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PDB: 17801 件

6YK8
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OTU-like deubiquitinase from Legionella -Lpg2529
分子名称: PLATINUM (II) ION, Uncharacterized protein
著者Shin, D, Dikic, I.
登録日2020-04-05
公開日2021-02-10
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Bacterial OTU deubiquitinases regulate substrate ubiquitination upon Legionella infection.
Elife, 9, 2020
6JFA
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Met-Ala-Ser bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa
分子名称: MET-ALA-SER, NICKEL (II) ION, Peptide deformylase
著者Lee, I.H, Ho, T.H, Kang, L.W.
登録日2019-02-08
公開日2020-02-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Met-Ala-Ser bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa
To be published
6CXG
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anti-HIV-1 Fab 2G12 in complex with glycopeptide 10V1S
分子名称: 10V1S glycopeptide, GLYCEROL, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose, ...
著者Stanfield, R.L, Wilson, I.A.
登録日2018-04-03
公開日2019-02-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.298 Å)
主引用文献Oligomannose Glycopeptide Conjugates Elicit Antibodies Targeting the Glycan Core Rather than Its Extremities.
ACS Cent Sci, 5, 2019
5CN6
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BU of 5cn6 by Molmil
Ultrafast dynamics in myoglobin: 0.1 ps time delay
分子名称: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Barends, T.R.M, Foucar, L, Ardevol, A, Nass, K.J, Aquila, A, Botha, S, Doak, R.B, Falahati, K, Hartmann, E, Hilpert, M, Heinz, M, Hoffmann, M.C, Koefinger, J, Koglin, J, Kovacsova, G, Liang, M, Milathianaki, D, Lemke, H.T, Reinstein, J, Roome, C.M, Shoeman, R.L, Williams, G.J, Burghardt, I, Hummer, G, Boutet, S, Schlichting, I.
登録日2015-07-17
公開日2015-09-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation.
Science, 350, 2015
1IVS
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BU of 1ivs by Molmil
CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS VALYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(VAL) AND VALYL-ADENYLATE ANALOGUE
分子名称: N-[VALINYL]-N'-[ADENOSYL]-DIAMINOSUFONE, Valyl-tRNA synthetase, tRNA (Val)
著者Fukai, S, Nureki, O, Sekine, S.-I, Shimada, A, Vassylyev, D.G, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-03-29
公開日2003-02-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Mechanism of molecular interactions for tRNA(Val) recognition by valyl-tRNA synthetase
RNA, 9, 2003
1X2J
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BU of 1x2j by Molmil
Structural basis for the defects of human lung cancer somatic mutations in the repression activity of Keap1 on Nrf2
分子名称: Kelch-like ECH-associated protein 1, SULFATE ION
著者Padmanabhan, B, Tong, K.I, Nakamura, Y, Ohta, T, Scharlock, M, Kobayashi, A, Ohtsuji, M, Kang, M.-I, Yamamoto, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-04-25
公開日2006-03-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural basis for defects of keap1 activity provoked by its point mutations in lung cancer
Mol.Cell, 21, 2006
1X2R
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Structural basis for the defects of human lung cancer somatic mutations in the repression activity of Keap1 on Nrf2
分子名称: Kelch-like ECH-associated protein 1, Nuclear factor erythroid 2 related factor 2, SULFATE ION
著者Padmanabhan, B, Tong, K.I, Nakamura, Y, Ohta, T, Scharlock, M, Kobayashi, A, Ohtsuji, M, Kang, M.-I, Yamamoto, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-04-26
公開日2006-03-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for defects of keap1 activity provoked by its point mutations in lung cancer
Mol.Cell, 21, 2006
6WTH
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BU of 6wth by Molmil
Full-length human ENaC ECD
分子名称: 10D4 Fab, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Posert, R, Baconguis, I, Noreng, S, Bharadwaj, A, Houser, A.
登録日2020-05-02
公開日2020-08-12
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Molecular principles of assembly, activation, and inhibition in epithelial sodium channel.
Elife, 9, 2020
6JFE
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BU of 6jfe by Molmil
K2U bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa
分子名称: NICKEL (II) ION, Peptide deformylase, S-(2-oxo-2-phenylethyl) (2R)-2-benzyl-4,4,4-trifluorobutanethioate
著者Lee, I.H, Ho, T.H, Kang, L.W.
登録日2019-02-08
公開日2020-02-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献K2U bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa
To be published
5CCG
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BU of 5ccg by Molmil
Structure of the Ca2+-bound synaptotagmin-1 SNARE complex (long unit cell form)
分子名称: CALCIUM ION, Synaptosomal-associated protein 25, Synaptotagmin-1, ...
著者Zhou, Q, Zhao, M, Lyubimov, A.Y, Uervirojnangkoorn, M, Zeldin, O.B, Weis, W.I, Brunger, A.T.
登録日2015-07-02
公開日2015-08-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Architecture of the synaptotagmin-SNARE machinery for neuronal exocytosis.
Nature, 525, 2015
7QNQ
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BU of 7qnq by Molmil
Structure of the Aux2 relaxosome protein of plasmid pLS20
分子名称: Auxiliary relaxosome protein, CHLORIDE ION, MAGNESIUM ION
著者Boer, D.R, Crespo, I.
登録日2021-12-22
公開日2022-03-09
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structural and biochemical characterization of the relaxosome auxiliary proteins encoded on the Bacillus subtilis plasmid pLS20.
Comput Struct Biotechnol J, 20, 2022
5NPQ
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BU of 5npq by Molmil
Human N-myristoyltransferase 1 (MNT1) with Myristoyl-CoA analogue X10 bound
分子名称: GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, MAGNESIUM ION, ...
著者Shen, M, Perez-Dorado, I, Fedoryshchak, R, Tate, E.W.
登録日2017-04-18
公開日2018-05-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.372 Å)
主引用文献Human N-myristoyltransferase 1 (MNT1) with Myristoyl-CoA analogue X10 bound.
To be published
5CNB
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BU of 5cnb by Molmil
Ultrafast dynamics in myoglobin: 0.5 ps time delay
分子名称: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Barends, T.R.M, Foucar, L, Ardevol, A, Nass, K.J, Aquila, A, Botha, S, Doak, R.B, Falahati, K, Hartmann, E, Hilpert, M, Heinz, M, Hoffmann, M.C, Koefinger, J, Koglin, J, Kovacsova, G, Liang, M, Milathianaki, D, Lemke, H.T, Reinstein, J, Roome, C.M, Shoeman, R.L, Williams, G.J, Burghardt, I, Hummer, G, Boutet, S, Schlichting, I.
登録日2015-07-17
公開日2015-09-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation.
Science, 350, 2015
1IRJ
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BU of 1irj by Molmil
Crystal Structure of the MRP14 complexed with CHAPS
分子名称: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, CALCIUM ION, Migration Inhibitory Factor-Related Protein 14
著者Itou, H, Yao, M, Watanabe, N, Nishihira, J, Tanaka, I.
登録日2001-10-09
公開日2002-02-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The crystal structure of human MRP14 (S100A9), a Ca(2+)-dependent regulator protein in inflammatory process.
J.Mol.Biol., 316, 2002
7QHY
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BU of 7qhy by Molmil
Structure of a Kluyveromyces lactis protein involved in RNA decay
分子名称: GLYCEROL, Nonsense-mediated decay protein 4,Nonsense-mediated decay protein 4,Nonsense mediated mRNA decay protein 4 (Nmd4), SULFATE ION
著者Barbarin-Bocahu, I, Graille, M.
登録日2021-12-14
公開日2022-03-23
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献The X-ray crystallography phase problem solved thanks to AlphaFold and RoseTTAFold models: a case-study report.
Acta Crystallogr D Struct Biol, 78, 2022
6YO5
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BU of 6yo5 by Molmil
Crystal structure of the M295F variant of Ssl1
分子名称: ALA-HIS-ALA, COPPER (II) ION, Copper oxidase, ...
著者Mielenbrink, S, Olbrich, A, Urlacher, V, Span, I.
登録日2020-04-14
公開日2021-04-28
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Effect of the axial ligand mutation on spectral and structural properties of Ssl1 laccase
To Be Published
6YGU
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BU of 6ygu by Molmil
Crystal structure of the minimal Mtr4-Red1 complex (single chain) from Chaetomium thermophilum
分子名称: 1,2-ETHANEDIOL, ACETATE ION, ATP dependent RNA helicase (Dob1)-like protein, ...
著者Dobrev, N, Ahmed, Y.L, Sinning, I.
登録日2020-03-27
公開日2021-05-05
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献The zinc-finger protein Red1 orchestrates MTREC submodules and binds the Mtl1 helicase arch domain.
Nat Commun, 12, 2021
5CNG
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BU of 5cng by Molmil
ultrafast dynamics in myoglobin: 150 ps time delay
分子名称: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Barends, T.R.M, Foucar, L, Ardevol, A, Nass, K, Aquila, A, Botha, S, Doak, R.B, Falahati, K, Hartmann, E, Hilpert, M, Heinz, M, Hoffmann, M, Koefinger, J, Koglin, J, Kovacsova, G, Liang, M, Milathianaki, D, Lemke, H.T, Reinstein, J, Roome, C.M, Shoeman, R.L, Williams, G.J, Burghardt, I, Hummer, G, Boutet, S, Schlichting, I.
登録日2015-07-17
公開日2015-09-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation.
Science, 350, 2015
6YRN
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BU of 6yrn by Molmil
Structure of the Chlamydomonas reinhardtii SAS-6 coiled-coil domain, P2 crystal form
分子名称: Centriole protein, TETRAETHYLENE GLYCOL
著者Kantsadi, A.L, Vakonakis, I.
登録日2020-04-20
公開日2021-05-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Structures of SAS-6 coiled coil hold implications for the polarity of the centriolar cartwheel.
Structure, 2022
5NCT
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BU of 5nct by Molmil
Structure of the trypsin induced serpin-type proteinase inhibitor, miropin.
分子名称: ASPARTIC ACID, GLYCEROL, SERINE, ...
著者Goulas, T, Ksiazek, M, Garcia-Ferrer, I, Mizgalska, D, Potempa, J, Gomis-Ruth, X.
登録日2017-03-06
公開日2017-05-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A structure-derived snap-trap mechanism of a multispecific serpin from the dysbiotic human oral microbiome.
J. Biol. Chem., 292, 2017
6YS4
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BU of 6ys4 by Molmil
Structure of the Homo sapiens SAS-6 coiled-coil domain
分子名称: GLYCINE, Spindle assembly abnormal protein 6 homolog, TETRAETHYLENE GLYCOL
著者Kantsadi, A.L, Vakonakis, I.
登録日2020-04-21
公開日2021-05-12
最終更新日2022-03-16
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Structures of SAS-6 coiled coil hold implications for the polarity of the centriolar cartwheel.
Structure, 2022
6Y1I
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BU of 6y1i by Molmil
Human Eg5 motor domain mutant R234C
分子名称: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF11, MAGNESIUM ION
著者Garcia-Saez, I, Skoufias, D.A.
登録日2020-02-12
公開日2021-06-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Human Eg5 motor domain mutant R234C
To Be Published
5CN9
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BU of 5cn9 by Molmil
Ultrafast dynamics in myoglobin: 0.4 ps time delay
分子名称: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Barends, T.R.M, Foucar, L, Ardevol, A, Nass, K.J, Aquila, A, Botha, S, Doak, R.B, Falahati, K, Hartmann, E, Hilpert, M, Heinz, M, Hoffmann, M.C, Koefinger, J, Koglin, J, Kovacsova, G, Liang, M, Milathianaki, D, Lemke, H.T, Reinstein, J, Roome, C.M, Shoeman, R.L, Williams, G.J, Burghardt, I, Hummer, G, Boutet, S, Schlichting, I.
登録日2015-07-17
公開日2015-09-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation.
Science, 350, 2015
6Y4A
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BU of 6y4a by Molmil
Crystal structure of the M295I variant of Ssl1
分子名称: COPPER (II) ION, Copper oxidase
著者Mielenbrink, S, Olbrich, A, Urlacher, V, Span, I.
登録日2020-02-20
公開日2021-09-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.785 Å)
主引用文献Effect of the axial ligand mutation on spectral and structural properties of Ssl1 laccase
To Be Published
6YAX
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BU of 6yax by Molmil
Crystal structure of CD32b (Fc Gamma Receptor IIb) in complex with Human IgG1 Fab fragment (5C05)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5C05 F(ab) heavy chain, ...
著者Fisher, H, Tews, I, Orr, C.
登録日2020-03-14
公開日2021-10-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of CD32b (Fc Gamma Receptor IIb) in complex with Human IgG1 Fab fragment (5C05)
To Be Published

223532

件を2024-08-07に公開中

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