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PDB: 129 件

2RQV
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Solution structure of SH3CI domain of Bem1p
分子名称: Bud emergence protein 1
著者Takaku, T, Ogura, K, Inagaki, F.
登録日2009-12-21
公開日2010-04-21
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of a novel Cdc42-binding module of Bem1 and its interaction with Ste20 and Cdc42
J.Biol.Chem., 285, 2010
2RQW
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Solution structure of Bem1p SH3CI domain complexed with Ste20p-PRR peptide
分子名称: 24-meric peptide from Serine/threonine-protein kinase STE20, Bud emergence protein 1
著者Takaku, T, Ogura, K, Inagaki, F.
登録日2009-12-21
公開日2010-04-21
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of a novel Cdc42-binding module of Bem1 and its interaction with Ste20 and Cdc42
J.Biol.Chem., 285, 2010
2KTR
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NMR structure of p62 PB1 dimer determined based on PCS
分子名称: Sequestosome-1, TERBIUM(III) ION
著者Saio, T, Yokochi, M, Kumeta, H, Inagaki, F.
登録日2010-02-05
公開日2010-04-07
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献PCS-based structure determination of protein-protein complexes
J.Biomol.Nmr, 46, 2010
2RQE
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Solution structure of the silkworm bGRP/GNBP3 N-terminal domain reveals the mechanism for b-1,3-glucan specific recognition
分子名称: Beta-1,3-glucan-binding protein
著者Takahasi, K, Ochiai, M, Horiuchi, M, Kumeta, H, Ogura, K, Ashida, M, Inagaki, F.
登録日2009-04-22
公開日2009-06-23
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the silkworm betaGRP/GNBP3 N-terminal domain reveals the mechanism for beta-1,3-glucan-specific recognition.
Proc.Natl.Acad.Sci.USA, 106, 2009
2KKC
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NMR structure of the p62 PB1 domain
分子名称: Sequestosome-1
著者Yokochi, M, Inagaki, F.
登録日2009-06-18
公開日2009-09-15
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献The NMR structure of the p62 PB1 domain, a key protein in autophagy and NF-kappaB signaling pathway
J.Biomol.Nmr, 45, 2009
2RPV
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Solution Structure of GB1 with LBT probe
分子名称: Immunoglobulin G-binding protein G, LANTHANUM (III) ION
著者Saio, T, Ogura, K, Yokochi, M, Kobashigawa, Y, Inagaki, F.
登録日2008-10-28
公開日2009-09-15
最終更新日2021-11-10
実験手法SOLUTION NMR
主引用文献Two-point anchoring of a lanthanide-binding peptide to a target protein enhances the paramagnetic anisotropic effect
J.Biomol.Nmr, 44, 2009
2KWC
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The NMR structure of the autophagy-related protein Atg8
分子名称: Autophagy-related protein 8
著者Kumeta, H, Watanabe, M, Nakatogawa, H, Yamaguchi, M, Ogura, K, Adachi, W, Fujioka, Y, Noda, N.N, Ohsumi, Y, Inagaki, F.
登録日2010-04-05
公開日2010-05-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The NMR structure of the autophagy-related protein Atg8
J.Biomol.Nmr, 47, 2010
2KSV
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The NMR structure of protein-glutaminase from Chryseobacterium proteolyticum
分子名称: Protein-glutaminase
著者Kumeta, H, Miwa, N, Ogura, K, Kai, Y, Mizukoshi, T, Shimba, N, Suzuki, E, Inagaki, F.
登録日2010-01-14
公開日2010-02-16
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献The NMR structure of protein-glutaminase from Chryseobacterium proteolyticum.
J.Biomol.Nmr, 46, 2010
2KZB
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Solution structure of alpha-mannosidase binding domain of Atg19
分子名称: Autophagy-related protein 19
著者Watanabe, Y, Noda, N, Kumeta, H, Suzuki, K, Ohsumi, Y, Inagaki, F.
登録日2010-06-15
公開日2010-07-21
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Selective transport of alpha-mannosidase by autophagic pathways: structural basis for cargo recognition by Atg19 and Atg34.
J.Biol.Chem., 285, 2010
2RMJ
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BU of 2rmj by Molmil
Solution structure of RIG-I C-terminal domain
分子名称: Probable ATP-dependent RNA helicase DDX58
著者Takahasi, K, Yoneyama, M, Nihishori, T, Hirai, R, Narita, R, Gale Jr, M, Fujita, T, Inagaki, F.
登録日2007-10-23
公開日2008-03-25
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Nonself RNA-Sensing Mechanism of RIG-I Helicase and Activation of Antiviral Immune Responses
Mol.Cell, 29, 2008
2RSE
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NMR structure of FKBP12-mTOR FRB domain-rapamycin complex structure determined based on PCS
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1A, Serine/threonine-protein kinase mTOR, TERBIUM(III) ION
著者Kobashigawa, Y, Ushio, M, Saio, T, Inagaki, F.
登録日2012-01-25
公開日2012-05-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Convenient method for resolving degeneracies due to symmetry of the magnetic susceptibility tensor and its application to pseudo contact shift-based protein-protein complex structure determination.
J.Biomol.Nmr, 53, 2012
2KZK
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Solution structure of alpha-mannosidase binding domain of Atg34
分子名称: Uncharacterized protein YOL083W
著者Watanabe, Y, Noda, N, Kumeta, H, Suzuki, K, Ohsumi, Y, Inagaki, F.
登録日2010-06-18
公開日2010-07-21
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Selective transport of alpha-mannosidase by autophagic pathways: structural basis for cargo recognition by Atg19 and Atg34.
J.Biol.Chem., 285, 2010
2LPU
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Solution structures of KmAtg10
分子名称: KmAtg10
著者Yamaguchi, M, Noda, N.N, Yamamoto, H, Shima, T, Kumeta, H, Kobashigawa, Y, Akada, R, Ohsumi, Y, Inagaki, F.
登録日2012-02-19
公開日2012-08-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural insights into atg10-mediated formation of the autophagy-essential atg12-atg5 conjugate
Structure, 20, 2012
2LI5
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NMR structure of Atg8-Atg7C30 complex
分子名称: Autophagy-related protein 8, Ubiquitin-like modifier-activating enzyme ATG7
著者Kumeta, H, Satoo, K, Noda, N.N, Fujioka, Y, Ogura, K, Nakatogawa, H, Ohsumi, Y, Inagaki, F.
登録日2011-08-23
公開日2011-11-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis of Atg8 activation by a homodimeric E1, Atg7.
Mol.Cell, 44, 2011
2LHH
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Solution structure of Ca2+-bound yCaM
分子名称: CALCIUM ION, Calmodulin
著者Ogura, K, Takahashi, K, Kobashigawa, Y, Yoshida, R, Itoh, H, Yazawa, M, Inagaki, F.
登録日2011-08-10
公開日2012-08-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structures of yeast Saccharomyces cerevisiae calmodulin in calcium- and target peptide-bound states reveal similarities and differences to vertebrate calmodulin.
Genes Cells, 17, 2012
2LHI
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Solution structure of Ca2+/CNA1 peptide-bound yCaM
分子名称: CALCIUM ION, Calmodulin,Serine/threonine-protein phosphatase 2B catalytic subunit A1
著者Ogura, K, Takahashi, K, Kobashigawa, Y, Yoshida, R, Itoh, H, Yazawa, M, Inagaki, F.
登録日2011-08-10
公開日2012-08-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structures of yeast Saccharomyces cerevisiae calmodulin in calcium- and target peptide-bound states reveal similarities and differences to vertebrate calmodulin.
Genes Cells, 17, 2012
2LDR
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BU of 2ldr by Molmil
Solution structure of Helix-RING domain of Cbl-b in the Tyr363 phosphorylated form
分子名称: E3 ubiquitin-protein ligase CBL-B, ZINC ION
著者Kumeta, H, Kobashigawa, Y, Inagaki, F.
登録日2011-06-01
公開日2011-12-14
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Autoinhibition and phosphorylation-induced activation mechanisms of human cancer and autoimmune disease-related E3 protein Cbl-b
Proc.Natl.Acad.Sci.USA, 108, 2011
2M1W
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BU of 2m1w by Molmil
TICAM-2 TIR domain
分子名称: TIR domain-containing adapter molecule 2
著者Enokizono, Y, Kumeta, H, Funami, K, Horiuchi, M, Sarmiento, J, Yamashita, K, Standley, D.M, Matsumoto, M, Seya, T, Inagaki, F.
登録日2012-12-07
公開日2014-01-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structures and interface mapping of the TIR domain-containing adaptor molecules involved in interferon signaling.
Proc.Natl.Acad.Sci.USA, 110, 2013
2M63
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The protease-resistant N-terminal domain of TIR-domain containing adaptor molecule-1, TICAM-1
分子名称: TIR domain-containing adapter molecule 1
著者Kumeta, H, Enokizono, Y, Sakakibara, H, Ogura, K, Matsumoto, M, Seya, T, Inagaki, F.
登録日2013-03-20
公開日2014-03-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The N-terminal domain of TIR domain-containing adaptor molecule-1, TICAM-1.
J.Biomol.Nmr, 58, 2014
2LX2
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1H,13C,15N assignments for an isoform of the type III antifreeze protein from notched-fin eelpout
分子名称: Type III antifreeze protein nfeAFP11
著者Kumeta, H, Ogura, K, Nishimiya, Y, Miura, A, Inagaki, F, Tsuda, S.
登録日2012-08-12
公開日2013-07-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR structure note: a defective isoform and its activity-improved variant of a type III antifreeze protein from Zoarces elongates Kner
J.Biomol.Nmr, 55, 2013
2M1X
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BU of 2m1x by Molmil
TICAM-1 TIR domain structure
分子名称: TIR domain-containing adapter molecule 1
著者Enokizono, Y, Kumeta, H, Funami, K, Horiuchi, M, Sarmiento, J, Yamashita, K, Standley, D.M, Matsumoto, M, Seya, T, Inagaki, F.
登録日2012-12-07
公開日2014-01-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structures and interface mapping of the TIR domain-containing adaptor molecules involved in interferon signaling.
Proc.Natl.Acad.Sci.USA, 110, 2013
2LX3
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BU of 2lx3 by Molmil
1H,13C,15N assignments for an isoform of the type III antifreeze protein from notched-fin eelpout
分子名称: Type III antifreeze protein nfeAFP11
著者Kumeta, H, Ogura, K, Nishimiya, Y, Miura, A, Inagaki, F, Tsuda, S.
登録日2012-08-12
公開日2013-07-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR structure note: a defective isoform and its activity-improved variant of a type III antifreeze protein from Zoarces elongates Kner
J.Biomol.Nmr, 55, 2013
3VGP
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Crystal structure of the C-terminal globular domain of oligosaccharyltransferase (AF_0329) from Archaeoglobus fulgidus
分子名称: Transmembrane oligosaccharyl transferase, putative
著者Matsumoto, S, Igura, M, Nyirenda, J, Yuzawa, S, Noda, N.N, Inagaki, F, Kohda, D.
登録日2011-08-18
公開日2012-07-04
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal Structure of the C-Terminal Globular Domain of Oligosaccharyltransferase from Archaeoglobus fulgidus at 1.75 A Resolution
Biochemistry, 51, 2012
3VH3
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BU of 3vh3 by Molmil
Crystal structure of Atg7CTD-Atg8 complex
分子名称: Autophagy-related protein 8, Ubiquitin-like modifier-activating enzyme ATG7, ZINC ION
著者Noda, N.N, Satoo, K, Inagaki, F.
登録日2011-08-23
公開日2011-09-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of Atg8 activation by a homodimeric E1, Atg7.
Mol.Cell, 44, 2011
3VH4
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Crystal structure of Atg7CTD-Atg8-MgATP complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Autophagy-related protein 8, MAGNESIUM ION, ...
著者Noda, N.N, Satoo, K, Inagaki, F.
登録日2011-08-23
公開日2011-09-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural basis of Atg8 activation by a homodimeric E1, Atg7.
Mol.Cell, 44, 2011

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