Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42550 results

3BLJ
DownloadVisualize
BU of 3blj by Molmil
Crystal structure of human poly(ADP-ribose) polymerase 15, catalytic fragment
Descriptor: CHLORIDE ION, GLYCEROL, Poly(ADP-ribose) polymerase 15, ...
Authors:Karlberg, T, Lehtio, L, Arrowsmith, C.H, Berglund, H, Busam, R.D, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, I, Kallas, A, Kotenyova, T, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Welin, M, Weigelt, J, Structural Genomics Consortium (SGC)
Deposit date:2007-12-11
Release date:2007-12-25
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis for Lack of ADP-ribosyltransferase Activity in Poly(ADP-ribose) Polymerase-13/Zinc Finger Antiviral Protein.
J.Biol.Chem., 290, 2015
3C63
DownloadVisualize
BU of 3c63 by Molmil
Tetrameric Cytochrome cb562 (K34/H59/D62/H63/H73/A74/H77) Assembly Stabilized by Interprotein Zinc Coordination
Descriptor: CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, Soluble cytochrome b562, ...
Authors:Tezcan, F.A, Salgado, E.N, Lewis, R.A, Faraone-Mennella, J.
Deposit date:2008-02-02
Release date:2008-05-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Metal-mediated self-assembly of protein superstructures: influence of secondary interactions on protein oligomerization and aggregation.
J.Am.Chem.Soc., 130, 2008
3BU5
DownloadVisualize
BU of 3bu5 by Molmil
Crystal structure of the insulin receptor kinase in complex with IRS2 KRLB peptide and ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Insulin receptor substrate 2, MAGNESIUM ION, ...
Authors:Wu, J, Hubbard, S.R.
Deposit date:2007-12-31
Release date:2008-02-19
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and biochemical characterization of the KRLB region in insulin receptor substrate-2.
Nat.Struct.Mol.Biol., 15, 2008
3BNO
DownloadVisualize
BU of 3bno by Molmil
Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site (Br-derivative)
Descriptor: A site of human mitochondrial ribosome
Authors:Kondo, J, Westhof, E.
Deposit date:2007-12-14
Release date:2008-06-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The bacterial and mitochondrial ribosomal A-site molecular switches possess different conformational substates
Nucleic Acids Res., 36, 2008
2FI1
DownloadVisualize
BU of 2fi1 by Molmil
The crystal structure of a hydrolase from Streptococcus pneumoniae TIGR4
Descriptor: CALCIUM ION, hydrolase, haloacid dehalogenase-like family
Authors:Zhang, R, Zhou, M, Abdullah, J, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-12-27
Release date:2006-02-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The 1.4A crystal structure of a hydrolase from Streptococcus pneumoniae TIGR4
To be Published
3BS4
DownloadVisualize
BU of 3bs4 by Molmil
Crystal structure of uncharacterized protein PH0321 from Pyrococcus horikoshii in complex with an unknown peptide
Descriptor: Uncharacterized protein PH0321, Unknown peptide
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Hu, S, Romero, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-12-21
Release date:2008-01-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of uncharacterized protein PH0321 from Pyrococcus horikoshii in complex with an unknown peptide.
To be Published
2FJY
DownloadVisualize
BU of 2fjy by Molmil
Crystal Structure of B-form Bombyx mori Pheromone Binding Protein
Descriptor: Pheromone-binding protein
Authors:Lautenschlager, C, Leal, W.S, Clardy, J.
Deposit date:2006-01-03
Release date:2006-01-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Coil-to-helix transition and ligand release of Bombyx mori pheromone-binding protein.
Biochem.Biophys.Res.Commun., 335, 2005
3C19
DownloadVisualize
BU of 3c19 by Molmil
Crystal structure of protein MK0293 from Methanopyrus kandleri AV19
Descriptor: GLYCEROL, PHOSPHATE ION, Uncharacterized protein MK0293
Authors:Patskovsky, Y, Romero, R, Bonanno, J.B, Malashkevich, V, Dickey, M, Chang, S, Koss, J, Bain, K, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-01-22
Release date:2008-02-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of protein MK0293 from Methanopyrus kandleri AV19.
To be Published
3C1B
DownloadVisualize
BU of 3c1b by Molmil
The effect of H3 K79 dimethylation and H4 K20 trimethylation on nucleosome and chromatin structure
Descriptor: Histone 2, H2bf, Histone H2A type 1, ...
Authors:Lu, X, Simon, M, Chodaparambil, J, Hansen, J, Shokat, K, Luger, K.
Deposit date:2008-01-22
Release date:2008-10-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The effect of H3K79 dimethylation and H4K20 trimethylation on nucleosome and chromatin structure.
Nat.Struct.Mol.Biol., 15, 2008
2FLQ
DownloadVisualize
BU of 2flq by Molmil
Crystal Structure of Nitric Oxide Synthase from Geobacillus Stearothermophilus (ATCC 12980) complexed with L-arginine
Descriptor: ARGININE, Nitric Oxide Synthase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sudhamsu, J, Crane, B.R.
Deposit date:2006-01-06
Release date:2006-01-31
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure and Reactivity of a Thermostable Prokaryotic Nitric-oxide Synthase That Forms a Long-lived Oxy-Heme Complex.
J.Biol.Chem., 281, 2006
3C3E
DownloadVisualize
BU of 3c3e by Molmil
Crystal structure of 2-phospho-(S)-lactate transferase from Methanosarcina mazei in complex with Fo and GDP. Northeast Structural Genomics Consortium target MaR46
Descriptor: 1-deoxy-1-(8-hydroxy-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-D-ribitol, 2-phospho-L-lactate transferase, GUANOSINE-5'-DIPHOSPHATE
Authors:Forouhar, F, Abashidze, M, Xu, H, Grochowski, L.L, Seetharaman, J, Hussain, M, Kuzin, A.P, Chen, Y, Zhou, W, Xiao, R, Acton, T.B, Montelione, G.T, Galinier, A, White, R.H, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-01-28
Release date:2008-02-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Molecular insights into the biosynthesis of the f420 coenzyme.
J.Biol.Chem., 283, 2008
2ESX
DownloadVisualize
BU of 2esx by Molmil
The structure of the V3 region within gp120 of JR-FL HIV-1 strain (minimized average structure)
Descriptor: Envelope polyprotein GP160
Authors:Rosen, O, Sharon, M, Samson, A.O, Quadt, S.R, Anglister, J.
Deposit date:2005-10-27
Release date:2006-09-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Molecular switch for alternative conformations of the HIV-1 V3 region: Implications for phenotype conversion.
Proc.Natl.Acad.Sci.Usa, 13, 2006
2ESZ
DownloadVisualize
BU of 2esz by Molmil
The structure of the V3 region within gp120 of JR-FL HIV-1 strain (ensemble)
Descriptor: Envelope polyprotein GP160
Authors:Rosen, O, Sharon, M, Samson, A.O, Quadt, S.R, Anglister, J.
Deposit date:2005-10-27
Release date:2006-09-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Molecular switch for alternative conformations of the HIV-1 V3 region: Implications for phenotype conversion.
Proc.Natl.Acad.Sci.Usa, 13, 2006
1LY9
DownloadVisualize
BU of 1ly9 by Molmil
The impact of the physical and chemical environment on the molecular structure of Coprinus cinereus peroxidase
Descriptor: CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, Peroxidase
Authors:Houborg, K, Harris, P, Petersen, J.F.W, Rowland, P, Poulsen, J.-C.N, Schneider, P, Vind, J, Larsen, S.
Deposit date:2002-06-07
Release date:2002-06-14
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Impact of the physical and chemical environment on the molecular structure of Coprinus cinereus peroxidase.
Acta Crystallogr.,Sect.D, 59, 2003
2EUG
DownloadVisualize
BU of 2eug by Molmil
CRYSTAL STRUCTURE OF ESCHERICHIA COLI URACIL DNA GLYCOSYLASE AND ITS COMPLEXES WITH URACIL AND GLYCEROL: STRUCTURE AND GLYCOSYLASE MECHANISM REVISITED
Descriptor: PROTEIN (GLYCOSYLASE), URACIL
Authors:Xiao, G, Tordova, M, Jagadeesh, J, Drohat, A.C, Stivers, J.T, Gilliland, G.L.
Deposit date:1998-10-13
Release date:1999-10-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of Escherichia coli uracil DNA glycosylase and its complexes with uracil and glycerol: structure and glycosylase mechanism revisited.
Proteins, 35, 1999
3C6F
DownloadVisualize
BU of 3c6f by Molmil
Crystal structure of protein Bsu07140 from Bacillus subtilis
Descriptor: GLYCEROL, YetF protein
Authors:Patskovsky, Y, Min, T, Zhang, A, Adams, J, Groshong, C, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-02-04
Release date:2008-02-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of protein Bsu07140 from Bacillus subtilis.
To be Published
3C4S
DownloadVisualize
BU of 3c4s by Molmil
Crystal structure of the Ssl0352 protein from Synechocystis sp. Northeast Structural Genomics Consortium target SgR42
Descriptor: Ssl0352 protein
Authors:Vorobiev, S.M, Chen, Y, Seetharaman, J, Wang, D, Maglaqui, M, Janjua, H, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-01-30
Release date:2008-02-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the Ssl0352 protein from Synechocystis sp.
To be Published
2EXE
DownloadVisualize
BU of 2exe by Molmil
Crystal structure of the phosphorylated CLK3
Descriptor: Dual specificity protein kinase CLK3
Authors:Papagrigoriou, E, Rellos, P, Das, S, Bullock, A, Ball, L.J, Turnbull, A, Savitsky, P, Fedorov, O, Johansson, C, Ugochukwu, E, Sobott, F, von Delft, F, Edwards, A, Sundstrom, M, Weigelt, J, Arrowsmith, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2005-11-08
Release date:2005-11-15
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of the phosphorylated CLK3
TO BE PUBLISHED
3C97
DownloadVisualize
BU of 3c97 by Molmil
Crystal structure of the response regulator receiver domain of a signal transduction histidine kinase from Aspergillus oryzae
Descriptor: Signal transduction histidine kinase
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Chang, S, Romero, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-02-15
Release date:2008-03-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the response regulator receiver domain of a signal transduction histidine kinase from Aspergillus oryzae.
To be Published
3BMQ
DownloadVisualize
BU of 3bmq by Molmil
Structure of Pteridine Reductase 1 (PTR1) from Trypanosoma brucei in ternary complex with cofactor (NADP+) and inhibitor (Compound AX5)
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 6-(benzylsulfanyl)pyrimidine-2,4-diamine, ACETATE ION, ...
Authors:Martini, V.P, Iulek, J, Hunter, W.N.
Deposit date:2007-12-13
Release date:2008-12-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-based design of pteridine reductase inhibitors targeting african sleeping sickness and the leishmaniases.
J.Med.Chem., 53, 2010
2FHQ
DownloadVisualize
BU of 2fhq by Molmil
Crystal Structure of General Stress Protein from Bacteroides thetaiotaomicron
Descriptor: putative general stress protein
Authors:Kim, Y, Hatzos, C, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-12-26
Release date:2006-02-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal Structure of General Stress Protein from Bacteroides thetaiotaomicron
To be Published, 2006
2FDH
DownloadVisualize
BU of 2fdh by Molmil
Crystal Structure of AlkB in complex with Mn(II), 2-oxoglutarate, and methylated trinucleotide T-meA-T
Descriptor: 2-OXOGLUTARIC ACID, 5'-D(P*TP*(MA7)P*T)-3', Alkylated DNA repair protein alkB, ...
Authors:Yu, B, Benach, J, Edstrom, W.C, Gibney, B.R, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2005-12-14
Release date:2006-02-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of catalytic complexes of the oxidative DNA/RNA repair enzyme AlkB.
Nature, 439, 2006
3BQW
DownloadVisualize
BU of 3bqw by Molmil
Crystal structure of the putative capsid protein of prophage (E.coli CFT073)
Descriptor: Putative capsid protein of prophage
Authors:Zhang, R, Hatzos, C, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-12-20
Release date:2008-01-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of the putative capsid protein of prophage (E.coli CFT073).
To be Published
1HH9
DownloadVisualize
BU of 1hh9 by Molmil
ANTI-P24 (HIV-1) FAB FRAGMENT CB41 COMPLEXED WITH A PEPTIDE
Descriptor: IGG2A KAPPA ANTIBODY CB41 (HEAVY CHAIN), IGG2A KAPPA ANTIBODY CB41 (LIGHT CHAIN), PEP-2
Authors:Hahn, M, Wessner, H, Schneider-Mergener, J, Hohne, W.
Deposit date:2000-12-21
Release date:2001-01-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Evolutionary Transition Pathways for Changing Peptide Ligand Specificity and Structure
Embo J., 19, 2000
2ERS
DownloadVisualize
BU of 2ers by Molmil
Solution structure of the Interleukin-15 receptor sushi domain
Descriptor: Interleukin-15 receptor alpha chain
Authors:Lorenzen, I, Dingley, A.J, Grotzinger, J.
Deposit date:2005-10-25
Release date:2006-02-07
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:The structure of the interleukin-15 alpha receptor and its implications for ligand binding.
J.Biol.Chem., 281, 2006

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon