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PDB: 9696 results

6T39
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Crystal structure of rsEGFP2 in its off-state determined by SFX
Descriptor: Green fluorescent protein
Authors:Woodhouse, J, Coquelle, N, Adam, V, Barends, T.R.M, De La Mora, E, Bourgeois, D, Colletier, J.P, Schlichting, I, Weik, M.
Deposit date:2019-10-10
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Photoswitching mechanism of a fluorescent protein revealed by time-resolved crystallography and transient absorption spectroscopy.
Nat Commun, 11, 2020
7OD3
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BU of 7od3 by Molmil
SARS CoV-2 Spike protein, Bristol UK Deletion variant, Closed conformation, C3 symmetry
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, LINOLEIC ACID, Spike glycoprotein
Authors:Toelzer, C, Gupta, K, Yadav, S.K.N, Borucu, U, Schaffitzel, C, Berger, I.
Deposit date:2021-04-28
Release date:2022-01-26
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural insights in cell-type specific evolution of intra-host diversity by SARS-CoV-2.
Nat Commun, 13, 2022
1K7F
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CRYSTAL STRUCTURE OF WILD-TYPE TRYPTOPHAN SYNTHASE COMPLEXED WITH N-[1H-INDOL-3-YL-ACETYL]VALINE ACID
Descriptor: N-[1H-INDOL-3-YL-ACETYL]VALINE ACID, PYRIDOXAL-5'-PHOSPHATE, TRYPTOPHAN SYNTHASE ALPHA CHAIN, ...
Authors:Weyand, M, Schlichting, I, Marabotti, A, Mozzarelli, A.
Deposit date:2001-10-19
Release date:2002-07-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of a new class of allosteric effectors complexed to tryptophan synthase.
J.Biol.Chem., 277, 2002
6TC2
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Monoclinic human insulin in complex with p-coumaric acid
Descriptor: 4'-HYDROXYCINNAMIC ACID, Insulin, PHOSPHATE ION, ...
Authors:Triandafillidis, D.-P, Parthenios, N, Spiliopoulou, M, Valmas, A, Kosinas, C, Gozzo, F, Reinle-Schmitt, M, Beckers, D, Degen, T, Pop, M, Fitch, A, Wollenhaupt, J, Weiss, M.S, Karavassili, F, Margiolaki, I.
Deposit date:2019-11-04
Release date:2020-11-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Insulin polymorphism induced by two polyphenols: new crystal forms and advances in macromolecular powder diffraction.
Acta Crystallogr D Struct Biol, 76, 2020
1K8X
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Crystal Structure Of AlphaT183V Mutant Of Tryptophan Synthase From Salmonella Typhimurium
Descriptor: PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, TRYPTOPHAN SYNTHASE, ...
Authors:Kulik, V, Weyand, M, Siedel, R, Niks, D, Arac, D, Dunn, M.F, Schlichting, I.
Deposit date:2001-10-26
Release date:2002-12-18
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:On the Role of AlphaThr183 in the Allosteric Regulation and Catalytic Mechanism of Tryptophan Synthase
J.Mol.Biol., 324, 2002
1K3U
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BU of 1k3u by Molmil
CRYSTAL STRUCTURE OF WILD-TYPE TRYPTOPHAN SYNTHASE COMPLEXED WITH N-[1H-INDOL-3-YL-ACETYL]ASPARTIC ACID
Descriptor: N-[1H-INDOL-3-YL-ACETYL]ASPARTIC ACID, PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, ...
Authors:Weyand, M, Schlichting, I, Marabotti, A, Mozzarelli, A.
Deposit date:2001-10-04
Release date:2002-07-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of a new class of allosteric effectors complexed to tryptophan synthase.
J.Biol.Chem., 277, 2002
6CMQ
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Structure of human SHP2 without N-SH2 domain
Descriptor: Tyrosine-protein phosphatase non-receptor type 11
Authors:Padua, R.A.P, Sun, Y, Marko, I, Pitsawong, W, Kern, D.
Deposit date:2018-03-06
Release date:2018-11-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Mechanism of activating mutations and allosteric drug inhibition of the phosphatase SHP2.
Nat Commun, 9, 2018
1K6H
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Solution Structure of Conserved AGNN Tetraloops: Insights into Rnt1p RNA processing
Descriptor: RNA (5'-R(P*GP*GP*CP*GP*UP*GP*UP*UP*CP*AP*GP*AP*AP*GP*AP*AP*CP*GP*CP*GP*CP*C)-3')
Authors:Lebars, I, Lamontagne, B, Yoshizawa, S, Abou Elela, S, Fourmy, D.
Deposit date:2001-10-16
Release date:2001-12-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of conserved AGNN tetraloops: insights into Rnt1p RNA processing.
EMBO J., 20, 2001
7NUV
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Crystal structure of the Aux2pLS20 tetramerization domain
Descriptor: Aux2pLS20
Authors:Crespo, I, Boer, D.R.
Deposit date:2021-03-14
Release date:2022-03-09
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural and biochemical characterization of the relaxosome auxiliary proteins encoded on the Bacillus subtilis plasmid pLS20.
Comput Struct Biotechnol J, 20, 2022
6T46
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Structure of the Rap conjugation gene regulator of the plasmid pLS20 in complex with the Phr* peptide
Descriptor: CHLORIDE ION, Quorum-sensing secretion protein (processed), Response regulator aspartate phosphatase, ...
Authors:Crespo, I, Bernardo, N, Meijer, W.J.J, Boer, D.R.
Deposit date:2019-10-12
Release date:2020-06-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Inactivation of the dimeric RappLS20 anti-repressor of the conjugation operon is mediated by peptide-induced tetramerization.
Nucleic Acids Res., 48, 2020
6T68
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Crystal structure of Trypanosoma brucei Morn1
Descriptor: CHLORIDE ION, MORN repeat-containing protein 1
Authors:Grishkovskaya, I, Kostan, J, Sajko, S, Morriswood, B, Djinovic-Carugo, K.
Deposit date:2019-10-17
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Structures of three MORN repeat proteins and a re-evaluation of the proposed lipid-binding properties of MORN repeats.
Plos One, 15, 2020
1K3B
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BU of 1k3b by Molmil
Crystal Structure of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added to an Endopeptidase Framework Creates the Machine for Activation of Granular Serine Proteases
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, SULFATE ION, ...
Authors:Turk, D, Janjic, V, Stern, I, Podobnik, M, Lamba, D, Dahl, S.W, Lauritzen, C, Pedersen, J, Turk, V, Turk, B.
Deposit date:2001-10-02
Release date:2002-04-02
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of human dipeptidyl peptidase I (cathepsin C): exclusion domain added to an endopeptidase framework creates the machine for activation of granular serine proteases.
EMBO J., 20, 2001
7NXG
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Wax synthase 1 from Acinetobacter baylyi (AbWSD1) co-crystallized with myristic acid
Descriptor: MYRISTIC ACID, O-acyltransferase WSD
Authors:Vollheyde, K, Kuehnel, K, Lambrecht, F, Kawelke, S, Herrfurth, C, Feussner, I.
Deposit date:2021-03-18
Release date:2022-03-30
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of the Bifunctional Wax Synthase 1 from Acinetobacter baylyi Suggests a Conformational Change upon Substrate Binding and Formation of Additional Substrate Binding Sites
Acs Catalysis, 12, 2022
1K6U
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Crystal Structure of Cyclic Bovine Pancreatic Trypsin Inhibitor
Descriptor: 1,2-ETHANEDIOL, PANCREATIC TRYPSIN INHIBITOR, SULFATE ION
Authors:Botos, I, Wu, Z, Lu, W, Wlodawer, A.
Deposit date:2001-10-17
Release date:2001-12-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1 Å)
Cite:Crystal structure of a cyclic form of bovine pancreatic trypsin inhibitor.
FEBS Lett., 509, 2001
1K7J
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Structural Genomics, protein TF1
Descriptor: Protein yciO, SULFATE ION
Authors:Zhang, R, Dementieva, I, Thorn, J, Donnelly, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2001-10-19
Release date:2002-08-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Genomics, protein TF1
To be Published
6T3A
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BU of 6t3a by Molmil
Difference-refined structure of rsEGFP2 10 ns following 400-nm laser irradiation of the off-state determined by SFX
Descriptor: Green fluorescent protein
Authors:Woodhouse, J, Coquelle, N, Adam, V, Barends, T.R.M, De La Mora, E, Bourgeois, D, Colletier, J.P, Schlichting, I, Weik, M.
Deposit date:2019-10-10
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Photoswitching mechanism of a fluorescent protein revealed by time-resolved crystallography and transient absorption spectroscopy.
Nat Commun, 11, 2020
6T4R
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BU of 6t4r by Molmil
Crystal structure of Trypanosoma brucei Morn1
Descriptor: MORN repeat-containing protein 1
Authors:Grishkovskaya, I, Kostan, J, Sajko, S, Morriswood, B, Djinovic-Carugo, K.
Deposit date:2019-10-14
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.352 Å)
Cite:Structures of three MORN repeat proteins and a re-evaluation of the proposed lipid-binding properties of MORN repeats.
Plos One, 15, 2020
6T6O
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Y201W mutant of the orange carotenoid protein from Synechocystis at pH 4.6
Descriptor: ASPARAGINE, CHLORIDE ION, GLYCEROL, ...
Authors:Sluchanko, N.N, Gushchin, I, Botnarevskiy, V.S, Slonimskiy, Y.B, Remeeva, A, Kovalev, K, Stepanov, A.V, Gordeliy, V, Maksimov, E.G.
Deposit date:2019-10-18
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Role of hydrogen bond alternation and charge transfer states in photoactivation of the Orange Carotenoid Protein.
Commun Biol, 4, 2021
1K3H
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BU of 1k3h by Molmil
NMR Solution Structure of Oxidized Cytochrome c-553 from Bacillus pasteurii
Descriptor: HEME C, cytochrome c-553
Authors:Banci, L, Bertini, I, Ciurli, S, Dikiy, A, Dittmer, J, Rosato, A, Sciara, G, Thompsett, A.R.
Deposit date:2001-10-03
Release date:2001-10-31
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:NMR solution structure, backbone mobility, and homology modeling of c-type cytochromes from gram-positive bacteria.
Chembiochem, 3, 2002
1K3L
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BU of 1k3l by Molmil
Crystal Structure Analysis of S-hexyl-glutathione Complex of Glutathione Transferase at 1.5 Angstroms Resolution
Descriptor: GLUTATHIONE S-TRANSFERASE A1, S-HEXYLGLUTATHIONE
Authors:Le Trong, I, Stenkamp, R.E, Ibarra, C, Atkins, W.M, Adman, E.T.
Deposit date:2001-10-03
Release date:2002-10-23
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:1.3-A resolution structure of human glutathione S-transferase with S-hexyl glutathione bound reveals possible extended ligandin binding site
Proteins, 48, 2002
1K6D
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BU of 1k6d by Molmil
CRYSTAL STRUCTURE OF ACETATE COA-TRANSFERASE ALPHA SUBUNIT
Descriptor: ACETATE COA-TRANSFERASE ALPHA SUBUNIT, MAGNESIUM ION
Authors:Korolev, S, Koroleva, O, Petterson, K, Collart, F, Dementieva, I, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2001-10-15
Release date:2002-06-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Autotracing of Escherichia coli acetate CoA-transferase alpha-subunit structure using 3.4 A MAD and 1.9 A native data.
Acta Crystallogr.,Sect.D, 58, 2002
1KA9
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Imidazole Glycerol Phosphate Synthase
Descriptor: imidazole glycerol phosphate synthase
Authors:Omi, R, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-11-01
Release date:2002-12-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of imidazole glycerol phosphate synthase from Thermus thermophilus HB8: open-closed conformational change and ammonia tunneling.
J.Biochem., 132, 2002
1K3G
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NMR Solution Structure of Oxidized Cytochrome c-553 from Bacillus pasteurii
Descriptor: HEME C, cytochrome c-553
Authors:Banci, L, Bertini, I, Ciurli, S, Dikiy, A, Dittmer, J, Rosato, A, Sciara, G, Thompsett, A.R.
Deposit date:2001-10-03
Release date:2001-10-31
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:NMR solution structure, backbone mobility, and homology modeling of c-type cytochromes from gram-positive bacteria.
Chembiochem, 3, 2002
1K6G
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Solution Structure of Conserved AGNN Tetraloops: Insights into Rnt1p RNA Processing
Descriptor: RNA (5'-R(P*GP*GP*CP*GP*UP*CP*AP*UP*GP*AP*GP*UP*CP*CP*AP*UP*GP*GP*CP*GP*CP*C)-3')
Authors:Lebars, I, Lamontagne, B, Yoshizawa, S, Abou Elela, S, Fourmy, D.
Deposit date:2001-10-16
Release date:2001-12-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of conserved AGNN tetraloops: insights into Rnt1p RNA processing.
EMBO J., 20, 2001
1K40
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crystal structure of the FAT domain of focal adhesion kinase
Descriptor: adhesion kinase
Authors:Hayashi, I, Vuori, K, Liddington, R.C.
Deposit date:2001-10-04
Release date:2002-02-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The focal adhesion targeting (FAT) region of focal adhesion kinase is a four-helix bundle that binds paxillin
Nat.Struct.Biol., 9, 2002

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