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PDB: 42550 results

3CU8
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BU of 3cu8 by Molmil
Impaired binding of 14-3-3 to Raf1 is linked to Noonan and LEOPARD syndrome
Descriptor: 14-3-3 protein zeta/delta, MAGNESIUM ION, PROPANOIC ACID, ...
Authors:Schumacher, B, Weyand, M, Kuhlmann, J, Ottmann, C.
Deposit date:2008-04-16
Release date:2009-05-05
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Impaired binding of 14-3-3 to C-RAF in Noonan syndrome suggests new approaches in diseases with increased Ras signaling.
Mol. Cell. Biol., 30, 2010
6G18
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BU of 6g18 by Molmil
Cryo-EM structure of a late human pre-40S ribosomal subunit - State C
Descriptor: 40S ribosomal protein S11, 40S ribosomal protein S12, 40S ribosomal protein S13, ...
Authors:Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R.
Deposit date:2018-03-20
Release date:2018-06-06
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Visualizing late states of human 40S ribosomal subunit maturation.
Nature, 558, 2018
6G4A
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BU of 6g4a by Molmil
FLN5 (full length)
Descriptor: Gelation factor
Authors:Waudby, C.A, Wlodarski, T, Karyadi, M.-E, Cassaignau, A.M.E, Chan, S.H.S, Wentink, A.S, Schmidt-Engler, J.M, Camilloni, C, Vendruscolo, M, Cabrita, L.D, Christodoulou, J.
Deposit date:2018-03-27
Release date:2019-04-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Mapping energy landscapes of a growing filamin domain reveals an intermediate associated with proline isomerization during biosynthesis
To Be Published
6BK5
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BU of 6bk5 by Molmil
Inactive choanoflagellate E3 ubiquitin ligase Cbl TKB
Descriptor: CALCIUM ION, Ubiquitin Ligase Cbl
Authors:Amacher, J.F, Kuriyan, J.
Deposit date:2017-11-07
Release date:2018-03-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Phosphorylation control of the ubiquitin ligase Cbl is conserved in choanoflagellates.
Protein Sci., 27, 2018
6FM0
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BU of 6fm0 by Molmil
Deoxyguanylosuccinate synthase (DgsS) and ATP structure at 1.7 Angstrom resolution
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Adenylosuccinate synthetase
Authors:Sleiman, D, Loc'h, J, Haouz, A, Kaminski, P.A.
Deposit date:2018-01-29
Release date:2019-06-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A third purine biosynthetic pathway encoded by aminoadenine-based viral DNA genomes.
Science, 372, 2021
6G4S
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BU of 6g4s by Molmil
Cryo-EM structure of a late human pre-40S ribosomal subunit - State B
Descriptor: 40S ribosomal protein S11, 40S ribosomal protein S13, 40S ribosomal protein S14, ...
Authors:Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R.
Deposit date:2018-03-28
Release date:2018-06-06
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Visualizing late states of human 40S ribosomal subunit maturation.
Nature, 558, 2018
6BMI
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BU of 6bmi by Molmil
Crystal Structure of GltPh R397C in complex with L-Serine
Descriptor: Glutamate transporter homolog, SERINE, SODIUM ION
Authors:Font, J, Scopelliti, A.J, Vandenberg, R.J, Boudker, O, Ryan, R.M.
Deposit date:2017-11-14
Release date:2018-01-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structural characterisation reveals insights into substrate recognition by the glutamine transporter ASCT2/SLC1A5.
Nat Commun, 9, 2018
3D1G
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BU of 3d1g by Molmil
Structure of a small molecule inhibitor bound to a DNA sliding clamp
Descriptor: DNA polymerase III subunit beta, [(5R)-5-(2,3-dibromo-5-ethoxy-4-hydroxybenzyl)-4-oxo-2-thioxo-1,3-thiazolidin-3-yl]acetic acid
Authors:Georgescu, R.E, Yurieva, O, Seung-Sup, K, Kuriyan, J, Kong, X.-P, O'Donnell, M.
Deposit date:2008-05-05
Release date:2008-07-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structure of a small-molecule inhibitor of a DNA polymerase sliding clamp.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3D10
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BU of 3d10 by Molmil
Crystal Structure of S100B in the Calcium and Zinc Loaded State at pH 10.0
Descriptor: CALCIUM ION, Protein S100-B, TRIETHYLENE GLYCOL, ...
Authors:Ostendorp, T, Diez, J, Heizmann, C.W, Fritz, G.
Deposit date:2008-05-02
Release date:2009-04-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The crystal structures of human S100B in the zinc- and calcium-loaded state at three pH values reveal zinc ligand swapping.
Biochim.Biophys.Acta, 1813, 2011
3D29
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BU of 3d29 by Molmil
Proteasome Inhibition by Fellutamide B
Descriptor: (3R)-3-HYDROXYDODECANOIC ACID, Fellutamide B, PRE10 isoform 1, ...
Authors:Groll, M, Hines, J, Fahnestock, M, Crews, M.C.
Deposit date:2008-05-07
Release date:2008-06-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Proteasome Inhibition by Fellutamide B Induces Nerve Growth Factor Synthesis
Chem.Biol., 15, 2008
3D65
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BU of 3d65 by Molmil
Crystal structure of Textilinin-1, a Kunitz-type serine protease inhibitor from the Australian Common Brown snake venom, in complex with trypsin
Descriptor: CALCIUM ION, Cationic trypsin, Textilinin
Authors:Millers, E.-K.I, Masci, P.P, Lavin, M.F, de Jersey, J, Guddat, L.W.
Deposit date:2008-05-19
Release date:2009-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure of Textilinin-1, a Kunitz-type serine protease inhibitor from the Australian Common Brown snake venom, in complex with trypsin
To be Published
3D6W
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BU of 3d6w by Molmil
LytTr DNA-binding domain of putative methyl-accepting/DNA response regulator from Bacillus cereus.
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, MAGNESIUM ION, ...
Authors:Osipiuk, J, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-05-20
Release date:2008-07-15
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray crystal structure of LytTr DNA-binding domain of putative methyl-accepting/DNA response regulator from Bacillus cereus.
To be Published
3D7F
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BU of 3d7f by Molmil
A high resolution crystal structure of human glutamate carboxypeptidase II (GCPII) in a complex with DCIT, a urea-based inhibitor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Lubkowski, J, Barinka, C.
Deposit date:2008-05-21
Release date:2008-12-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Interactions between Human Glutamate Carboxypeptidase II and Urea-Based Inhibitors: Structural Characterization
J.Med.Chem., 51, 2008
6FSA
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BU of 6fsa by Molmil
Beta-Cardiac myosin post-rigor
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, FORMIC ACID, ...
Authors:Robert-Paganin, J, Auguin, D, Houdusse, A.
Deposit date:2018-02-19
Release date:2018-07-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Hypertrophic cardiomyopathy disease results from disparate impairments of cardiac myosin function and auto-inhibition.
Nat Commun, 9, 2018
3CEW
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BU of 3cew by Molmil
Crystal structure of a cupin protein (BF4112) from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR205
Descriptor: Uncharacterized cupin protein, ZINC ION
Authors:Forouhar, F, Chen, Y, Seetharaman, J, Mao, L, Xiao, R, Ciccosanti, C, Foote, E.L, Maglaqui, M, Wang, H, Baran, M.C, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-02-29
Release date:2008-03-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal structure of a cupin protein (BF4112) from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR205.
To be Published
1ELM
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BU of 1elm by Molmil
CADMIUM-SUBSTITUTED BOVINE PACREATIC CARBOXYPEPTIDASE A (ALFA-FORM) AT PH 5.5 AND 2 MM CHLORIDE IN MONOCLINIC CRYSTAL FORM.
Descriptor: CADMIUM ION, CARBOXYPEPTIDASE A
Authors:Jensen, F, Bukrinsky, T, Bjerrum, J, Larsen, S.
Deposit date:2000-03-14
Release date:2002-06-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three high-resolution crystal structures of cadmium-substituted carboxypeptidase A provide insight into the enzymatic function
J.BIOL.INORG.CHEM., 7, 2002
6G0E
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BU of 6g0e by Molmil
BRD4 (BD1) in complex with APSC-derived ligands
Descriptor: 4-[2-(4-cyclohexylpiperazin-4-ium-1-yl)-2-oxidanylidene-ethyl]sulfanyl-1-ethyl-quinolin-2-one, Bromodomain-containing protein 4, FORMIC ACID, ...
Authors:Pretzel, J, Humbeck, L.
Deposit date:2018-03-18
Release date:2020-01-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.613 Å)
Cite:Discovery of an Unexpected Similarity in Ligand Binding Between BRD4 and PPARgamma
Chemrxiv, 2019
3D7T
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BU of 3d7t by Molmil
Structural basis for the recognition of c-Src by its inactivator Csk
Descriptor: Proto-oncogene tyrosine-protein kinase Src, STAUROSPORINE, Tyrosine-protein kinase CSK
Authors:Levinson, N.M, Seeliger, M.A, Cole, P.A, Kuriyan, J.
Deposit date:2008-05-21
Release date:2008-08-05
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.899 Å)
Cite:Structural basis for the recognition of c-Src by its inactivator Csk.
Cell(Cambridge,Mass.), 134, 2008
6G0G
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BU of 6g0g by Molmil
BRD4 (BD1) in complex with APSC-derived ligands (e.g. sulfasalazine)
Descriptor: 1,2-ETHANEDIOL, 2-HYDROXY-(5-([4-(2-PYRIDINYLAMINO)SULFONYL]PHENYL)AZO)BENZOIC ACID, Bromodomain-containing protein 4, ...
Authors:Humbeck, L, Pretzel, J.
Deposit date:2018-03-18
Release date:2020-01-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.478 Å)
Cite:Discovery of an Unexpected Similarity in Ligand Binding Between BRD4 and PPARgamma
Chemrxiv, 2019
3CNG
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BU of 3cng by Molmil
Crystal structure of NUDIX hydrolase from Nitrosomonas europaea
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Osipiuk, J, Xu, X, Zheng, H, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-03-25
Release date:2008-04-08
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray crystal structure of NUDIX hydrolase from Nitrosomonas europaea.
To be Published
6G0W
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BU of 6g0w by Molmil
Human PARP14 (ARTD8), catalytic fragment in complex with inhibitor MCD72
Descriptor: 4-[3-[4-(4-fluorophenyl)piperidin-1-yl]carbonylphenoxy]benzamide, Poly [ADP-ribose] polymerase 14
Authors:Karlberg, T, Thorsell, A.G, Holechek, J, Lease, R, Ferraris, D, Schuler, H.
Deposit date:2018-03-20
Release date:2018-05-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Design, synthesis and evaluation of potent and selective inhibitors of mono-(ADP-ribosyl)transferases PARP10 and PARP14.
Bioorg. Med. Chem. Lett., 28, 2018
3CNW
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BU of 3cnw by Molmil
Three-dimensional structure of the protein XoxI (Q81AY6) from Bacillus cereus. Northeast Structural Genomics Consortium target BcR196.
Descriptor: Protein XoxI
Authors:Kuzin, A.P, Abashidze, M, Seetharaman, J, Wang, H, Ciccosanti, C, Mao, L, Xiao, R, Nair, R, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-03-26
Release date:2008-04-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Three-dimensional structure of the protein XoxI (Q81AY6) from Bacillus cereus. Northeast Structural Genomics Consortium target BcR196.
To Be Published
3CGM
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BU of 3cgm by Molmil
Crystal structure of thermophilic SlyD
Descriptor: GLYCEROL, NICKEL (II) ION, Peptidyl-prolyl cis-trans isomerase, ...
Authors:Loew, C, Neumann, P, Stubbs, M.T, Balbach, J.
Deposit date:2008-03-06
Release date:2009-03-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Crystal Structure Determination and Functional Characterization of the Metallochaperone SlyD from Thermus thermophilus
J.Mol.Biol., 398, 2010
6G41
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BU of 6g41 by Molmil
Crystal structure of SeMet-labeled mavirus penton protein
Descriptor: Minor capsid protein
Authors:Born, D, Reuter, L, Meinhart, A, Reinstein, J.
Deposit date:2018-03-26
Release date:2018-07-04
Last modified:2018-07-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Capsid protein structure, self-assembly, and processing reveal morphogenesis of the marine virophage mavirus.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6G4W
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BU of 6g4w by Molmil
Cryo-EM structure of a late human pre-40S ribosomal subunit - State A
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S11, 40S ribosomal protein S13, ...
Authors:Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R.
Deposit date:2018-03-28
Release date:2018-06-06
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Visualizing late states of human 40S ribosomal subunit maturation.
Nature, 558, 2018

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