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PDB: 42507 results

7LIG
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BU of 7lig by Molmil
The structure of the insect olfactory receptor OR5 from Machilis hrabei in complex with DEET
Descriptor: MhOR5, N,N-diethyl-3-methylbenzamide
Authors:del Marmol, J, Ruta, V.
Deposit date:2021-01-27
Release date:2021-08-11
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:The structural basis of odorant recognition in insect olfactory receptors.
Nature, 597, 2021
8AOX
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BU of 8aox by Molmil
CryoEM structure of the Chikungunya virus nsP1 capping pores in complex with SAM
Descriptor: S-ADENOSYLMETHIONINE, ZINC ION, mRNA-capping enzyme nsP1
Authors:Jones, R, Hons, M, Reguera, J.
Deposit date:2022-08-08
Release date:2023-03-29
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis and dynamics of Chikungunya alphavirus RNA capping by nsP1 capping pores.
Proc.Natl.Acad.Sci.USA, 120, 2023
7LHH
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BU of 7lhh by Molmil
Cryo-EM structure of E. coli P pilus tip assembly intermediate PapC-PapD-PapK-PapG in the second conformation
Descriptor: Chaperone protein PapD, Fimbrial adapter PapK, P fimbria tip G-adhesin PapG-II, ...
Authors:Du, M, Yuan, Z, Werneburg, G, Henderson, N, Chauhan, H, Kovach, A, Zhao, G, Johl, J, Li, H, Thanassi, D.
Deposit date:2021-01-23
Release date:2021-08-11
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (7.2 Å)
Cite:Processive dynamics of the usher assembly platform during uropathogenic Escherichia coli P pilus biogenesis.
Nat Commun, 12, 2021
5DGU
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BU of 5dgu by Molmil
Crystal Structure of HIV-1 Protease Inhibitors Containing Substituted fused-Tetrahydropyranyl Tetrahydrofuran as P2-Ligand GRL-004-11A
Descriptor: (3R,3aR,4S,7aS)-3-methoxyhexahydro-4H-furo[2,3-b]pyran-4-yl [(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}-1-phenylbutan-2-yl]carbamate, ACETATE ION, CHLORIDE ION, ...
Authors:Agniswamy, J, Wang, Y.-F, Weber, I.T.
Deposit date:2015-08-28
Release date:2015-10-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Design, synthesis, biological evaluation and X-ray structural studies of HIV-1 protease inhibitors containing substituted fused-tetrahydropyranyl tetrahydrofuran as P2-ligands.
Org.Biomol.Chem., 13, 2015
5JPS
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BU of 5jps by Molmil
Structure of the Zika Virus NS3 Helicase Domain
Descriptor: ns3 helicase
Authors:Jia, Z, Wang, J.
Deposit date:2016-05-04
Release date:2017-05-17
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structure of the Zika Virus NS3 Helicase Domain
To Be Published
8AOW
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BU of 8aow by Molmil
CryoEM structure of the Chikungunya virus nsP1 capping pores in complex with m7GTP and SAH ligands
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Jones, R, Hons, M, Reguera, J.
Deposit date:2022-08-08
Release date:2023-03-29
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis and dynamics of Chikungunya alphavirus RNA capping by nsP1 capping pores.
Proc.Natl.Acad.Sci.USA, 120, 2023
8AEM
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BU of 8aem by Molmil
Structure of Compound 13 bound to CK2alpha
Descriptor: 2-(5-chloranyl-1H-indol-3-yl)ethanenitrile, ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Brear, P, Fusco, C, Atkinson, E, Iegre, J, Francis-Newton, N, Venkotaraman, A, Spring, D, Hyvonen, M.
Deposit date:2022-07-13
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A fragment-based approach leading to the discovery of inhibitors of CK2 alpha with a novel mechanism of action.
Rsc Med Chem, 13, 2022
7LIC
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BU of 7lic by Molmil
The structure of the insect olfactory receptor OR5 from Machilis hrabei
Descriptor: MhOR5
Authors:del Marmol, J, Ruta, V.
Deposit date:2021-01-26
Release date:2021-08-11
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The structural basis of odorant recognition in insect olfactory receptors.
Nature, 597, 2021
1LJZ
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BU of 1ljz by Molmil
NMR structure of an AChR-peptide (Torpedo Californica, alpha-subunit residues 182-202) in complex with alpha-Bungarotoxin
Descriptor: Acetylcholine receptor protein, alpha-Bungarotoxin
Authors:Samson, A.O, Scherf, T, Eisenstein, M, Chill, J.H, Anglister, J.
Deposit date:2002-04-23
Release date:2002-07-17
Last modified:2013-07-24
Method:SOLUTION NMR
Cite:The mechanism for acetylcholine receptor inhibition by alpha-neurotoxins and species-specific resistance to alpha-bungarotoxin revealed by NMR.
Neuron, 35, 2002
5DHR
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BU of 5dhr by Molmil
Crystal structure of NAD kinase 1 from Listeria monocytogenes in complex with a novel inhibitor
Descriptor: 5'-azido-8-[(2-{[2-(1H-benzimidazol-2-yl)ethyl]amino}-2-oxoethyl)sulfanyl]-5'-deoxyadenosine, CITRIC ACID, GLYCEROL, ...
Authors:Gelin, M, Paoletti, J, Assairi, L, Huteau, V, Pochet, S, Labesse, G.
Deposit date:2015-08-31
Release date:2016-09-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:8-Thioalkyl-adenosine derivatives inhibit Listeria monocytogenes NAD kinase through a novel binding mode.
Eur.J.Med.Chem., 124, 2016
8KDC
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BU of 8kdc by Molmil
Cryo-EM structure of the human parainfluenza virus hPIV3 L-P polymerase in monomeric form
Descriptor: MAGNESIUM ION, Phosphoprotein, RNA-directed RNA polymerase L, ...
Authors:Xie, J, Wang, L, Zhai, G, Wu, D, Lin, Z, Wang, M, Yan, X, Gao, L, Huang, X, Fearns, R, Chen, S.
Deposit date:2023-08-09
Release date:2024-04-24
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis for dimerization of a paramyxovirus polymerase complex.
Nat Commun, 15, 2024
3C1R
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BU of 3c1r by Molmil
Crystal structure of oxidized GRX1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Glutaredoxin-1
Authors:Yu, J, Zhou, C.Z.
Deposit date:2008-01-24
Release date:2008-12-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Glutathionylation-triggered conformational changes of glutaredoxin Grx1 from the yeast Saccharomyces cerevisiae.
Proteins, 72, 2008
8OKE
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BU of 8oke by Molmil
Carbonic Anhydrase IX like mutant in Complex with Steriod_Sulphamoyl inhibitor AKI_1
Descriptor: Carbonic anhydrase 2, ZINC ION, [(3~{S},8~{R},9~{S},10~{R},13~{S},14~{S})-10,13-dimethyl-17-oxidanylidene-1,2,3,4,7,8,9,11,12,14,15,16-dodecahydrocyclopenta[a]phenanthren-3-yl] sulfamate
Authors:Brynda, J, Rezacova, P.M, Kudova, E.
Deposit date:2023-03-28
Release date:2024-04-10
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Carbonic Anhydrase II in Complex with Steriod_Sulphamoyl
To Be Published
1H4B
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BU of 1h4b by Molmil
SOLUTION STRUCTURE OF THE BIRCH POLLEN ALLERGEN BET V 4
Descriptor: CALCIUM ION, POLCALCIN BET V 4
Authors:Neudecker, P, Nerkamp, J, Eisenmann, A, Lauber, T, Lehmann, K, Schweimer, K, Roesch, P.
Deposit date:2003-02-26
Release date:2004-02-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure, Dynamics, and Hydrodynamics of the Calcium-Bound Cross-Reactive Birch Pollen Allergen Bet V 4 Reveal a Canonical Monomeric Two EF-Hand Assembly with a Regulatory Function
J.Mol.Biol., 336, 2004
7LID
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BU of 7lid by Molmil
The structure of the insect olfactory receptor OR5 from Machilis hrabei in complex with eugenol
Descriptor: 2-methoxy-4-(prop-2-en-1-yl)phenol, MhOR5
Authors:del Marmol, J, Ruta, V.
Deposit date:2021-01-27
Release date:2021-08-11
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:The structural basis of odorant recognition in insect olfactory receptors.
Nature, 597, 2021
7LHI
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BU of 7lhi by Molmil
Cryo-EM structure of E. coli P pilus tip assembly intermediate PapC-PapD-PapK-PapF-PapG
Descriptor: Chaperone protein PapD, Fimbrial adapter PapK, Fimbrial protein, ...
Authors:Du, M, Yuan, Z, Werneburg, G, Henderson, N, Chauhan, H, Kovach, A, Zhao, G, Johl, J, Li, H, Thanassi, D.
Deposit date:2021-01-23
Release date:2021-08-11
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (7.6 Å)
Cite:Processive dynamics of the usher assembly platform during uropathogenic Escherichia coli P pilus biogenesis.
Nat Commun, 12, 2021
1GNN
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BU of 1gnn by Molmil
HIV-1 PROTEASE MUTANT WITH VAL 82 REPLACED BY ASN (V82N) COMPLEXED WITH U89360E (INHIBITOR)
Descriptor: HIV-1 PROTEASE, N-[[1-[N-ACETAMIDYL]-[1-CYCLOHEXYLMETHYL-2-HYDROXY-4-ISOPROPYL]-BUT-4-YL]-CARBONYL]-GLUTAMINYL-ARGINYL-AMIDE
Authors:Hong, L, Treharne, A, Hartsuck, J.A, Foundling, S, Tang, J.
Deposit date:1996-05-04
Release date:1996-11-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of complexes of a peptidic inhibitor with wild-type and two mutant HIV-1 proteases.
Biochemistry, 35, 1996
4OMP
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BU of 4omp by Molmil
Crystal structure of the intertwined dimer of the c-Src tyrosine kinase SH3 domain mutant Q128K
Descriptor: DI(HYDROXYETHYL)ETHER, Proto-oncogene tyrosine-protein kinase Src, TRIETHYLENE GLYCOL
Authors:Camara-Artigas, A, Bacarizo, J.
Deposit date:2014-01-27
Release date:2014-12-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Electrostatic Effects in the Folding of the SH3 Domain of the c-Src Tyrosine Kinase: pH-Dependence in 3D-Domain Swapping and Amyloid Formation.
Plos One, 9, 2014
8OKG
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BU of 8okg by Molmil
Carbonic Anhydrase IX like mutant in Complex with Steriod_Sulphamoyl inhibitor AKI_13
Descriptor: Carbonic anhydrase 2, ZINC ION, [(3~{S},8~{S},9~{S},10~{R},13~{S},14~{S},17~{S})-17-methanoyl-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1~{H}-cyclopenta[a]phenanthren-3-yl] sulfamate
Authors:Brynda, J, Rezacova, P.M, Kudova, E.
Deposit date:2023-03-28
Release date:2024-04-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Carbonic Anhydrase II in Complex with Steriod_Sulphamoyl
To Be Published
3BX1
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BU of 3bx1 by Molmil
Complex between the Barley alpha-Amylase/Subtilisin Inhibitor and the subtilisin Savinase
Descriptor: Alpha-amylase/subtilisin inhibitor, CALCIUM ION, CHLORIDE ION, ...
Authors:Micheelsen, P.O, Vevodova, J, Wilson, K, Skjot, M.
Deposit date:2008-01-11
Release date:2008-07-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and Mutational Analyses of the Interaction between the Barley alpha-Amylase/Subtilisin Inhibitor and the Subtilisin Savinase Reveal a Novel Mode of Inhibition
J.Mol.Biol., 380, 2008
8KDB
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BU of 8kdb by Molmil
Cryo-EM structure of the human parainfluenza virus hPIV3 L-P polymerase in dimeric form
Descriptor: MAGNESIUM ION, Phosphoprotein, RNA-directed RNA polymerase L, ...
Authors:Xie, J, Wang, L, Zhai, G, Wu, D, Lin, Z, Wang, M, Yan, X, Gao, L, Huang, X, Fearns, R, Chen, S.
Deposit date:2023-08-09
Release date:2024-04-24
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis for dimerization of a paramyxovirus polymerase complex.
Nat Commun, 15, 2024
5DHP
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BU of 5dhp by Molmil
Crystal structure of NAD kinase 1 from Listeria monocytogenes in complex with a novel inhibitor
Descriptor: 8-({2-oxo-2-[(2-phenylethyl)amino]ethyl}sulfanyl)adenosine, CITRIC ACID, GLYCEROL, ...
Authors:Gelin, M, Paoletti, J, Assairi, L, Huteau, V, Pochet, S, Labesse, G.
Deposit date:2015-08-31
Release date:2016-09-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:8-Thioalkyl-adenosine derivatives inhibit Listeria monocytogenes NAD kinase through a novel binding mode.
Eur.J.Med.Chem., 124, 2016
5KBL
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BU of 5kbl by Molmil
Candida Albicans Superoxide Dismutase 5 (SOD5), E110Q Mutant
Descriptor: COPPER (I) ION, Cell surface Cu-only superoxide dismutase 5, SULFATE ION
Authors:Galaleldeen, A, Peterson, R.L, Villarreal, J, Taylor, A.B, Hart, P.J.
Deposit date:2016-06-03
Release date:2016-08-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.414 Å)
Cite:The Phylogeny and Active Site Design of Eukaryotic Copper-only Superoxide Dismutases.
J.Biol.Chem., 291, 2016
8JYY
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BU of 8jyy by Molmil
Crystal structure of the gasdermin-like protein RCD-1-2 from Neurospora crassa
Descriptor: RCD-1-2
Authors:Li, Y, Hou, Y.J, Ding, J.
Deposit date:2023-07-04
Release date:2024-05-01
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Cleavage-independent activation of ancient eukaryotic gasdermins and structural mechanisms.
Science, 384, 2024
1GNM
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BU of 1gnm by Molmil
HIV-1 PROTEASE MUTANT WITH VAL 82 REPLACED BY ASP (V82D) COMPLEXED WITH U89360E (INHIBITOR)
Descriptor: HIV-1 PROTEASE, N-[[1-[N-ACETAMIDYL]-[1-CYCLOHEXYLMETHYL-2-HYDROXY-4-ISOPROPYL]-BUT-4-YL]-CARBONYL]-GLUTAMINYL-ARGINYL-AMIDE
Authors:Hong, L, Treharne, A, Hartsuck, J.A, Foundling, S, Tang, J.
Deposit date:1996-05-04
Release date:1996-11-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of complexes of a peptidic inhibitor with wild-type and two mutant HIV-1 proteases.
Biochemistry, 35, 1996

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