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PDB: 17801 results

4GXU
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BU of 4gxu by Molmil
Crystal structure of antibody 1F1 bound to the 1918 influenza hemagglutinin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody 1F1, heavy chain, ...
Authors:Ekiert, D.C, Wilson, I.A.
Deposit date:2012-09-04
Release date:2012-12-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.294 Å)
Cite:Influenza Human Monoclonal Antibody 1F1 Interacts with Three Major Antigenic Sites and Residues Mediating Human Receptor Specificity in H1N1 Viruses.
Plos Pathog., 8, 2012
4BKT
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BU of 4bkt by Molmil
von Hippel Lindau protein:ElonginB:ElonginC complex, in complex with (2S,4R)-N-methyl-1-[2-(3-methyl-1,2-oxazol-5-yl)ethanoyl]-4-oxidanyl-pyrrolidine-2-carboxamide
Descriptor: (2S,4R)-N-methyl-1-[2-(3-methyl-1,2-oxazol-5-yl)ethanoyl]-4-oxidanyl-pyrrolidine-2-carboxamide, ARGININE, GLUTAMIC ACID, ...
Authors:Van Molle, I, Dias, D.M, Baud, M, Galdeano, C, Geraldes, C.F.G.C, Ciulli, A.
Deposit date:2013-04-29
Release date:2013-11-27
Last modified:2017-07-12
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Is NMR Fragment Screening Fine-Tuned to Assess Druggability of Protein-Protein Interactions?
Acs Med.Chem.Lett., 5, 2014
5SY8
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BU of 5sy8 by Molmil
Crystal structure of the complex of 10E8 Fab light chain mutant1 and T117v2 HIV-1 MPER scaffold
Descriptor: 10E8 EPITOPE SCAFFOLD T117v2, 10E8 FAB HEAVY CHAIN, 10E8 FAB LIGHT CHAIN, ...
Authors:Irimia, A, Wilson, I.A.
Deposit date:2016-08-10
Release date:2017-03-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Lipid interactions and angle of approach to the HIV-1 viral membrane of broadly neutralizing antibody 10E8: Insights for vaccine and therapeutic design.
PLoS Pathog., 13, 2017
6EI6
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BU of 6ei6 by Molmil
CC2D1B coordinates ESRCT-III activity during the mitotic reformation of the nuclear envelope
Descriptor: Coiled-coil and C2 domain-containing protein 1-like, DI(HYDROXYETHYL)ETHER, SULFATE ION
Authors:Ventimiglia, L.N, Cuesta-Geijo, M.A, Martinelli, N, Caballe, A, Macheboeuf, P, Miguet, N, Parnham, I.M, Olmos, Y, Carlton, J.G, Weissehorn, W, martin-Serrano, J.
Deposit date:2017-09-18
Release date:2018-10-10
Last modified:2018-12-19
Method:X-RAY DIFFRACTION (2.461 Å)
Cite:CC2D1B Coordinates ESCRT-III Activity during the Mitotic Reformation of the Nuclear Envelope.
Dev. Cell, 47, 2018
1EX0
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BU of 1ex0 by Molmil
HUMAN FACTOR XIII, MUTANT W279F ZYMOGEN
Descriptor: CALCIUM ION, COAGULATION FACTOR XIII A CHAIN, PHOSPHATE ION, ...
Authors:Garzon, R.J, Pratt, K.P, Bishop, P.D, Le Trong, I, Stenkamp, R.E, Teller, D.C.
Deposit date:2000-04-28
Release date:2003-12-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Tryptophan 279 is Essential for the Transglutaminase Activity of Coagulation Factor XIII: Functional and Structural Characterization
To be Published
5T5B
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BU of 5t5b by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX OF 10E8 FAB LIGHT CHAIN MUTANT5 AND T117V2 HIV-1 MPER SCAFFOLD
Descriptor: 10E8 EPITOPE SCAFFOLD T117V2, Antibody 10E8 FAB HEAVY CHAIN, Antibody 10E8 FAB LIGHT CHAIN MUTATED, ...
Authors:Irimia, A, Wilson, I.A.
Deposit date:2016-08-30
Release date:2017-03-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Lipid interactions and angle of approach to the HIV-1 viral membrane of broadly neutralizing antibody 10E8: Insights for vaccine and therapeutic design.
PLoS Pathog., 13, 2017
2W75
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BU of 2w75 by Molmil
Structures of P. aeruginosa FpvA bound to heterologous pyoverdines: Apo-FpvA
Descriptor: 3,6,9,12,15-PENTAOXATRICOSAN-1-OL, FERRIPYOVERDINE RECEPTOR, PHOSPHATE ION
Authors:Greenwald, J, Nader, M, Celia, H, Gruffaz, C, Meyer, J.-M, Schalk, I.J, Pattus, F.
Deposit date:2008-12-20
Release date:2009-05-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Fpva Bound to Non-Cognate Pyoverdines: Molecular Basis of Siderophore Recognition by an Iron Transporter.
Mol.Microbiol., 72, 2009
6EP7
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BU of 6ep7 by Molmil
ARABIDOPSIS THALIANA GSTU23, GSH bound
Descriptor: GLUTATHIONE, GLYCEROL, Glutathione S-transferase U23, ...
Authors:Tossounian, M.A, Van Molle, I, Wahni, K, Jacques, S, Vertommen, D, Gevaert, K, Van Breusegem, F, Young, D, Rosado, L, Messens, J.
Deposit date:2017-10-11
Release date:2018-04-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.947 Å)
Cite:Disulfide bond formation protects Arabidopsis thaliana glutathione transferase tau 23 from oxidative damage.
Biochim. Biophys. Acta, 1862, 2018
1KDL
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BU of 1kdl by Molmil
Solution structure of the amphipathic domain of YopD from Yersinia
Descriptor: YOPD protein
Authors:Tengel, T, Sethson, I, Francis, M.S.
Deposit date:2001-11-13
Release date:2002-08-21
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Conformational analysis by CD and NMR spectroscopy of a peptide encompassing the amphipathic domain of YopD from Yersinia.
Eur.J.Biochem., 269, 2002
1P2Q
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BU of 1p2q by Molmil
Structural consequences of accommodation of four non-cognate amino-acid residues in the S1 pocket of bovine trypsin and chymotrypsin
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Chymotrypsinogen A, Pancreatic trypsin inhibitor, ...
Authors:Helland, R, Czapinska, H, Leiros, I, Olufsen, M, Otlewski, J, Smalaas, A.O.
Deposit date:2003-04-15
Release date:2004-04-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural consequences of accommodation of four non-cognate amino acid residues in the S1 pocket of bovine trypsin and chymotrypsin.
J.Mol.Biol., 333, 2003
4BKS
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BU of 4bks by Molmil
von Hippel Lindau protein:ElonginB:ElonginC complex, in complex with (2S,4R)-1-ethanoyl-N-[[4-(1,3-oxazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide
Descriptor: (2S,4R)-1-ethanoyl-N-[[4-(1,3-oxazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, ACETATE ION, TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1, ...
Authors:Van Molle, I, Dias, D.M, Baud, M, Galdeano, C, Geraldes, C.F.G.C, Ciulli, A.
Deposit date:2013-04-29
Release date:2013-11-27
Last modified:2014-01-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Is NMR Fragment Screening Fine-Tuned to Assess Druggability of Protein-Protein Interactions?
Acs Med.Chem.Lett., 5, 2014
1P4R
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BU of 1p4r by Molmil
Crystal Structure of Human ATIC in complex with folate-based inhibitor BW1540U88UD
Descriptor: AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE, Bifunctional purine biosynthesis protein PURH, N-[(S)-(4-{[(2-AMINO-4-HYDROXYQUINAZOLIN-6-YL)(DIHYDROXY)-LAMBDA~4~-SULFANYL]AMINO}PHENYL)(HYDROXY)METHYL]-L-GLUTAMIC ACID, ...
Authors:Cheong, C.-G, Greasley, S.E, Horton, P.A, Beardsley, G.P, Wilson, I.A.
Deposit date:2003-04-23
Release date:2004-03-30
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structures of human bifunctional enzyme aminoimidazole-4-carboxamide ribonucleotide transformylase/IMP cyclohydrolase in complex with potent sulfonyl-containing antifolates
J.Biol.Chem., 279, 2004
5AJO
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BU of 5ajo by Molmil
Crystal structure of the inactive form of GalNAc-T2 in complex with the glycopeptide MUC5AC-3,13
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, MUCIN, POLYPEPTIDE N-ACETYLGALACTOSAMINYLTRANSFERASE 2, ...
Authors:Lira-Navarrete, E, delasRivas, M, Companon, I, Pallares, M.C, Kong, Y, Iglesias-Fernandez, J, Bernardes, G.J.L, Peregrina, J.M, Rovira, C, Bernado, P, Bruscolini, P, Clausen, H, Lostao, A, Corzana, F, Hurtado-Guerrero, R.
Deposit date:2015-02-26
Release date:2015-03-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Dynamic Interplay between Catalytic and Lectin Domains of Galnac-Transferases Modulates Protein O-Glycosylation.
Nat.Commun., 6, 2015
2VPQ
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BU of 2vpq by Molmil
Crystal structure of biotin carboxylase from S. aureus complexed with AMPPNP
Descriptor: ACETYL-COA CARBOXYLASE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Mochalkin, I.
Deposit date:2008-03-03
Release date:2008-09-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Evidence for Substrate-Induced Synergism and Half-Sites Reactivity in Biotin Carboxylase.
Protein Sci., 17, 2008
6ESJ
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BU of 6esj by Molmil
Human butyrylcholinesterase in complex with propidium
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3,8-DIAMINO-5[3-(DIETHYLMETHYLAMMONIO)PROPYL]-6-PHENYLPHENANTHRIDINIUM, ...
Authors:Nachon, F, Brazzolotto, X, Wandhammer, M, Trovaslet-Leroy, M, Macdonald, I.R, Darvesh, S, Rosenberry, T.L.
Deposit date:2017-10-20
Release date:2017-12-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.979845 Å)
Cite:Comparison of the Binding of Reversible Inhibitors to Human Butyrylcholinesterase and Acetylcholinesterase: A Crystallographic, Kinetic and Calorimetric Study.
Molecules, 22, 2017
4BL0
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BU of 4bl0 by Molmil
Crystal structure of yeast Bub3-Bub1 bound to phospho-Spc105
Descriptor: CELL CYCLE ARREST PROTEIN BUB3, CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1, MAGNESIUM ION, ...
Authors:Primorac, I, Weir, J.R, Musacchio, A.
Deposit date:2013-04-30
Release date:2013-09-18
Last modified:2013-10-09
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Bub3 Reads Phosphorylated Melt Repeats to Promote Spindle Assembly Checkpoint Signaling
Elife, 2, 2013
1EG2
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BU of 1eg2 by Molmil
CRYSTAL STRUCTURE OF RHODOBACTER SPHEROIDES (N6 ADENOSINE) METHYLTRANSFERASE (M.RSRI)
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, MODIFICATION METHYLASE RSRI
Authors:Scavetta, R.D, Thomas, C.B, Walsh, M.A, Szegedi, S, Joachimiak, A, Gumport, R.I, Churchill, M.E.A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2000-02-11
Release date:2000-10-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of RsrI methyltransferase, a member of the N6-adenine beta class of DNA methyltransferases.
Nucleic Acids Res., 28, 2000
1KWW
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BU of 1kww by Molmil
Rat mannose protein A complexed with a-Me-Fuc.
Descriptor: CALCIUM ION, CHLORIDE ION, MANNOSE-BINDING PROTEIN A, ...
Authors:Ng, K.K, Kolatkar, A.R, Park-Snyder, S, Feinberg, H, Clark, D.A, Drickamer, K, Weis, W.I.
Deposit date:2002-01-30
Release date:2002-07-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Orientation of bound ligands in mannose-binding proteins. Implications for multivalent ligand recognition.
J.Biol.Chem., 277, 2002
1KX1
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BU of 1kx1 by Molmil
Rat mannose protein A complexed with Man6-GlcNAc2-Asn
Descriptor: CALCIUM ION, MANNOSE-BINDING PROTEIN A, alpha-D-mannopyranose, ...
Authors:Ng, K.K, Kolatkar, A.R, Park-Snyder, S, Feinberg, H, Clark, D.A, Drickamer, K, Weis, W.I.
Deposit date:2002-01-30
Release date:2002-07-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Orientation of bound ligands in mannose-binding proteins. Implications for multivalent ligand recognition.
J.Biol.Chem., 277, 2002
6EYD
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BU of 6eyd by Molmil
Structure of Mycobacterium smegmatis RNA polymerase Sigma-A holoenzyme
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Kouba, T, Barvik, I, Krasny, L.
Deposit date:2017-11-11
Release date:2018-12-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.22 Å)
Cite:The Core and Holoenzyme Forms of RNA Polymerase fromMycobacterium smegmatis.
J. Bacteriol., 201, 2019
1KWU
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BU of 1kwu by Molmil
Rat mannose binding protein A complexed with a-Me-Man
Descriptor: CALCIUM ION, CHLORIDE ION, MANNOSE-BINDING PROTEIN A, ...
Authors:Ng, K.K, Kolatkar, A.R, Park-Snyder, S, Feinberg, H, Clark, D.A, Drickamer, K, Weis, W.I.
Deposit date:2002-01-30
Release date:2002-07-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Orientation of bound ligands in mannose-binding proteins. Implications for multivalent ligand recognition.
J.Biol.Chem., 277, 2002
3N59
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BU of 3n59 by Molmil
Type II dehydroquinase from Mycobacterium Tuberculosis complexed with 3-dehydroshikimate
Descriptor: (4S,5R)-4,5-dihydroxy-3-oxocyclohex-1-ene-1-carboxylic acid, 3-dehydroquinate dehydratase, CHLORIDE ION
Authors:Snee, W.C, Palaninathan, S.K, Sacchettini, J.C, Dias, M.V.B, Bromfield, K.M, Payne, R, Ciulli, A, Howard, N.I, Abell, C, Blundell, T.L, TB Structural Genomics Consortium (TBSGC)
Deposit date:2010-05-24
Release date:2010-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Structural investigation of inhibitor designs targeting 3-dehydroquinate dehydratase from the shikimate pathway of Mycobacterium tuberculosis.
Biochem.J., 436, 2011
6DCV
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BU of 6dcv by Molmil
Crystal structure of human anti-tau antibody CBTAU-27.1
Descriptor: GLYCEROL, Light chain of CBTAU27.1 Fab, heavy chain of CBTAU-27.1 Fab
Authors:Zhu, X, Zhang, H, Wilson, I.A.
Deposit date:2018-05-08
Release date:2018-06-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A common antigenic motif recognized by naturally occurring human VH5-51/VL4-1 anti-tau antibodies with distinct functionalities.
Acta Neuropathol Commun, 6, 2018
1KQV
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BU of 1kqv by Molmil
Family of NMR Solution Structures of Ca Ln Calbindin D9K
Descriptor: LANTHANUM (III) ION, VITAMIN D-DEPENDENT CALCIUM-BINDING PROTEIN
Authors:Bertini, I, Donaire, A, Jimenez, B, Luchinat, C, Parigi, G, Piccioli, M, Poggi, L.
Deposit date:2002-01-08
Release date:2002-01-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Paramagnetism-based versus classical constraints: an analysis of the solution structure of Ca Ln calbindin D9k.
J.Biomol.NMR, 21, 2001
2W16
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BU of 2w16 by Molmil
Structures of FpvA bound to heterologous pyoverdines
Descriptor: (1S)-1-CARBOXY-5-[(3-CARBOXYPROPANOYL)AMINO]-8,9-DIHYDROXY-1,2,3,4-TETRAHYDROPYRIMIDO[1,2-A]QUINOLIN-11-IUM, 3,6,9,12,15-PENTAOXATRICOSAN-1-OL, DSN-ARG-DSN-FHO-LYS-FHO-THR-THR, ...
Authors:Greenwald, J, Nader, M, Celia, H, Gruffaz, C, Meyer, J.-M, Schalk, I.J, Pattus, F.
Deposit date:2008-10-14
Release date:2009-05-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Fpva Bound to Non-Cognate Pyoverdines: Molecular Basis of Siderophore Recognition by an Iron Transporter.
Mol.Microbiol., 72, 2009

223532

数据于2024-08-07公开中

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