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PDB: 17965 results

4CAS
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BU of 4cas by Molmil
Serial femtosecond crystallography structure of a photosynthetic reaction center
Descriptor: (2E,6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-OCTAMETHYLDOTRIACONTA-2,6,10,14,18,22,26,30-OCTAENYL TRIHYDROGEN DIPHOSPHATE, 15-cis-1,2-dihydroneurosporene, BACTERIOCHLOROPHYLL A, ...
Authors:Johansson, L.C, Arnlund, D, Katona, G, White, T.A, Barty, A, DePonte, D.P, Shoeman, R.L, Wickstrand, C, Sharma, A, Williams, G.J, Aquila, A, Bogan, M.J, Caleman, C, Davidsson, J, Doak, R.B, Frank, M, Fromme, R, Galli, L, Grotjohann, I, Hunter, M.S, Kassemeyer, S, Kirian, R.A, Kupitz, C, Liang, M, Lomb, L, Malmerberg, E, Martin, A.V, Messerschmidt, M, Nass, K, Redecke, L, Seibert, M.M, Sjohamn, J, Steinbrener, J, Stellato, F, Wang, D, Wahlgren, W.Y, Weierstall, U, Westenhoff, S, Zatsepin, N.A, Boutet, S, Spence, J.C.H, Schlichting, I, Chapman, H.N, Fromme, P, Neutze, R.
Deposit date:2013-10-09
Release date:2013-12-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of a photosynthetic reaction centre determined by serial femtosecond crystallography.
Nat Commun, 4, 2013
4QKO
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The Crystal Structure of the Pyocin S2 Nuclease Domain, Immunity Protein Complex at 1.8 Angstroms
Descriptor: BROMIDE ION, MAGNESIUM ION, Pyocin-S2, ...
Authors:Grinter, R, Josts, I, Roszak, A.W, Cogdell, C.J, Walker, D.
Deposit date:2014-06-07
Release date:2015-06-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Insights into pyocin S2
To be Published
1M7H
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BU of 1m7h by Molmil
Crystal Structure of APS kinase from Penicillium Chrysogenum: Structure with APS soaked out of one dimer
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-PHOSPHOSULFATE, Adenylylsulfate kinase, ...
Authors:Lansdon, E.B, Sege, I.H, Fisher, A.J.
Deposit date:2002-07-19
Release date:2002-11-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ligand-Induced Structural Changes in Adenosine 5'-Phosphosulfate Kinase from Penicillium chrysogenum.
Biochemistry, 41, 2002
6GEH
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Structure and reactivity of a siderophore-interacting protein from the marine bacterium Shewanella reveals unanticipated functional versatility.
Descriptor: DIMETHYL SULFOXIDE, FAD-binding 9, siderophore-interacting domain protein, ...
Authors:Trindade, I.B, Silva, J.P.M, Matias, P, Moe, E.
Deposit date:2018-04-26
Release date:2018-11-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structure and reactivity of a siderophore-interacting protein from the marine bacteriumShewanellareveals unanticipated functional versatility.
J. Biol. Chem., 294, 2019
2D74
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BU of 2d74 by Molmil
Crystal structure of translation initiation factor aIF2betagamma heterodimer
Descriptor: Translation initiation factor 2 beta subunit, Translation initiation factor 2 gamma subunit, ZINC ION
Authors:Sokabe, M, Yao, M, Sakai, N, Toya, S, Tanaka, I.
Deposit date:2005-11-16
Release date:2006-07-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of archaeal translational initiation factor 2 betagamma-GDP reveals significant conformational change of the beta-subunit and switch 1 region.
Proc.Natl.Acad.Sci.USA, 103, 2006
6GGS
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BU of 6ggs by Molmil
Structure of RIP2 CARD filament
Descriptor: Receptor-interacting serine/threonine-protein kinase 2
Authors:Pellegrini, E, Cusack, S, Desfosses, A, Schoehn, G, Malet, H, Gutsche, I, Sachse, C, Hons, M.
Deposit date:2018-05-03
Release date:2018-10-17
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.94 Å)
Cite:RIP2 filament formation is required for NOD2 dependent NF-kappa B signalling.
Nat Commun, 9, 2018
1RK9
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BU of 1rk9 by Molmil
Solution Structure of Human alpha-Parvalbumin (Minimized Average Structure)
Descriptor: CALCIUM ION, Parvalbumin alpha
Authors:Baig, I, Bertini, I, Del Bianco, C, Gupta, Y.K, Lee, Y.-M, Luchinat, C, Quattrone, A, Structural Proteomics in Europe (SPINE)
Deposit date:2003-11-21
Release date:2004-06-08
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Paramagnetism-based refinement strategy for the solution structure of human alpha-parvalbumin
Biochemistry, 43, 2004
6GN2
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BU of 6gn2 by Molmil
Racemic crystal structure of A-DNA duplex formed from d(CCCGGG) in space group R3
Descriptor: DNA (5'-D(*CP*CP*CP*GP*GP*G)-3'), trimethylamine oxide
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
Deposit date:2018-05-29
Release date:2019-09-11
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Racemic crystal structures of A-DNA duplexes.
Acta Crystallogr D Struct Biol, 78, 2022
4RPI
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BU of 4rpi by Molmil
Crystal Structure of Nicotinate Mononucleotide Adenylyltransferase from Mycobacterium tuberculosis
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DIMETHYL SULFOXIDE, nicotinate-nucleotide adenylyltransferase
Authors:Rodionova, I, Zuccola, H, Sorci, L, Aleshin, A.E, Kazanov, M, Sergienko, E, Rubin, E, Locher, C, Osterman, A.
Deposit date:2014-10-30
Release date:2015-01-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.417 Å)
Cite:Mycobacterial nicotinate mononucleotide adenylyltransferase: structure, mechanism, and implications for drug discovery.
J. Biol. Chem., 290, 2015
3KU3
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BU of 3ku3 by Molmil
Crystal structure of a H2N2 influenza virus hemagglutinin, avian like
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Xu, R, Wilson, I.A.
Deposit date:2009-11-26
Release date:2010-01-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure, receptor binding, and antigenicity of influenza virus hemagglutinins from the 1957 H2N2 pandemic.
J.Virol., 84, 2010
6GHD
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BU of 6ghd by Molmil
Structural analysis of the ternary complex between lamin A/C, BAF and emerin identifies an interface disrupted in autosomal recessive progeroid diseases
Descriptor: 1,2-ETHANEDIOL, Barrier-to-autointegration factor, Emerin, ...
Authors:Samson, C, Petitalot, A, Celli, F, Herrada, I, Ropars, V, Ledu, M.H, Nhiri, N, Arteni, A.A, Buendia, B, ZinnJustin, S.
Deposit date:2018-05-07
Release date:2018-08-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural analysis of the ternary complex between lamin A/C, BAF and emerin identifies an interface disrupted in autosomal recessive progeroid diseases.
Nucleic Acids Res., 46, 2018
4F8Z
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BU of 4f8z by Molmil
Carboxypeptidase T with Boc-Leu
Descriptor: CALCIUM ION, Carboxypeptidase T, GLYCEROL, ...
Authors:Timofeev, V.I, Kuznetsov, S.A, Akparov, V.K, Kuranova, I.P.
Deposit date:2012-05-18
Release date:2013-05-22
Last modified:2015-09-30
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Three-dimensional structure of carboxypeptidase T from Thermoactinomyces vulgaris in complex with N-BOC-L-leucine.
Biochemistry Mosc., 78, 2013
3KSB
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BU of 3ksb by Molmil
Detailed structural insight into the DNA cleavage complex of type IIA topoisomerases (re-sealed form)
Descriptor: 5'-D(*AP*CP*CP*AP*AP*GP*GP*T*CP*AP*TP*GP*AP*AP*TP*GP*AP*CP*TP*AP*TP*GP*CP*AP*CP*GP*TP*AP*AP*AP*AP*CP*AP*G)-3', 5'-D(*CP*TP*GP*TP*TP*TP*TP*A*CP*GP*TP*GP*CP*AP*TP*AP*GP*TP*CP*AP*TP*TP*CP*AP*TP*GP*AP*CP*CP*TP*TP*GP*GP*T)-3', DNA topoisomerase 4 subunit A, ...
Authors:Laponogov, I, Pan, X.-S, Veselkov, D.A, McAuley, K.E, Fisher, L.M, Sanderson, M.R.
Deposit date:2009-11-21
Release date:2010-05-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural Basis of Gate-DNA Breakage and Resealing by Type II Topoisomerases
Plos One, 5, 2010
7EC7
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BU of 7ec7 by Molmil
Crystal structure of SdgB (complexed with phosphate ions)
Descriptor: Glycosyl transferase, group 1 family protein, PHOSPHATE ION
Authors:Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
Deposit date:2021-03-11
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7EC3
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BU of 7ec3 by Molmil
Crystal structure of SdgB (complexed with UDP, GlcNAc, and Glycosylated peptide)
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-35)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-65)]5,6-DIHYDRO-BENZO[H]CINNOLIN-3-YLAMINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycosyl transferase, ...
Authors:Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
Deposit date:2021-03-11
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
3N8N
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BU of 3n8n by Molmil
Crystal structure of 3-dehydroquinate dehydratase from Mycobacterium tuberculosis in complex with inhibitor 6
Descriptor: (1R,4R,5R)-3-(tert-butylcarbamoyl)-1,4,5-trihydroxycyclohex-2-ene-1-carboxylic acid, 3-dehydroquinate dehydratase
Authors:Dias, M.V.B, Snee, W.C, Bromfield, K.M, Payne, R, Palaninathan, S.K, Ciulli, A, Howard, N.I, Abell, C, Sacchettini, J.C, Blundell, T.L.
Deposit date:2010-05-28
Release date:2011-05-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural investigation of inhibitor designs targeting 3-dehydroquinate dehydratase from the shikimate pathway of Mycobacterium tuberculosis.
Biochem.J., 436, 2011
4E1H
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BU of 4e1h by Molmil
Fragment of human prion protein
Descriptor: CITRIC ACID, FE (III) ION, Major prion protein
Authors:Apostol, M.I, Perry, K, Surewicz, W.K.
Deposit date:2012-03-06
Release date:2013-03-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of a human prion protein fragment reveals a motif for oligomer formation.
J.Am.Chem.Soc., 135, 2013
4QNQ
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Crystal Structure Analysis of full-length Bcl-XL in complex with the inhibitor ABT-263
Descriptor: 4-(4-{[2-(4-chlorophenyl)-5,5-dimethylcyclohex-1-en-1-yl]methyl}piperazin-1-yl)-N-[(4-{[(2R)-4-(morpholin-4-yl)-1-(phenylsulfanyl)butan-2-yl]amino}-3-[(trifluoromethyl)sulfonyl]phenyl)sulfonyl]benzamide, Bcl-2-like protein 1
Authors:Korste, A, Vetter, I.R, Stoll, R.
Deposit date:2014-06-18
Release date:2015-10-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure Analysis of full-length Bcl-XL in complex with the inhibitor ABT-263
TO BE PUBLISHED
1OOP
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BU of 1oop by Molmil
The Crystal Structure of Swine Vesicular Disease Virus
Descriptor: Coat protein VP1, Coat protein VP2, Coat protein VP3, ...
Authors:Fry, E.E, Knowles, N.J, Newman, J.W.I, Wilsden, G, Rao, Z, King, A.M.Q, Stuart, D.I.
Deposit date:2003-03-04
Release date:2003-04-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure of Swine Vesicular Disease Virus and Implications for Host Adaptation
J.Virol., 77, 2003
1N4W
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BU of 1n4w by Molmil
ATOMIC RESOLUTION STRUCTURE OF CHOLESTEROL OXIDASE @ pH 7.3 (STREPTOMYCES SP. SA-COO)
Descriptor: Cholesterol oxidase, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Vrielink, A, Lario, P.I.
Deposit date:2002-11-01
Release date:2004-04-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (0.92 Å)
Cite:Atomic resolution crystallography reveals how changes in pH shape the protein microenvironment
Nat.Chem.Biol., 2, 2006
5XLK
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BU of 5xlk by Molmil
Crystal structure of the flagellar cap protein FliD D2-D3 domains from Serratia marcescens in Space group I422
Descriptor: Flagellar hook-associated protein 2, ZINC ION
Authors:Cho, S.Y, Song, W.S, Hong, H.J, Yoon, S.I.
Deposit date:2017-05-10
Release date:2017-06-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Tetrameric structure of the flagellar cap protein FliD from Serratia marcescens.
Biochem. Biophys. Res. Commun., 489, 2017
1N5N
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BU of 1n5n by Molmil
Crystal Structure of Peptide Deformylase from Pseudomonas aeruginosa
Descriptor: GLYCEROL, Peptide deformylase, ZINC ION
Authors:Kreusch, A, Spraggon, G, Lee, C.C, Klock, H, McMullan, D, Ng, K, Shin, T, Vincent, J, Warner, I, Ericson, C, Lesley, S.A.
Deposit date:2002-11-06
Release date:2003-06-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure analysis of peptide deformylases from streptococcus pneumoniae,staphylococcus aureus, thermotoga maritima, and pseudomonas aeruginosa: snapshots of the oxygen sensitivity of peptide deformylase
J.MOL.BIOL., 330, 2003
1XY2
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BU of 1xy2 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF DEAMINO-OXYTOCIN. CONFORMATIONAL FLEXIBILITY AND RECEPTOR BINDING
Descriptor: OXYTOCIN
Authors:Cooper, S, Blundell, T.L, Pitts, J.E, Wood, S.P, Tickle, I.J.
Deposit date:1987-06-05
Release date:1988-04-16
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure analysis of deamino-oxytocin: conformational flexibility and receptor binding.
Science, 232, 1986
3Q1S
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BU of 3q1s by Molmil
HIV-1 neutralizing antibody Z13e1 in complex with epitope display protein
Descriptor: GLYCEROL, ISOPROPYL ALCOHOL, Interleukin-22, ...
Authors:Stanfield, R.L, Julien, J.-P, Pejchal, R, Gach, J.S, Zwick, M.B, Wilson, I.A.
Deposit date:2010-12-17
Release date:2011-11-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure-Based Design of a Protein Immunogen that Displays an HIV-1 gp41 Neutralizing Epitope.
J.Mol.Biol., 414, 2011
1RUI
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RHINOVIRUS 14 MUTANT S1223G COMPLEXED WITH ANTIVIRAL COMPOUND WIN 52084
Descriptor: 5-(7-(5-HYDRO-4-METHYL-2-OXAZOLYL)PHENOXY)HEPTYL)-3-METHYL ISOXAZOLE, RHINOVIRUS 14
Authors:Hadfield, A, Oliveira, M.A, Kim, K.H, Minor, I, Kremer, M.J, Heinz, B.A, Shepard, D, Pevear, D.C, Rueckert, R.R, Rossmann, M.G.
Deposit date:1995-06-09
Release date:1995-11-14
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural studies on human rhinovirus 14 drug-resistant compensation mutants.
J.Mol.Biol., 253, 1995

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