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PDB: 17892 件

8RCG
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W-formate dehydrogenase M405S from Desulfovibrio vulgaris
分子名称: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, ...
著者Vilela-Alves, G, Manuel, R.R, Pereira, I.C, Romao, M.J, Mota, C.
登録日2023-12-06
公開日2024-05-08
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (2.005 Å)
主引用文献Structural and biochemical characterization of the M405S variant of Desulfovibrio vulgaris formate dehydrogenase.
Acta Crystallogr.,Sect.F, 80, 2024
8QXO
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Cryo-EM structure of tetrameric human SAMHD1 State V - Depleted relaxed
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, ...
著者Acton, O.J, Sheppard, D, Rosenthal, P.B, Taylor, I.A.
登録日2023-10-24
公開日2024-05-15
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.43 Å)
主引用文献Platform-directed allostery and quaternary structure dynamics of SAMHD1 catalysis.
Nat Commun, 15, 2024
1O27
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Crystal structure of Thymidylate Synthase Complementing Protein (TM0449) from Thermotoga maritima with FAD and BrdUMP at 2.3 A resolution
分子名称: 5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, Thymidylate synthase thyX
著者Mathews, I.I, Deacon, A.M, Canaves, J.M, McMullan, D, Lesley, S.A, Agarwalla, S, Kuhn, P, Joint Center for Structural Genomics (JCSG)
登録日2003-02-18
公開日2003-06-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Functional Analysis of Substrate and Cofactor Complex Structures of a Thymidylate Synthase-Complementing Protein
Structure, 11, 2003
8QQ1
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SpNOX dehydrogenase domain, mutant F397W in complex with Flavin adenine dinucleotide (FAD)
分子名称: BROMIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Oxidoreductase
著者Humm, A.S, Dupeux, F, Vermot, A, Petit-Harleim, I, Fieschi, F, Marquez, J.A.
登録日2023-10-03
公開日2024-05-08
実験手法X-RAY DIFFRACTION (1.941 Å)
主引用文献X-ray structure and enzymatic study of a bacterial NADPH oxidase highlight the activation mechanism of eukaryotic NOX.
Elife, 13, 2024
5JSD
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Crystal structure of phiAB6 tailspike in complex with five-repeated oligosaccharides of Acinetobacter baumannii surface polysaccharide
分子名称: ACETIC ACID, MALONIC ACID, beta-D-galactopyranose-(1-3)-2-amino-2-deoxy-beta-D-galactopyranose-(1-3)-[5,7-bisacetamido-3,5,7,9-tetradeoxy-L-glycero-alpha-L-manno-non-2-ulopyranosonic acid-(2-6)-beta-D-glucopyranose-(1-6)]beta-D-galactopyranose-(1-3)-2-amino-2-deoxy-beta-D-galactopyranose-(1-3)-[beta-D-glucopyranose-(1-6)]beta-D-galactopyranose, ...
著者Lee, I.M, Tu, I.F, Huang, K.F, Wu, S.H.
登録日2016-05-08
公開日2017-03-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Structural basis for fragmenting the exopolysaccharide of Acinetobacter baumannii by bacteriophage Phi AB6 tailspike protein
Sci Rep, 7, 2017
7VG4
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10,5-methenyltetrahydrofolate cyclohydrolase from Methylobacterium extorquens AM1 strain
分子名称: Methenyltetrahydrofolate cyclohydrolase
著者Kim, S, Lee, S, Kim, I.-K, Seo, H, Kim, K.-J.
登録日2021-09-14
公開日2022-07-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Structural insight into a molecular mechanism of methenyltetrahydrofolate cyclohydrolase from Methylobacterium extorquens AM1.
Int.J.Biol.Macromol., 202, 2022
1RT7
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HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH UC84
分子名称: 1-METHYL ETHYL 1-CHLORO-5-[[(5,6DIHYDRO-2-METHYL-1,4-OXATHIIN-3-YL)CARBONYL]AMINO]BENZOATE, HIV-1 REVERSE TRANSCRIPTASE, PHOSPHATE ION
著者Ren, J, Stammers, D.K, Stuart, D.I.
登録日1998-07-29
公開日1999-07-29
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structures of HIV-1 reverse transcriptase in complex with carboxanilide derivatives.
Biochemistry, 37, 1998
1RT5
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HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH UC10
分子名称: HIV-1 REVERSE TRANSCRIPTASE, N-[4-CLORO-3-(T-BUTYLOXOME)PHENYL-2-METHYL-3-FURAN-CARBOTHIAMIDE, PHOSPHATE ION
著者Ren, J, Stammers, D.K, Stuart, D.I.
登録日1998-07-29
公開日1999-07-29
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structures of HIV-1 reverse transcriptase in complex with carboxanilide derivatives.
Biochemistry, 37, 1998
1RT6
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HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH UC38
分子名称: 1-METHYL ETHYL 2-CHLORO-5-[[[(1-METHYLETHOXY)THIOOXO]METHYL]AMINO]-BENZOATE, HIV-1 REVERSE TRANSCRIPTASE, PHOSPHATE ION
著者Ren, J, Stammers, D.K, Stuart, D.I.
登録日1998-07-29
公開日1999-07-29
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structures of HIV-1 reverse transcriptase in complex with carboxanilide derivatives.
Biochemistry, 37, 1998
1RT4
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HIV-1 REVERSE TRANSCRIPTASE COMPLEXED WITH UC781
分子名称: 2-METHYL-FURAN-3-CARBOTHIOIC ACID [4-CHLORO-3-(3-METHYL-BUT-2-ENYLOXY)-PHENYL]-AMIDE, HIV-1 REVERSE TRANSCRIPTASE, PHOSPHATE ION
著者Ren, J, Stammers, D.K, Stuart, D.I.
登録日1998-07-29
公開日1999-07-29
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structures of HIV-1 reverse transcriptase in complex with carboxanilide derivatives.
Biochemistry, 37, 1998
5DOU
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BU of 5dou by Molmil
Crystal Structure of Human Carbamoyl phosphate synthetase I (CPS1), ligand-bound form
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ...
著者de Cima, S, Polo, L.M, Fita, I, Rubio, V.
登録日2015-09-11
公開日2015-12-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of human carbamoyl phosphate synthetase: deciphering the on/off switch of human ureagenesis.
Sci Rep, 5, 2015
6F6Q
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Carboxypeptidase T mutant L254N with Sulphamoil Arginine
分子名称: CALCIUM ION, Carboxypeptidase T, N~2~-sulfamoyl-L-arginine, ...
著者Timofeev, V.I, Akparov, V.K, Kuranova, I.P.
登録日2017-12-06
公開日2018-08-15
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Carboxypeptidase T mutant L254N with Sulphamoil Arginine
To Be Published
1TIM
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BU of 1tim by Molmil
STRUCTURE OF TRIOSE PHOSPHATE ISOMERASE FROM CHICKEN MUSCLE
分子名称: TRIOSEPHOSPHATE ISOMERASE
著者Banner, D.W, Bloomer, A.C, Petsko, G.A, Phillips, D.C, Wilson, I.A.
登録日1976-09-01
公開日1976-10-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Atomic coordinates for triose phosphate isomerase from chicken muscle.
Biochem.Biophys.Res.Commun., 72, 1976
7QNX
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The receptor binding domain of SARS-CoV-2 spike glycoprotein in complex with Beta-55 and EY6A Fabs
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-55 heavy chain, Beta-55 light chain, ...
著者Zhou, D, Ren, J, Stuart, D.I.
登録日2021-12-23
公開日2022-01-19
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献SARS-CoV-2 Omicron-B.1.1.529 leads to widespread escape from neutralizing antibody responses.
Cell, 185, 2022
8RT1
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BTV15 VP5 at pH 9.0
分子名称: Outer capsid protein VP5
著者Sutton, G.C, Stuart, D.I.
登録日2024-01-25
公開日2024-09-04
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The effect of pH on the structure of Bluetongue virus VP5.
J.Gen.Virol., 105, 2024
2PPD
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BU of 2ppd by Molmil
Oxidized H145A mutant of AfNiR bound to nitric oxide
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (I) ION, ...
著者Tocheva, E.I, Murphy, M.E.P.
登録日2007-04-28
公開日2008-01-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Stable copper-nitrosyl formation by nitrite reductase in either oxidation state
Biochemistry, 46, 2007
6GMX
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pVHL:EloB:EloC in complex with 6-chlorothiochroman-4-one
分子名称: 6-chloranyl-2,3-dihydrothiochromen-4-one, ACETATE ION, Elongin-B, ...
著者Van Molle, I, Lucas, X, Ciulli, A.
登録日2018-05-28
公開日2018-08-08
最終更新日2018-09-05
実験手法X-RAY DIFFRACTION (2.533 Å)
主引用文献Surface Probing by Fragment-Based Screening and Computational Methods Identifies Ligandable Pockets on the von Hippel-Lindau (VHL) E3 Ubiquitin Ligase.
J. Med. Chem., 61, 2018
7Q5R
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BU of 7q5r by Molmil
Protein community member pyruvate dehydrogenase complex E2 core from C. thermophilum
分子名称: Acetyltransferase component of pyruvate dehydrogenase complex
著者Chojnowski, G, Skalidis, I, Kyrilis, F.L, Tueting, C, Hamdi, F, Kastritis, P.L.
登録日2021-11-04
公開日2022-02-02
最終更新日2023-12-13
実験手法ELECTRON MICROSCOPY (3.84 Å)
主引用文献Cryo-EM and artificial intelligence visualize endogenous protein community members.
Structure, 30, 2022
6T1A
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Structure of mosquitocidal Cyt1Aa protoxin obtained by Serial Femtosecond Crystallography on in vivo grown crystals at pH 10
分子名称: CALCIUM ION, Type-1Aa cytolytic delta-endotoxin
著者Tetreau, G, Banneville, A.S, Andreeva, E, Brewster, A.S, Hunter, M.S, Sierra, R.G, Young, I.D, Boutet, S, Coquelle, N, Cascio, D, Sawaya, M.R, Sauter, N.K, Colletier, J.P.
登録日2019-10-03
公開日2020-10-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Serial femtosecond crystallography on in vivo-grown crystals drives elucidation of mosquitocidal Cyt1Aa bioactivation cascade.
Nat Commun, 11, 2020
7Q5Q
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Protein community member oxoglutarate dehydrogenase complex E2 core from C. thermophilum
分子名称: Dihydrolipoyllysine-residue succinyltransferase
著者Chojnowski, G, Skalidis, I, Kyrilis, F.L, Tueting, C, Hamdi, F, Kastritis, P.L.
登録日2021-11-04
公開日2022-02-02
最終更新日2023-12-13
実験手法ELECTRON MICROSCOPY (4.38 Å)
主引用文献Cryo-EM and artificial intelligence visualize endogenous protein community members.
Structure, 30, 2022
7Q5S
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Protein community member fatty acid synthase complex from C. thermophilum
分子名称: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, 3-oxoacyl-[acyl-carrier-protein] reductase
著者Chojnowski, G, Skalidis, I, Kyrilis, F.L, Tueting, C, Hamdi, F, Kastritis, P.L.
登録日2021-11-04
公開日2022-02-02
最終更新日2023-12-13
実験手法ELECTRON MICROSCOPY (4.47 Å)
主引用文献Cryo-EM and artificial intelligence visualize endogenous protein community members.
Structure, 30, 2022
1AFA
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STRUCTURAL BASIS OF GALACTOSE RECOGNITION IN C-TYPE ANIMAL LECTINS
分子名称: CALCIUM ION, CHLORIDE ION, MANNOSE-BINDING PROTEIN-A, ...
著者Kolatkar, A.R, Weis, W.I.
登録日1995-11-03
公開日1996-04-03
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of galactose recognition by C-type animal lectins.
J.Biol.Chem., 271, 1996
6GMN
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pVHL:EloB:EloC in complex with methyl 4H-furo[3,2-b]pyrrole-5-carboxylate
分子名称: ACETATE ION, Elongin-B, Elongin-C, ...
著者Van Molle, I, Lucas, X, Ciulli, A.
登録日2018-05-27
公開日2018-08-08
最終更新日2018-09-05
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Surface Probing by Fragment-Based Screening and Computational Methods Identifies Ligandable Pockets on the von Hippel-Lindau (VHL) E3 Ubiquitin Ligase.
J. Med. Chem., 61, 2018
7VUC
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Myoglobin mutant L29I/H64G/V68A
分子名称: IMIDAZOLE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Takahashi, K, Korendovych, I.V, Tame, J.R.H.
登録日2021-11-02
公開日2022-07-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献NMR-guided directed evolution.
Nature, 610, 2022
6V2R
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Crystal Structure of chromodomain of CBX7 mutant V13A in complex with inhibitor UNC3866
分子名称: Chromobox protein homolog 7, UNC3866, UNKNOWN ATOM OR ION
著者Liu, Y, Tempel, W, Walker, J.R, Stuckey, J.I, Dickson, B.M, James, L.I, Frye, S.V, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2019-11-25
公開日2019-12-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Basis for the Binding Selectivity of Human CDY Chromodomains.
Cell Chem Biol, 27, 2020

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