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PDB: 17801 results

6H5Q
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Cryo-EM structure of in vitro assembled Measles virus N into nucleocapsid-like particles (NCLPs) bound to polyA RNA hexamers.
Descriptor: Nucleocapsid, RNA (5'-R(*AP*AP*AP*AP*AP*A)-3')
Authors:Desfosses, A, Milles, S, Ringkjobing Jensen, M, Guseva, S, Colletier, J, Maurin, D, Schoehn, G, Gutsche, I, Ruigrok, R, Blackledge, M.
Deposit date:2018-07-25
Release date:2019-03-13
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Assembly and cryo-EM structures of RNA-specific measles virus nucleocapsids provide mechanistic insight into paramyxoviral replication.
Proc.Natl.Acad.Sci.USA, 116, 2019
5L94
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BU of 5l94 by Molmil
The 2.25 A crystal structure of CYP109E1 from Bacillus megaterium in complex with testosterone
Descriptor: Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE, TESTOSTERONE
Authors:Jozwik, I.K, Thunnissen, A.M.W.H.
Deposit date:2016-06-09
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis of steroid binding and oxidation by the cytochrome P450 CYP109E1 from Bacillus megaterium.
Febs J., 283, 2016
1R53
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BU of 1r53 by Molmil
Crystal structure of the bifunctional chorismate synthase from Saccharomyces cerevisiae
Descriptor: Chorismate synthase
Authors:Quevillon-Cheruel, S, Leulliot, N, Meyer, P, Graille, M, Bremang, M, Blondeau, K, Sorel, I, Poupon, A, Janin, J, van Tilbeurgh, H.
Deposit date:2003-10-09
Release date:2003-12-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the bifunctional chorismate synthase from Saccharomyces cerevisiae
J.Biol.Chem., 279, 2004
2XSM
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BU of 2xsm by Molmil
Crystal structure of the mammalian cytosolic chaperonin CCT in complex with tubulin
Descriptor: CCT
Authors:Munoz, I.G, Yebenes, H, Zhou, M, Mesa, P, Serna, M, Bragado-Nilsson, E, Beloso, A, Robinson, C.V, Valpuesta, J.M, Montoya, G.
Deposit date:2010-10-29
Release date:2010-12-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (5.5 Å)
Cite:Crystal Structure of the Open Conformation of the Mammalian Chaperonin Cct in Complex with Tubulin.
Nat.Struct.Mol.Biol., 18, 2011
6HQI
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BU of 6hqi by Molmil
holo-form of polyphenol oxidase from Solanum lycopersicum
Descriptor: COPPER (II) ION, OXYGEN ATOM, Polyphenol oxidase A, ...
Authors:Kampatsikas, I, Bijelic, A, Rompel, A.
Deposit date:2018-09-25
Release date:2019-03-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Biochemical and structural characterization of tomato polyphenol oxidases provide novel insights into their substrate specificity.
Sci Rep, 9, 2019
1RJT
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BU of 1rjt by Molmil
NMR Structure of CXC Chemokine CXCL11/ITAC
Descriptor: Small inducible cytokine B11
Authors:Booth, V, Clark-Lewis, I, Sykes, B.D.
Deposit date:2003-11-20
Release date:2004-04-13
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:NMR structure of CXCR3 binding chemokine CXCL11 (ITAC).
Protein Sci., 13, 2004
6HR0
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BU of 6hr0 by Molmil
Optimizing electroactive organisms: the effect of orthologous proteins
Descriptor: Cytochrome C, HEME C, PHOSPHITE ION
Authors:Trindade, I.B, Moe, E, Matias, P.
Deposit date:2018-09-26
Release date:2019-10-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Optimizing electroactive organisms: the effect of orthologous proteins
Frontiers in Energy Research, 2019
2XYB
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BU of 2xyb by Molmil
CRYSTAL STRUCTURE OF A FULLY FUNCTIONAL LACCASE FROM THE LIGNINOLYTIC FUNGUS PYCNOPORUS CINNABARINUS
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
Authors:Piontek, K, Choinowski, T, Antorini, M, Herpoel-Gimbert, I, Plattner, D.A, Sigoillot, J.C, Asther, M, Winterhalter, K.
Deposit date:2010-11-17
Release date:2011-11-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Substrate Binding and Copper Geometry in Laccases
To be Published
4JRM
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BU of 4jrm by Molmil
Crystal structure of beta-ketoacyl-ACP synthase II (FabF) from Vibrio Cholerae (space group P212121) at 1.75 Angstrom
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 2, ACETATE ION, GLYCEROL
Authors:Hou, J, Chruszcz, M, Shabalin, I.G, Zheng, H, Cooper, D.R, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-03-21
Release date:2013-04-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of beta-ketoacyl-ACP synthase II (FabF) from Vibrio cholerae (space group P43) at 2.2 Angstrom
To be Published
6KYC
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BU of 6kyc by Molmil
Structure of the S207A mutant of Clostridium difficile sortase B
Descriptor: Putative peptidase C60B, sortase B
Authors:Kang, C.Y, Huang, I.H, Wu, T.Y, Chang, J.C, Hsiao, Y.Y, Cheng, C.H, Tsai, W.J, Hsu, K.C, Wang, S.Y.
Deposit date:2019-09-17
Release date:2020-02-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:Functional analysis ofClostridium difficilesortase B reveals key residues for catalytic activity and substrate specificity.
J.Biol.Chem., 295, 2020
5VKX
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BU of 5vkx by Molmil
Coordination Chemistry within a Protein Host: Regulation of the Secondary Coordination Sphere
Descriptor: COPPER (II) ION, GLYCEROL, Streptavidin, ...
Authors:Mann, S.I, Heinisch, T.
Deposit date:2017-04-24
Release date:2018-04-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Coordination chemistry within a protein host: regulation of the secondary coordination sphere.
Chem. Commun. (Camb.), 54, 2018
5KUX
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BU of 5kux by Molmil
Designed influenza hemagglutinin binding protein HSB.2
Descriptor: Designed influenza inhibitor protein HSB.2
Authors:Lee, P.S, Bernard, S.M, Wilson, I.A.
Deposit date:2016-07-13
Release date:2017-06-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Computational design of trimeric influenza-neutralizing proteins targeting the hemagglutinin receptor binding site.
Nat. Biotechnol., 35, 2017
4JY6
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BU of 4jy6 by Molmil
Crystal structure of human Fab PGT123, a broadly reactive and potent HIV-1 neutralizing antibody
Descriptor: GLYCEROL, PGT123 heavy chain, PGT123 light chain, ...
Authors:Julien, J.-P, Diwanji, D.C, Burton, D.R, Wilson, I.A.
Deposit date:2013-03-29
Release date:2013-05-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Broadly Neutralizing Antibody PGT121 Allosterically Modulates CD4 Binding via Recognition of the HIV-1 gp120 V3 Base and Multiple Surrounding Glycans.
Plos Pathog., 9, 2013
4JO6
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BU of 4jo6 by Molmil
Streptavidin complex with SBP-Tag
Descriptor: SBP-Tag, Streptavidin
Authors:Barrette-Ng, I.H, Wu, S.C, Tjia, W.M, Wong, S.L, Ng, K.K.S.
Deposit date:2013-03-17
Release date:2013-05-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The structure of the SBP-Tag-streptavidin complex reveals a novel helical scaffold bridging binding pockets on separate subunits
Acta Crystallogr.,Sect.D, 69, 2013
3P64
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BU of 3p64 by Molmil
Time-dependent and Protein-directed In Situ Growth of Gold Nanoparticles in a Single Crystal of Lysozyme
Descriptor: CHLORIDE ION, GOLD 3+ ION, GOLD ION, ...
Authors:Wei, H, Wang, Z, Zhang, J, House, S, Gao, Y.-G, Yang, L, Robinson, H, Tan, L.H, Xing, H, Hou, C, Robertson, I.M, Zuo, J.-M, Lu, Y.
Deposit date:2010-10-11
Release date:2011-02-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Time-dependent, protein-directed growth of gold nanoparticles within a single crystal of lysozyme.
Nat Nanotechnol, 6, 2011
3HRU
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BU of 3hru by Molmil
Crystal Structure of ScaR with bound Zn2+
Descriptor: Metalloregulator ScaR, SULFATE ION, ZINC ION
Authors:Stoll, K.E, Draper, W.E, Kliegman, J.I, Golynskiy, M.V, Brew-Appiah, R.A.T, Brown, H.K, Breyer, W.A, Jakubovics, N.S, Jenkinson, H.F, Brennan, R.B, Cohen, S.M, Glasfeld, A.
Deposit date:2009-06-09
Release date:2009-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Characterization and structure of the manganese-responsive transcriptional regulator ScaR.
Biochemistry, 48, 2009
8AZG
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BU of 8azg by Molmil
Crystal structure of MreB from Geobacillus stearothermophilus ATCC7953 in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell shape-determining protein MreB, GLYCEROL
Authors:Li de la Sierra-Gallay, I, Mao, W.
Deposit date:2022-09-06
Release date:2023-09-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:On the role of nucleotides and lipids in the polymerization of the actin homolog MreB from a Gram-positive bacterium.
Elife, 12, 2023
8AC8
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BU of 8ac8 by Molmil
The nucleoprotein complex of Rep protein with DUE ssDNA
Descriptor: DNA (5'-D(*AP*TP*TP*TP*TP*TP*AP*TP*A)-3'), Replication initiation protein
Authors:Nowacka, M, Wegrzyn, K, Oliwa, M, Konieczny, I.
Deposit date:2022-07-05
Release date:2023-09-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Rep protein accommodates together dsDNA and ssDNA which enables a loop-back mechanism to plasmid DNA replication initiation.
Nucleic Acids Res., 51, 2023
4DFG
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BU of 4dfg by Molmil
Crystal Structure of Wild-type HIV-1 Protease with Cyclopentyltetrahydro- furanyl Urethanes as P2-ligand, GRL-0249A
Descriptor: CHLORIDE ION, Protease, SODIUM ION, ...
Authors:Wang, Y.-F, Agniswamy, J, Weber, I.T.
Deposit date:2012-01-23
Release date:2012-03-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Substituent effects on P2-cyclopentyltetrahydrofuranyl urethanes: Design, synthesis, and X-ray studies of potent HIV-1 protease inhibitors.
Bioorg.Med.Chem.Lett., 22, 2012
4DGY
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BU of 4dgy by Molmil
Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the broadly neutralizing antibody HCV1, C2 form
Descriptor: CHLORIDE ION, E2 peptide, GLYCEROL, ...
Authors:Kong, L, Wilson, I.A, Law, M.
Deposit date:2012-01-27
Release date:2012-05-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Structural basis of hepatitis C virus neutralization by broadly neutralizing antibody HCV1.
Proc.Natl.Acad.Sci.USA, 109, 2012
5KTI
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BU of 5kti by Molmil
Structure of cow mincle complexed with KMJ1
Descriptor: 2,3-dimethoxybenzoic acid, CALCIUM ION, TRIETHYLENE GLYCOL, ...
Authors:Feinberg, H, Rambaruth, N.D.S, Jegouzo, S.A.F, Jacobsen, K.M, Djurhuus, R, Poulsen, T.B, Taylor, M.E, Drickamer, K, Weis, W.I.
Deposit date:2016-07-11
Release date:2016-08-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Binding Sites for Acylated Trehalose Analogs of Glycolipid Ligands on an Extended Carbohydrate Recognition Domain of the Macrophage Receptor Mincle.
J.Biol.Chem., 291, 2016
6H3B
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BU of 6h3b by Molmil
Lysozyme: Machining protein microcrystals for structure determination by electron diffraction
Descriptor: CHLORIDE ION, Lysozyme C
Authors:Duyvesteyn, H.M.E, Ginn, H.M, Stuart, D.I.
Deposit date:2018-07-18
Release date:2018-09-12
Last modified:2022-03-30
Method:ELECTRON CRYSTALLOGRAPHY (1.9 Å)
Cite:Machining protein microcrystals for structure determination by electron diffraction.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1W87
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BU of 1w87 by Molmil
FERREDOXIN-NADP REDUCTASE (MUTATION: Y 303 W) COMPLEXED WITH NADP BY COCRYSTALLIZATION
Descriptor: FERREDOXIN-NADP REDUCTASE, FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Hermoso, J.A, Perez-Dorado, I, Maya, C.
Deposit date:2004-09-16
Release date:2005-10-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:C-Terminal Tyrosine of Ferredoxin-Nadp(+) Reductase in Hydride Transfer Processes with Nad(P)(+)/H.
Biochemistry, 44, 2005
2Y3D
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BU of 2y3d by Molmil
Zn-bound form of Cupriavidus metallidurans CH34 CnrXs
Descriptor: CHLORIDE ION, NICKEL AND COBALT RESISTANCE PROTEIN CNRR, ZINC ION
Authors:Trepreau, J, Girard, E, Maillard, A.P, de Rosny, E, Petit-Haertlein, I, Kahn, R, Coves, J.
Deposit date:2010-12-20
Release date:2011-03-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis for Metal Sensing by Cnrx.
J.Mol.Biol., 408, 2011
8AP5
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BU of 8ap5 by Molmil
Cadmium-loaded form of Caenorhabditis elegans MTL-2
Descriptor: CADMIUM ION, Metallothionein-2
Authors:Leszczyszyn, O.I, Sturzenbaum, S.R, Blindauer, C.A.
Deposit date:2022-08-09
Release date:2024-01-17
Method:SOLUTION NMR
Cite:Juggling cadmium detoxification and zinc homeostasis: A division of labour between the two C. elegans metallothioneins.
Chemosphere, 350, 2023

223532

건을2024-08-07부터공개중

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