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PDB: 17801 results

3GVP
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Human SAHH-like domain of human adenosylhomocysteinase 3
Descriptor: Adenosylhomocysteinase 3, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Siponen, M.I, Wisniewska, M, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Karlberg, T, Kotenyova, T, Lehtio, L, Moche, M, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Schutz, P, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Schueler, H.
Deposit date:2009-03-31
Release date:2009-06-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Human S-adenosyl homocysteine hydrolase-like 2 protein crystal structure
To be Published
5N1T
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Crystal structure of complex between flavocytochrome c and copper chaperone CopC from T. paradoxus
Descriptor: COPPER (II) ION, CopC, Cytochrome C, ...
Authors:Osipov, E.M, Lilina, A.V, Tikhonova, T.V, Tsallagov, S.I, Popov, V.O.
Deposit date:2017-02-06
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the flavocytochrome c sulfide dehydrogenase associated with the copper-binding protein CopC from the haloalkaliphilic sulfur-oxidizing bacterium Thioalkalivibrio paradoxusARh 1.
Acta Crystallogr D Struct Biol, 74, 2018
1SQN
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Progesterone Receptor Ligand Binding Domain with bound Norethindrone
Descriptor: (14beta,17alpha)-17-ethynyl-17-hydroxyestr-4-en-3-one, progesterone receptor
Authors:Williams, S.P, Madauss, K.P, Deng, J.-S, Austin, R.J.H, Lambert, M.H, McLay, I, Pritchard, J, Short, S.A, Stewart, E.L, Uings, I.J.
Deposit date:2004-03-19
Release date:2004-07-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:Progesterone receptor ligand binding pocket flexibility: crystal structures of the norethindrone and mometasone furoate complexes
J.Med.Chem., 47, 2004
1IQP
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Crystal Structure of the Clamp Loader Small Subunit from Pyrococcus furiosus
Descriptor: ADENOSINE-5'-DIPHOSPHATE, RFCS
Authors:Oyama, T, Ishino, Y, Cann, I.K.O, Ishino, S, Morikawa, K.
Deposit date:2001-07-24
Release date:2001-09-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Atomic Structure of the Clamp Loader Small Subunit from Pyrococcus furiosus
Mol.Cell, 8, 2001
6T48
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BU of 6t48 by Molmil
Bovine enterovirus F3 in complex with glutathione and a Cysteinylglycine dipeptide
Descriptor: CHLORIDE ION, CYSTEINE, GLUTATHIONE, ...
Authors:Duyvesteyn, H.M.E, Ren, J, Walter, T.S, Fry, E.E, Stuart, D.I.
Deposit date:2019-10-12
Release date:2020-01-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Glutathione facilitates enterovirus assembly by binding at a druggable pocket.
Commun Biol, 3, 2020
7QE0
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BU of 7qe0 by Molmil
80S-bound human SKI complex in the open state
Descriptor: Helicase SKI2W, RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')
Authors:Koegel, A, Keidel, A, Bonneau, F, Schaefer, I.B, Conti, E.
Deposit date:2021-12-01
Release date:2022-02-09
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:The human SKI complex regulates channeling of ribosome-bound RNA to the exosome via an intrinsic gatekeeping mechanism.
Mol.Cell, 82, 2022
6T4R
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BU of 6t4r by Molmil
Crystal structure of Trypanosoma brucei Morn1
Descriptor: MORN repeat-containing protein 1
Authors:Grishkovskaya, I, Kostan, J, Sajko, S, Morriswood, B, Djinovic-Carugo, K.
Deposit date:2019-10-14
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.352 Å)
Cite:Structures of three MORN repeat proteins and a re-evaluation of the proposed lipid-binding properties of MORN repeats.
Plos One, 15, 2020
7QDZ
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80S-bound human SKI complex in the closed state
Descriptor: Helicase SKI2W, RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3'), Tetratricopeptide repeat protein 37, ...
Authors:Koegel, A, Keidel, A, Bonneau, F, Schaefer, I.B, Conti, E.
Deposit date:2021-12-01
Release date:2022-02-09
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The human SKI complex regulates channeling of ribosome-bound RNA to the exosome via an intrinsic gatekeeping mechanism.
Mol.Cell, 82, 2022
6JF7
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BU of 6jf7 by Molmil
K3U bound crystal structure of class I type b peptide deformylase from Acinetobacter baumannii
Descriptor: Peptide deformylase, S-(2-oxo-2-phenylethyl) (2R)-2-benzyl-4,4,4-trifluorobutanethioate, ZINC ION
Authors:Jung, K.H, Ho, T.H, Lee, I.H, Kang, L.W.
Deposit date:2019-02-08
Release date:2020-02-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:K3U bound crystal structure of class I type b peptide deformylase from Acinetobacter baumannii
To be published
7QDS
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BU of 7qds by Molmil
Apo human SKI complex in the open state
Descriptor: Helicase SKI2W, Tetratricopeptide repeat protein 37, WD repeat-containing protein 61
Authors:Koegel, A, Keidel, A, Bonneau, A, Schaefer, I.B, Conti, E.
Deposit date:2021-11-30
Release date:2022-02-02
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The human SKI complex regulates channeling of ribosome-bound RNA to the exosome via an intrinsic gatekeeping mechanism.
Mol.Cell, 82, 2022
7QDR
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BU of 7qdr by Molmil
Apo human SKI complex in the closed state
Descriptor: Helicase SKI2W, Tetratricopeptide repeat protein 37, WD repeat-containing protein 61
Authors:Koegel, A, Keidel, A, Bonneau, F, Schaefer, I.B, Conti, E.
Deposit date:2021-11-29
Release date:2022-02-02
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:The human SKI complex regulates channeling of ribosome-bound RNA to the exosome via an intrinsic gatekeeping mechanism.
Mol.Cell, 82, 2022
1J0D
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BU of 1j0d by Molmil
ACC deaminase mutant complexed with ACC
Descriptor: 1-aminocyclopropane-1-carboxylate deaminase, N-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-Y-LMETHYL]-1-AMINO-CYCLOPROPANECARBOXYLIC ACID
Authors:Ose, T, Fujino, A, Yao, M, Honma, M, Tanaka, I.
Deposit date:2002-11-12
Release date:2003-05-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Reaction intermediate structures of 1-aminocyclopropane-1-carboxylate deaminase: insight into PLP-dependent cyclopropane ring-opening reaction
J.BIOL.CHEM., 278, 2003
7Q9U
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BU of 7q9u by Molmil
Crystal structure of the high affinity KRas mutant PDE6D complex
Descriptor: 1,2-ETHANEDIOL, FARNESYL, GTPase KRas, ...
Authors:Yelland, T, Ismail, I.
Deposit date:2021-11-14
Release date:2022-01-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.238 Å)
Cite:Stabilization of the RAS:PDE6D Complex Is a Novel Strategy to Inhibit RAS Signaling.
J.Med.Chem., 65, 2022
7QDY
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BU of 7qdy by Molmil
RNA-bound human SKI complex
Descriptor: Helicase SKI2W, RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3'), Tetratricopeptide repeat protein 37, ...
Authors:Koegel, A, Keidel, A, Bonneau, F, Schaefer, I.B, Conti, E.
Deposit date:2021-12-01
Release date:2022-02-09
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The human SKI complex regulates channeling of ribosome-bound RNA to the exosome via an intrinsic gatekeeping mechanism.
Mol.Cell, 82, 2022
6TQ0
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BU of 6tq0 by Molmil
Crystal structure of the human Arc N-lobe bound to repeat peptide 5 from GKAP
Descriptor: Activity-regulated cytoskeleton-associated protein, repeat peptide 5 from GKAP
Authors:Hallin, E.I, Bramham, C.R, Kursula, P.
Deposit date:2019-12-15
Release date:2021-01-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural properties and peptide ligand binding of the capsid homology domains of human Arc.
Biochem Biophys Rep, 26, 2021
2HUR
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BU of 2hur by Molmil
Escherichia coli nucleoside diphosphate kinase
Descriptor: NUCLEOSIDE DIPHOSPHATE KINASE, SULFATE ION
Authors:Moynie, L, Giraud, M.-F, Georgescauld, F, Lascu, I, Dautant, A.
Deposit date:2006-07-27
Release date:2007-04-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:The structure of the Escherichia coli nucleoside diphosphate kinase reveals a new quaternary architecture for this enzyme family
Proteins, 67, 2007
6Q2V
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BU of 6q2v by Molmil
Crystal structure of SPOC domain of human PHD-finger protein 3 (PHF3)
Descriptor: GLYCEROL, PHD finger protein 3
Authors:Grishkovskaya, I, Slade, D, Djinovic-Carugo, K.
Deposit date:2018-12-03
Release date:2020-07-15
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.594 Å)
Cite:PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC
Nat Commun, 12, 2021
4F86
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BU of 4f86 by Molmil
Structure analysis of Geranyl diphosphate methyltransferase in complex with GPP and sinefungin
Descriptor: GERANYL DIPHOSPHATE, Geranyl diphosphate 2-C-methyltransferase, MAGNESIUM ION, ...
Authors:Ariyawutthiphan, O, Ose, T, Minami, A, Gao, Y.G, Yao, M, Oikawa, H, Tanaka, I.
Deposit date:2012-05-17
Release date:2012-10-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure analysis of geranyl pyrophosphate methyltransferase and the proposed reaction mechanism of SAM-dependent C-methylation
Acta Crystallogr.,Sect.D, 68, 2012
2BN0
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Banana Lectin bound to Laminaribiose
Descriptor: CADMIUM ION, RIPENING-ASSOCIATED PROTEIN, SULFATE ION, ...
Authors:Meagher, J.L, Winter, H.C, Ezell, P, Goldstein, I.J, Stuckey, J.A.
Deposit date:2005-03-17
Release date:2005-06-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of Banana Lectin Reveals a Novel Second Sugar Binding Site.
Glycobiology, 15, 2005
5N69
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BU of 5n69 by Molmil
Cardiac muscle myosin S1 fragment in the pre-powerstroke state co-crystallized with the activator Omecamtiv Mecarbil
Descriptor: 3,3',3''-phosphanetriyltripropanoic acid, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
Authors:Planelles-Herrero, V.J, Hartman, J.J, Robert-Paganin, J, Malik, F.I, Houdusse, A.
Deposit date:2017-02-14
Release date:2017-08-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Mechanistic and structural basis for activation of cardiac myosin force production by omecamtiv mecarbil.
Nat Commun, 8, 2017
6PZG
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BU of 6pzg by Molmil
Crystal structure of human NA-80 Fab
Descriptor: NA-80 Fab heavy chain, NA-80 Fab light chain
Authors:Zhu, X, Wilson, I.A.
Deposit date:2019-07-31
Release date:2019-12-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Structural Basis of Protection against H7N9 Influenza Virus by Human Anti-N9 Neuraminidase Antibodies.
Cell Host Microbe, 26, 2019
2BTV
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BU of 2btv by Molmil
ATOMIC MODEL FOR BLUETONGUE VIRUS (BTV) CORE
Descriptor: PROTEIN (VP3 CORE PROTEIN), PROTEIN (VP7 CORE PROTEIN)
Authors:Grimes, J.M, Burroughs, J.N, Gouet, P, Diprose, J.M, Malby, R, Zientras, S, Mertens, P.P.C, Stuart, D.I.
Deposit date:1998-09-05
Release date:1998-09-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The atomic structure of the bluetongue virus core.
Nature, 395, 1998
6JF5
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BU of 6jf5 by Molmil
K2U bound crystal structure of class I type b peptide deformylase from Acinetobacter baumannii
Descriptor: (3~{R},4~{R})-4-oxidanyl-3-(phenylmethyl)-4-(phenylmethylsulfanyl)butanoic acid, Peptide deformylase, ZINC ION
Authors:Lee, I.H, Ho, T.H, Kang, L.W.
Deposit date:2019-02-08
Release date:2020-02-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:K2U bound crystal structure of class I type b peptide deformylase from Acinetobacter baumannii
To be published
6Q23
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BU of 6q23 by Molmil
Crystal structure of human 1G01 Fab in complex with influenza virus neuraminidase from A/California/04/2009 (H1N1)
Descriptor: 1G01 Fab IgG1 heavy chain, 1G01 Fab kappa light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhu, X, Wilson, I.A.
Deposit date:2019-08-06
Release date:2019-10-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.27 Å)
Cite:Broadly protective human antibodies that target the active site of influenza virus neuraminidase.
Science, 366, 2019
2C58
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BU of 2c58 by Molmil
Torpedo californica acetylcholinesterase in complex with 20mM acetylthiocholine
Descriptor: 2-(TRIMETHYLAMMONIUM)ETHYL THIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINESTERASE, ...
Authors:Colletier, J.P, Fournier, D, Greenblatt, H.M, Sussman, J.L, Zaccai, G, Silman, I, Weik, M.
Deposit date:2005-10-26
Release date:2006-06-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Insights Into Substrate Traffic and Inhibition in Acetylcholinesterase.
Embo J., 25, 2006

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