZYLSULFONYL)-L-LEUCYL-N-(4-{[AMINO(IMINO)METHYL]AMINO}BUTYL)-L-PROLINAMIDE, ...
Authors:Fokkens, J, Radau, G.
Deposit date:2005-01-31
Release date:2006-01-17
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Design and X-ray crystal structures of human thrombin with synthetic cyanopeptide-analogues.
Pharmazie, 62, 2007
8J5Y
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BU of 8j5y by Molmil
Structural and mechanistic insight into ribosomal ITS2 RNA processing by nuclease-kinase machinery
Descriptor: LAS1 isoform 1, Polynucleotide 5'-hydroxyl-kinase GRC3
Authors:Chen, J, Chen, H, Li, S, Lin, X, Hu, R, Zhang, K, Liu, L.
Deposit date:2023-04-24
Release date:2024-01-17
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Structural and mechanistic insights into ribosomal ITS2 RNA processing by nuclease-kinase machinery.
Elife, 12, 2024
1YPX
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BU of 1ypx by Molmil
Crystal Structure of the Putative Vitamin-B12 Independent Methionine Synthase from Listeria monocytogenes, Northeast Structural Genomics Target LmR13
Descriptor: PHOSPHATE ION, putative vitamin-B12 independent methionine synthase family protein
Authors:Forouhar, F, Chen, Y, Benach, J, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2005-01-31
Release date:2005-02-08
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of Putative Vitamin-B12 Independent Methionine Synthase from Listeria monocytogenes, Northeast Structural Genomics Target LmR13
To be Published
4QQ3
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BU of 4qq3 by Molmil
Inosine 5'-monophosphate dehydrogenase from Vibrio cholerae, deletion mutant, in complex with XMP
Descriptor: CHLORIDE ION, Inosine-5'-monophosphate dehydrogenase, XANTHOSINE-5'-MONOPHOSPHATE
Authors:Osipiuk, J, Maltseva, N, Makowska-Grzyska, M, Gu, M, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-06-26
Release date:2014-07-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Inosine 5'-monophosphate dehydrogenase from vibrio cholerae, deletion mutant, in complex with xmp
To be Published
5EQ0
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BU of 5eq0 by Molmil
Crystal Structure of chromodomain of CBX8 in complex with inhibitor UNC3866
Descriptor: Chromobox protein homolog 8, UNKNOWN ATOM OR ION, unc3866
Authors:Liu, Y, Tempel, W, Walker, J.R, Stuckey, J.I, Dickson, B.M, James, L.I, Frye, S.V, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2015-11-12
Release date:2015-12-23
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:A cellular chemical probe targeting the chromodomains of Polycomb repressive complex 1.
Nat.Chem.Biol., 12, 2016
8JM9
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BU of 8jm9 by Molmil
The cryo-EM structure of insect gustatory receptor Gr43a from Drosophila melanogaster
Descriptor: Gustatory receptor for sugar taste 43a
Authors:Ma, D, Guo, J.
Deposit date:2023-06-04
Release date:2024-02-07
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural basis for sugar perception by Drosophila gustatory receptors.
Science, 383, 2024
4R70
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Crystal structure of bacteriophytochrome RpBphP3 from photosynthetic bacterium R. palustris
Descriptor: BILIVERDINE IX ALPHA, Bacteriophytochrome (Light-regulated signal transduction histidine kinase), PhyB2
Authors:Yang, X, Kuk, J, Moffat, K.
Deposit date:2014-08-26
Release date:2015-07-15
Last modified:2015-08-05
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Light Signaling Mechanism of Two Tandem Bacteriophytochromes.
Structure, 23, 2015
8JMI
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BU of 8jmi by Molmil
The cryo-EM structure of insect gustatory receptor Gr64a from Drosophila melanogaster in complex with maltose
Descriptor: Gustatory receptor for sugar taste 64a, alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Ma, D, Guo, J.
Deposit date:2023-06-04
Release date:2024-02-07
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural basis for sugar perception by Drosophila gustatory receptors.
Science, 383, 2024
1YR5
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BU of 1yr5 by Molmil
1.7-A structure of calmodulin bound to a peptide from DAP kinase
Descriptor: 19-mer from Death-associated protein kinase 1, CALCIUM ION, calmodulin
Authors:Kursula, P, Vahokoski, J, Wilmanns, M.
Deposit date:2005-02-03
Release date:2006-07-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Recognition of human death-associated protein kinases by calmodulin
To be Published
5EGG
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BU of 5egg by Molmil
Crystal structure of human ubiquitin-conjugating enzyme UBCH5C
Descriptor: Ubiquitin-conjugating enzyme E2 D3
Authors:Zhu, L, Li, H, Wu, F, Zhu, J.
Deposit date:2015-10-27
Release date:2016-11-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural analysis of recombinant human ubiquitin-conjugating enzyme UbcH5c
Acta Pharm Sin B, 7, 2017
1YSN
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BU of 1ysn by Molmil
Solution structure of the anti-apoptotic protein Bcl-xL complexed with an acyl-sulfonamide-based ligand
Descriptor: 3-NITRO-N-{4-[2-(2-PHENYLETHYL)-1,3-BENZOTHIAZOL-5-YL]BENZOYL}-4-{[2-(PHENYLSULFANYL)ETHYL]AMINO}BENZENESULFONAMIDE, Apoptosis regulator Bcl-X
Authors:Oltersdorf, T, Elmore, S.W, Shoemaker, A.R, Armstrong, R.C, Augeri, D.J, Belli, B.A, Bruncko, M, Deckwerth, T.L, Dinges, J, Hajduk, P.J, Joseph, M.K, Kitada, S, Korsmeyer, S.J, Kunzer, A.R, Letai, A, Li, C, Mitten, M.J, Nettesheim, D.G, Ng, S, Nimmer, P.M, O'Connor, J.M, Oleksijew, A, Petros, A.M, Reed, J.C, Shen, W, Tahir, S.K, Thompson, C.B, Tomaselli, K.J, Wang, B, Wendt, M.D, Zhang, H, Fesik, S.W, Rosenberg, S.H.
Deposit date:2005-02-08
Release date:2005-06-07
Last modified:2023-11-29
Method:SOLUTION NMR
Cite:An inhibitor of Bcl-2 family proteins induces regression of solid tumours
Nature, 435, 2005
1W90
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BU of 1w90 by Molmil
CBM29-2 mutant D114A: Probing the Mechanism of Ligand Recognition by Family 29 Carbohydrate Binding Modules
Descriptor: 1,2-ETHANEDIOL, NON-CATALYTIC PROTEIN 1, SODIUM ION
Authors:Flint, J, Bolam, D.N, Nurizzo, D, Taylor, E.J, Williamson, M.P, Walters, C, Davies, G.J, Gilbert, H.J.
Deposit date:2004-10-01
Release date:2005-03-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Probing the Mechanism of Ligand Recognition in Family 29 Carbohydrate-Binding Modules
J.Biol.Chem., 280, 2005
5EFZ
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BU of 5efz by Molmil
Monoclinic structure of the acetyl esterase MekB
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, GLYCEROL, ...
Authors:Toelzer, C, Pal, S, Watzlawick, H, Altenbuchner, J, Niefind, K.
Deposit date:2015-10-26
Release date:2015-12-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:A novel esterase subfamily with alpha / beta-hydrolase fold suggested by structures of two bacterial enzymes homologous to l-homoserine O-acetyl transferases.
Febs Lett., 590, 2016
8JKE
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BU of 8jke by Molmil
AfsR(T337A) transcription activation complex
Descriptor: DNA(65-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Wang, Y, Zheng, J.
Deposit date:2023-06-01
Release date:2024-02-14
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Structural and functional characterization of AfsR, an SARP family transcriptional activator of antibiotic biosynthesis in Streptomyces.
Plos Biol., 22, 2024
1W8Z
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BU of 1w8z by Molmil
CBM29-2 mutant K85A: Probing the Mechanism of Ligand Recognition by Family 29 Carbohydrate Binding Modules
Descriptor: NON CATALYTIC PROTEIN 1
Authors:Flint, J, Bolam, D.N, Nurizzo, D, Taylor, E.J, Williamson, M.P, Walters, C, Davies, G.J, Gilbert, H.J.
Deposit date:2004-10-01
Release date:2005-03-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Probing the Mechanism of Ligand Recognition in Family 29 Carbohydrate-Binding Modules
J.Biol.Chem., 280, 2005
8JMA
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BU of 8jma by Molmil
The cryo-EM structure of insect gustatory receptor Gr43a from Drosophila melanogaster in complex with fructose
Descriptor: Gustatory receptor for sugar taste 43a, beta-D-fructofuranose
Authors:Ma, D, Guo, J.
Deposit date:2023-06-04
Release date:2024-02-07
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structural basis for sugar perception by Drosophila gustatory receptors.
Science, 383, 2024
8JME
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BU of 8jme by Molmil
The cryo-EM structure of insect gustatory receptor Gr64a from Drosophila melanogaster
Descriptor: Gustatory receptor for sugar taste 64a
Authors:Ma, D, Guo, J.
Deposit date:2023-06-04
Release date:2024-02-07
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structural basis for sugar perception by Drosophila gustatory receptors.
Science, 383, 2024
8JMH
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BU of 8jmh by Molmil
The cryo-EM structure of insect gustatory receptor Gr64a from Drosophila melanogaster in complex with sucrose
Descriptor: Gustatory receptor for sugar taste 64a, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
Authors:Ma, D, Guo, J.
Deposit date:2023-06-04
Release date:2024-02-07
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structural basis for sugar perception by Drosophila gustatory receptors.
Science, 383, 2024
1W8B
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BU of 1w8b by Molmil
Factor7 - 413 complex
Descriptor: (S)-[(R)-2-(4-BENZYLOXY-3-METHOXY-PHENYL)-2-(4-CARBAMIMIDOYL-PHENYLAMINO)-ACETYLAMINO]-PHENYL-ACETIC ACID, BLOOD COAGULATION FACTOR VIIA, CALCIUM ION
Authors:Ackermann, J, Alig, L, Banner, D.W, Boehm, H.-J, Groebke-Zbinden, K, Hilpert, K, Lave, T, Kuehne, H, Obst-Sander, U, Riederer, M.A, Stahl, M, Tschopp, T.B, Weber, L, Wessel, H.P.
Deposit date:2004-09-17
Release date:2005-10-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Selective and Orally Bioavailable Phenylglycine Tissue Factor/Factor Viia Inhibitors
Bioorg.Med.Chem.Lett., 15, 2005
1W63
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AP1 clathrin adaptor core
Descriptor: ADAPTER-RELATED PROTEIN COMPLEX 1 BETA 1 SUBUNIT, ADAPTER-RELATED PROTEIN COMPLEX 1 GAMMA 1 SUBUNIT, ADAPTER-RELATED PROTEIN COMPLEX 1 SIGMA 1A SUBUNIT, ...
Authors:Heldwein, E, Macia, E, Wang, J, Yin, H.L, Kirchhausen, T, Harrison, S.C.
Deposit date:2004-08-12
Release date:2004-09-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (4 Å)
Cite:Crystal Structure of the Clathrin Adaptor Protein 1 Core
Proc.Natl.Acad.Sci.USA, 101, 2004
5DL9
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Structure of Tetragonal Lysozyme in complex with Iodine solved by UWO Students
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, IODIDE ION, ...
Authors:Bednarski, R, Cirricione, N, Greco, A, Hodgson, R, Kent, S, McGowan, J, Notherm, B, Patt, M, Vue, L, Bianchetti, C.M.
Deposit date:2015-09-04
Release date:2015-09-16
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Structure of Tetragonal Lysozyme in complex with Iodine solved by UWO Students
To Be Published

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