Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17801 件

2Y0E
DownloadVisualize
BU of 2y0e by Molmil
BceC and the final step of UGDs reaction
分子名称: ACETATE ION, GLYCEROL, SULFATE ION, ...
著者Rocha, J, Popescu, A.O, Borges, P, Mil-Homens, D, Sa-Correia, I, Fialho, A.M, Frazao, C.
登録日2010-12-02
公開日2011-07-27
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure of Burkholderia Cepacia Udp-Glucose Dehydrogenase (Ugd) Bcec and Role of Tyr10 in Final Hydrolysis of Ugd Thioester Intermediate.
J.Bacteriol., 193, 2011
4Z2Q
DownloadVisualize
BU of 4z2q by Molmil
The crystal structure of Sclerotium Rolfsii lectin variant 1 (SSR1) in complex with N-acetyl-glucosamine
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-alpha-D-glucopyranose, ...
著者Kantsadi, A.L, Peppa, V.I, Leonidas, D.D.
登録日2015-03-30
公開日2015-07-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular Cloning, Carbohydrate Specificity and the Crystal Structure of Two Sclerotium rolfsii Lectin Variants.
Molecules, 20, 2015
7Q72
DownloadVisualize
BU of 7q72 by Molmil
Structure of Pla1 in complex with Red1
分子名称: NURS complex subunit red1, Poly(A) polymerase pla1
著者Soni, K, Wild, K, Sinning, I.
登録日2021-11-09
公開日2022-12-07
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Mechanistic insights into RNA surveillance by the canonical poly(A) polymerase Pla1 of the MTREC complex.
Nat Commun, 14, 2023
7QC5
DownloadVisualize
BU of 7qc5 by Molmil
Crystal structure of human wild type transthyretin in complex with (3,4-dihydroxy-5-nitrophenyl)-(3-fluoro-5-hydroxyphenyl)methanone compound
分子名称: (3-fluoranyl-5-oxidanyl-phenyl)-[3-nitro-4,5-bis(oxidanyl)phenyl]methanone, Transthyretin
著者Varejao, N, Pinheiro, F, Pallares, I, Ventura, S, Reverter, D.
登録日2021-11-22
公開日2022-11-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Development of a Highly Potent Transthyretin Amyloidogenesis Inhibitor: Design, Synthesis, and Evaluation.
J.Med.Chem., 65, 2022
4Z4I
DownloadVisualize
BU of 4z4i by Molmil
Human Argonaute2 A481T Mutant Bound to t1-G Target RNA
分子名称: MAGNESIUM ION, PHENOL, Protein argonaute-2, ...
著者Schirle, N.T, MacRae, I.J.
登録日2015-04-02
公開日2015-09-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献Water-mediated recognition of t1-adenosine anchors Argonaute2 to microRNA targets.
Elife, 4, 2015
7Q73
DownloadVisualize
BU of 7q73 by Molmil
Structure of Pla1 apo
分子名称: GLYCEROL, Poly(A) polymerase pla1
著者Soni, K, Wild, K, Sinning, I.
登録日2021-11-09
公開日2022-12-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanistic insights into RNA surveillance by the canonical poly(A) polymerase Pla1 of the MTREC complex.
Nat Commun, 14, 2023
7Q74
DownloadVisualize
BU of 7q74 by Molmil
Structure of Pla1 apo, with a C-terminal deletion
分子名称: Poly(A) polymerase pla1
著者Soni, K, Wild, K, Sinning, I.
登録日2021-11-09
公開日2022-12-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.599 Å)
主引用文献Mechanistic insights into RNA surveillance by the canonical poly(A) polymerase Pla1 of the MTREC complex.
Nat Commun, 14, 2023
8IYF
DownloadVisualize
BU of 8iyf by Molmil
Structure of VldE-H182A in complex with GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, Validamine 7-phosphate valienyltransferase
著者Wong, C.P, Mori, T, Mahmud, T, Abe, I.
登録日2023-04-04
公開日2024-04-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of VldE-H182A in complex with GDP
To Be Published
4Z50
DownloadVisualize
BU of 4z50 by Molmil
Crystal Structure of Multidrug Resistant HIV-1 Protease Clinical Isolate PR20D25N with Tucked Flap
分子名称: CHLORIDE ION, GLYCEROL, Protease, ...
著者Agniswamy, J, Shen, C.-H, Weber, I.T.
登録日2015-04-02
公開日2015-10-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Conformational variation of an extreme drug resistant mutant of HIV protease.
J.Mol.Graph.Model., 62, 2015
7QEC
DownloadVisualize
BU of 7qec by Molmil
Crystal structure of SlpA - domain II, domain that is involved in the self-assembly of the S-layer from Lactobacillus amylovorus
分子名称: S-layer
著者Eder, M, Dordic, A, Millan, C, Sagmeister, T, Uson, I, Pavkov-Keller, T.
登録日2021-12-02
公開日2022-12-14
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The molecular architecture of Lactobacillus S-layer: Assembly and attachment to teichoic acids.
Proc.Natl.Acad.Sci.USA, 121, 2024
6ZL1
DownloadVisualize
BU of 6zl1 by Molmil
Crystal structure of human serum albumin in complex with the MCL-1 neutralizing Alphabody CMPX-383B
分子名称: Albumin, CMPX-383B
著者Pannecoucke, E, Savvides, S.N, Desmet, J, Lasters, I.
登録日2020-06-30
公開日2021-04-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.272 Å)
主引用文献Cell-penetrating Alphabody protein scaffolds for intracellular drug targeting.
Sci Adv, 7, 2021
8IYT
DownloadVisualize
BU of 8iyt by Molmil
Crystal Structure of Serine Palmitoyltransferase complexed with D-methylserine
分子名称: (2~{R})-2-methyl-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]-3-oxidanyl-propanoic acid, 1,2-ETHANEDIOL, Serine palmitoyltransferase
著者Takahashi, A, Murakami, T, Katayama, A, Miyahara, I, Kamiya, N, Ikushiro, H, Yano, T.
登録日2023-04-06
公開日2024-04-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of Serine Palmitoyltransferase from Sphingobacterium multivorum
To Be Published
6ZK7
DownloadVisualize
BU of 6zk7 by Molmil
Crystal Structure of human PYROXD1/FAD complex
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1
著者Meinhart, A, Asanovic, I, Martinez, J, Clausen, T.
登録日2020-06-30
公開日2021-05-12
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The oxidoreductase PYROXD1 uses NAD(P) + as an antioxidant to sustain tRNA ligase activity in pre-tRNA splicing and unfolded protein response.
Mol.Cell, 81, 2021
8IYE
DownloadVisualize
BU of 8iye by Molmil
Structure of VldE-D158N in complex with GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, Validamine 7-phosphate valienyltransferase
著者Wong, C.P, Mori, T, Mahmud, T, Abe, I.
登録日2023-04-04
公開日2024-04-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of VldE-D158N in complex with GDP
To Be Published
3QF6
DownloadVisualize
BU of 3qf6 by Molmil
Neutron structure of type-III Antifreeze Protein allows the reconstruction of AFP-ice interface
分子名称: Type-3 ice-structuring protein HPLC 12
著者Howard, E.I, Blakeley, M.P, Haertlein, M, Petit-Haertlein, I, Mitschler, A, Fisher, S.J, Cousido-Siah, A, Salvay, A.G, Popov, A, Muller-Dieckmann, C, Petrova, T, Podjarny, A.
登録日2011-01-21
公開日2011-06-22
最終更新日2024-03-20
実験手法NEUTRON DIFFRACTION (1.85 Å)
主引用文献Neutron structure of type-III antifreeze protein allows the reconstruction of AFP-ice interface.
J.Mol.Recognit., 24, 2011
8J5E
DownloadVisualize
BU of 8j5e by Molmil
Crystal structure of kinase AbmG in complex with 4'-thiocytidine
分子名称: 4-azanyl-1-[(2~{R},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)thiolan-2-yl]pyrimidin-2-one, Deoxyadenosine/deoxycytidine kinase
著者Ushimaru, R, Mori, T, Liu, H.-w, Abe, I.
登録日2023-04-22
公開日2024-04-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of kinase AbmG in complex with 4'-thiocytidine
To Be Published
8J5F
DownloadVisualize
BU of 8j5f by Molmil
Crystal structure of kinase AbmG in complex with cytidine and ADP
分子名称: 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, ADENOSINE-5'-DIPHOSPHATE, Deoxyadenosine/deoxycytidine kinase
著者Ushimaru, R, Mori, T, Liu, H.-w, Abe, I.
登録日2023-04-22
公開日2024-04-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of kinase AbmG in complex with cytidine and ADP
To Be Published
3UDY
DownloadVisualize
BU of 3udy by Molmil
Crystal Structure of BACE with Compound 11
分子名称: 1,2-ETHANEDIOL, 3-bromo-4-cyanobenzyl (3S,5'R)-2-oxo-1,2-dihydrospiro[indole-3,3'-pyrrolidine]-5'-carboxylate, Beta-secretase 1, ...
著者Efremov, I.V, Vajdos, F.F, Borzilleri, K, Capetta, S, Dorff, P, Dutra, J, Mansour, M, Oborski, C, O'Connell, T, O'Sullivan, T.J, Pandit, J, Wang, H, Withka, J.
登録日2011-10-28
公開日2012-04-18
最終更新日2018-04-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery and optimization of a novel spiropyrrolidine inhibitor of {beta}-secretase (BACE1) through fragment-based drug design.
J.Med.Chem., 55, 2012
8J5G
DownloadVisualize
BU of 8j5g by Molmil
Crystal structure of kinase AbmG in complex with 4'-hydroxy-4'-thiocytidine 5'-diphosphate
分子名称: Deoxyadenosine/deoxycytidine kinase, [(2~{S},3~{S},4~{R},5~{R})-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-2-(hydroxymethyl)-3,4-bis(oxidanyl)thiolan-2-yl] phosphono hydrogen phosphate
著者Ushimaru, R, Mori, T, Liu, H.-w, Abe, I.
登録日2023-04-22
公開日2024-04-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of kinase AbmG in complex with 4'-hydroxy-4'-thiocytidine 5'-diphosphate
To Be Published
4K9T
DownloadVisualize
BU of 4k9t by Molmil
Complex of CYP3A4 with a desoxyritonavir analog
分子名称: Cytochrome P450 3A4, N~2~-(methyl{[2-(propan-2-yl)-1,3-thiazol-4-yl]methyl}carbamoyl)-N-(4-{[(1,3-thiazol-5-ylmethoxy)carbonyl]amino}butyl)-L-valinamide, PROTOPORPHYRIN IX CONTAINING FE
著者Sevrioukova, I.F, Poulos, T.L.
登録日2013-04-21
公開日2013-06-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Dissecting Cytochrome P450 3A4-Ligand Interactions Using Ritonavir Analogues.
Biochemistry, 52, 2013
5HNS
DownloadVisualize
BU of 5hns by Molmil
Structure of glycosylated NPC1 luminal domain C
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Niemann-Pick C1 protein, ...
著者Zhao, Y, Ren, J, Harlos, K, Stuart, D.I.
登録日2016-01-18
公開日2016-02-10
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structure of glycosylated NPC1 luminal domain C reveals insights into NPC2 and Ebola virus interactions.
Febs Lett., 590, 2016
6Z0E
DownloadVisualize
BU of 6z0e by Molmil
HtrA1 inactive protease domain S328A with CARASIL mutation R274Q
分子名称: CALCIUM ION, Serine protease HTRA1
著者Vetter, I.R, Stege, P, Ingendahl, L, Ehrmann, M.
登録日2020-05-08
公開日2021-05-19
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Repair strategies addressing pathogenic protein conformations
To Be Published
4ZLR
DownloadVisualize
BU of 4zlr by Molmil
Structure of the Brat-NHL domain bound to consensus RNA motif
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Brain tumor protein, PENTAETHYLENE GLYCOL, ...
著者Jakob, L, Treiber, N, Treiber, T, Stotz, M, Loedige, I, Meister, G.
登録日2015-05-01
公開日2015-11-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Crystal Structure of the NHL Domain in Complex with RNA Reveals the Molecular Basis of Drosophila Brain-Tumor-Mediated Gene Regulation.
Cell Rep, 13, 2015
3LQM
DownloadVisualize
BU of 3lqm by Molmil
Structure of the IL-10R2 Common Chain
分子名称: GLYCEROL, Interleukin-10 receptor subunit beta, SULFATE ION
著者Yoon, S.I, Walter, M.R.
登録日2010-02-09
公開日2010-05-26
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Structure and mechanism of receptor sharing by the IL-10R2 common chain.
Structure, 18, 2010
8IXP
DownloadVisualize
BU of 8ixp by Molmil
Apo structure of glycosyltransferase LmbT wild type
分子名称: Glycosyltransferase
著者Mori, T, Sun, X, Abe, I.
登録日2023-04-02
公開日2024-04-03
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Apo structure of glycosyltransferase LmbT wild type
To Be Published

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon