Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17801 results

5EBM
DownloadVisualize
BU of 5ebm by Molmil
KcsA T75G mutant in the nonconductive state
Descriptor: Antibody Fab Fragment Light Chain, DIACYL GLYCEROL, NONAN-1-OL, ...
Authors:Matulef, K, Valiyaveetil, F.I.
Deposit date:2015-10-19
Release date:2016-04-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Individual Ion Binding Sites in the K(+) Channel Play Distinct Roles in C-type Inactivation and in Recovery from Inactivation.
Structure, 24, 2016
4RN5
DownloadVisualize
BU of 4rn5 by Molmil
B1 domain of human Neuropilin-1 with acetate ion in a ligand-binding site
Descriptor: ACETATE ION, GLYCEROL, Neuropilin-1, ...
Authors:Allerston, C.K, Yelland, T.S, Jarvis, A, Jenkins, K, Winfield, N, Cheng, L, Jia, H, Zachary, I, Selwood, D.L, Djordjevic, S.
Deposit date:2014-10-23
Release date:2015-10-28
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Conserved water molecules in a ligand-binding site of neuropilin-1
To be Published
2IFB
DownloadVisualize
BU of 2ifb by Molmil
CRYSTAL STRUCTURE OF RAT INTESTINAL FATTY-ACID-BINDING PROTEIN. REFINEMENT AND ANALYSIS OF THE ESCHERICHIA COLI-DRIVED PROTEIN WITH BOUND PALMITATE
Descriptor: INTESTINAL FATTY ACID BINDING PROTEIN, PALMITIC ACID
Authors:Sacchettini, J.C, Gordon, J.I, Banaszak, L.J.
Deposit date:1990-12-05
Release date:1992-01-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of rat intestinal fatty-acid-binding protein. Refinement and analysis of the Escherichia coli-derived protein with bound palmitate.
J.Mol.Biol., 208, 1989
1VDV
DownloadVisualize
BU of 1vdv by Molmil
Bovine Milk Xanthine Dehydrogenase Y-700 Bound Form
Descriptor: 1-[3-CYANO-4-(NEOPENTYLOXY)PHENYL]-1H-PYRAZOLE-4-CARBOXYLIC ACID, ACETIC ACID, CALCIUM ION, ...
Authors:Fukunari, A, Okamoto, K, Nishino, T, Eger, B.T, Pai, E.F, Kamezawa, M, Yamada, I, Kato, N.
Deposit date:2004-03-25
Release date:2004-12-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Y-700 [1-[3-Cyano-4-(2,2-dimethylpropoxy)phenyl]-1H-pyrazole-4-carboxylic acid]: a potent xanthine oxidoreductase inhibitor with hepatic excretion
J.Pharmacol.Exp.Ther., 311, 2004
2V76
DownloadVisualize
BU of 2v76 by Molmil
Crystal structure of the human dok1 PTB domain
Descriptor: 1,2-ETHANEDIOL, DOCKING PROTEIN 1, GLYCEROL, ...
Authors:Oxley, C.L, Anthis, N.J, Lowe, E.D, Campbell, I.D, Wegener, K.L.
Deposit date:2007-07-26
Release date:2008-01-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:An Integrin Phosphorylation Switch: The Effect of {Beta}3 Integrin Tail Phosphorylation on Dok1 and Talin Binding.
J.Biol.Chem., 283, 2008
8BH5
DownloadVisualize
BU of 8bh5 by Molmil
SARS-CoV-2 BA.2.12.1 RBD in complex with Beta-27 Fab and C1 nanobody
Descriptor: Beta-27 heavy chain, Beta-27 light chain, GLYCEROL, ...
Authors:Huo, J, Zhou, D, Ren, J, Stuart, D.I.
Deposit date:2022-10-29
Release date:2022-11-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Humoral responses against SARS-CoV-2 Omicron BA.2.11, BA.2.12.1 and BA.2.13 from vaccine and BA.1 serum.
Cell Discov, 8, 2022
5VCD
DownloadVisualize
BU of 5vcd by Molmil
Crystal structure of the cysteine depleted CYP3A4 bound to glycerol
Descriptor: Cytochrome P450 3A4, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sevrioukova, I.
Deposit date:2017-03-31
Release date:2017-05-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:High-Level Production and Properties of the Cysteine-Depleted Cytochrome P450 3A4.
Biochemistry, 56, 2017
5E7S
DownloadVisualize
BU of 5e7s by Molmil
Hexameric structure of a LonA protease domain in active state
Descriptor: Lon protease
Authors:Lin, C.-C, Su, S.-C, Chang, C.-I.
Deposit date:2015-10-13
Release date:2016-03-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Structural Basis for the Magnesium-Dependent Activation and Hexamerization of the Lon AAA+ Protease
Structure, 24, 2016
3DM1
DownloadVisualize
BU of 3dm1 by Molmil
Crystal structure of the complex of human chromobox homolog 3 (CBX3) with peptide
Descriptor: Chromobox protein homolog 3, Histone-lysine N-methyltransferase, H3 lysine-9 specific 3
Authors:Amaya, M.F, Ravichandran, M, Loppnau, P, Kozieradzki, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Bountra, C, Bochkarev, A, Min, J, Ouyang, H, Structural Genomics Consortium (SGC)
Deposit date:2008-06-30
Release date:2008-08-19
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of the chromodomain of Cbx3 bound to methylated peptides from histone h1 and G9a.
Plos One, 7, 2012
3FVT
DownloadVisualize
BU of 3fvt by Molmil
Crystal Structure of Acetyl Xylan Esterase from Bacillus pumilus, monoclinic crystal form II
Descriptor: Acetyl xylan esterase, CHLORIDE ION, GLYCEROL
Authors:Krastanova, I, Cassetta, A, Lamba, D.
Deposit date:2009-01-16
Release date:2010-01-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and functional studies of Bacillus pumilus acetyl xylan esterase
To be Published
7Q16
DownloadVisualize
BU of 7q16 by Molmil
Human 14-3-3 zeta fused to the BAD peptide including phosphoserine-74
Descriptor: 14-3-3 protein zeta/delta,Bcl2-associated agonist of cell death
Authors:Sluchanko, N.N, Tugaeva, K.V, Gushchin, I, Remeeva, A, Kovalev, K, Cooley, R.B.
Deposit date:2021-10-18
Release date:2021-11-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.356 Å)
Cite:Crystal structure of human 14-3-3 zeta complexed with the noncanonical phosphopeptide from proapoptotic BAD.
Biochem.Biophys.Res.Commun., 583, 2021
5L16
DownloadVisualize
BU of 5l16 by Molmil
Crystal Structure of N-terminus truncated selenophosphate synthetase from Leishmania major
Descriptor: Putative selenophosphate synthetase, SULFATE ION
Authors:Faim, L.M, Silva, I.R, Pereira, H.M, Dias, M.B, Silva, M.T.A, Brandao-Neto, J, Thiemann, O.H.
Deposit date:2016-07-28
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.882 Å)
Cite:Trypanosomatid selenophosphate synthetase structure, function and interaction with selenocysteine lyase.
Plos Negl Trop Dis, 14, 2020
1VE0
DownloadVisualize
BU of 1ve0 by Molmil
Crystal structure of uncharacterized protein ST2072 from Sulfolobus tokodaii
Descriptor: SULFATE ION, ZINC ION, hypothetical protein (ST2072)
Authors:Tanabe, E, Horiike, Y, Tsumoto, K, Yasutake, Y, Yao, M, Tanaka, I, Kumagai, I.
Deposit date:2004-03-26
Release date:2005-03-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the uncharacterized protein ST2072 from Sulfolobus tokodaii
To be Published
1JNP
DownloadVisualize
BU of 1jnp by Molmil
Crystal Structure of Murine Tcl1 at 2.5 Resolution
Descriptor: T-CELL LEUKEMIA/LYMPHOMA PROTEIN 1A
Authors:Petock, J.M, Torshin, I.Y, Wang, Y.F, DuBois, G.C, Croce, C.M, Harrison, R.W, Weber, I.T.
Deposit date:2001-07-24
Release date:2001-11-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of murine Tcl1 at 2.5 A resolution and implications for the TCL oncogene family.
Acta Crystallogr.,Sect.D, 57, 2001
6HL5
DownloadVisualize
BU of 6hl5 by Molmil
Factor Inhibiting HIF (FIH) in complex with zinc, NOG and ASPP1(932-954)
Descriptor: Apoptosis-stimulating of p53 protein 1, GLYCEROL, Hypoxia-inducible factor 1-alpha inhibitor, ...
Authors:Leissing, T.M, Chowdhury, R, Clifton, I.J, Lu, X, Schofield, C.J.
Deposit date:2018-09-10
Release date:2019-10-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Factor Inhibiting HIF (FIH) in complex with zinc, NOG and ASPP1(932-954)
To Be Published
1W6P
DownloadVisualize
BU of 1w6p by Molmil
X-RAY CRYSTAL STRUCTURE OF C2S HUMAN GALECTIN-1 COMPLEXED WITH N- Acetyl-LACTOSAMINE
Descriptor: BETA-MERCAPTOETHANOL, GALECTIN-1, SULFATE ION, ...
Authors:Lopez-Lucendo, M.I.F, Gabius, H.J, Romero, A.
Deposit date:2004-08-20
Release date:2004-10-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Growth-Regulatory Human Galectin-1: Crystallographic Characterisation of the Structural Changes Induced by Single-Site Mutations and Their Impact on the Thermodynamics of Ligand Binding
J.Mol.Biol., 343, 2004
6HND
DownloadVisualize
BU of 6hnd by Molmil
Crystal structure of the aromatic aminotransferase Aro9 from C. Albicans
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Aromatic-amino-acid:2-oxoglutarate transaminase, POTASSIUM ION, ...
Authors:Kiliszek, A, Rzad, K, Rypniewski, W, Milewski, S, Gabriel, I.
Deposit date:2018-09-14
Release date:2019-02-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Crystal structures of aminotransferases Aro8 and Aro9 from Candida albicans and structural insights into their properties.
J.Struct.Biol., 205, 2019
6HNV
DownloadVisualize
BU of 6hnv by Molmil
Crystal structure of aminotransferase Aro9 from C. Albicans with ligands
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINOHEXANEDIOIC ACID, 2-OXOADIPIC ACID, ...
Authors:Kiliszek, A, Rzad, K, Rypniewski, W, Milewski, S, Gabriel, I.
Deposit date:2018-09-17
Release date:2019-02-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of aminotransferases Aro8 and Aro9 from Candida albicans and structural insights into their properties.
J.Struct.Biol., 205, 2019
8BD4
DownloadVisualize
BU of 8bd4 by Molmil
TniQ-capped Tns-ATP-dsDNA complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(P*GP*AP*TP*CP*GP*AP*TP*CP*GP*AP*TP*CP*GP*AP*TP*C)-3'), MAGNESIUM ION, ...
Authors:Querques, I, Schmitz, M, Oberli, S, Chanez, C, Jinek, M.
Deposit date:2022-10-18
Release date:2022-12-28
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Structural basis for the assembly of the type V CRISPR-associated transposon complex.
Cell, 185, 2022
6E7G
DownloadVisualize
BU of 6e7g by Molmil
Crystal structure of H5 hemagglutinin mutant Y161A from A/Viet Nam/1203/2004 H5N1 influenza virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, ...
Authors:Tzarum, N, Wilson, I.A.
Deposit date:2018-07-26
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.094 Å)
Cite:N-Glycolylneuraminic Acid as a Receptor for Influenza A Viruses.
Cell Rep, 27, 2019
3MDM
DownloadVisualize
BU of 3mdm by Molmil
Thioperamide complex of Cytochrome P450 46A1
Descriptor: Cholesterol 24-hydroxylase, N-cyclohexyl-4-(1H-imidazol-5-yl)piperidine-1-carbothioamide, PROTOPORPHYRIN IX CONTAINING FE
Authors:Mast, N, Charvet, C, Pikuleva, I, Stout, C.D.
Deposit date:2010-03-30
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis of drug binding to CYP46A1, an enzyme that controls cholesterol turnover in the brain.
J.Biol.Chem., 285, 2010
4RWR
DownloadVisualize
BU of 4rwr by Molmil
2.1 Angstrom Crystal Structure of Stage II Sporulation Protein D from Bacillus anthracis
Descriptor: Stage II sporulation protein D
Authors:Minasov, G, Wawrzak, Z, Nocadello, S, Shuvalova, L, Dubrovska, I, Flores, K, Bagnoli, F, Falugi, F, Bottomley, M, Grandi, G, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-12-05
Release date:2014-12-17
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of the SpoIID Lytic Transglycosylases Essential for Bacterial Sporulation.
J.Biol.Chem., 291, 2016
2IPI
DownloadVisualize
BU of 2ipi by Molmil
Crystal Structure of Aclacinomycin Oxidoreductase
Descriptor: Aclacinomycin oxidoreductase (AknOx), FLAVIN-ADENINE DINUCLEOTIDE, METHYL (2S,4R)-2-ETHYL-2,5,7-TRIHYDROXY-6,11-DIOXO-4-{[2,3,6-TRIDEOXY-4-O-{2,6-DIDEOXY-4-O-[(2S,6S)-6-METHYL-5-OXOTETRAHYDRO-2H-PYRAN-2-YL]-ALPHA-D-LYXO-HEXOPYRANOSYL}-3-(DIMETHYLAMINO)-D-RIBO-HEXOPYRANOSYL]OXY}-1,2,3,4,6,11-HEXAHYDROTETRACENE-1-CARBOXYLATE
Authors:Sultana, A, Kursula, I, Schneider, G, Alexeev, I, Niemi, J, Mantsala, P.
Deposit date:2006-10-12
Release date:2007-01-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure determination by multiwavelength anomalous diffraction of aclacinomycin oxidoreductase: indications of multidomain pseudomerohedral twinning.
Acta Crystallogr.,Sect.D, 63, 2007
6HUE
DownloadVisualize
BU of 6hue by Molmil
ParkinS65N
Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase parkin, GLYCEROL, ...
Authors:McWilliams, T.G, Barini, E, Pohjolan-Pirhonen, R, Brooks, S.P, Singh, F, Burel, S, Balk, K, Kumar, A, Montava-Garriga, L, Prescott, A.R, Hassoun, S.M, Mouton-Liger, F, Ball, G, Hills, R, Knebel, A, Ulusoy, A, Di Monte, D.A, Tamjar, J, Antico, O, Fears, K, Smith, L, Brambilla, R, Palin, E, Valori, M, Eerola-Rautio, J, Tienari, P, Corti, O, Dunnett, S.B, Ganley, I.G, Suomalainen, A, Muqit, M.M.K.
Deposit date:2018-10-07
Release date:2018-10-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Phosphorylation of Parkin at serine 65 is essential for its activation in vivo .
Open Biology, 8, 2018
7PS7
DownloadVisualize
BU of 7ps7 by Molmil
Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-40 Fab
Descriptor: Beta-40 Fab light chain, Beta-40 heavy chain, Spike protein S1
Authors:Zhou, D, Ren, J, Stuart, D.I.
Deposit date:2021-09-22
Release date:2021-12-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:The antibody response to SARS-CoV-2 Beta underscores the antigenic distance to other variants.
Cell Host Microbe, 30, 2022

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon