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PDB: 17898 results

3D8M
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Crystal structure of a chimeric receptor binding protein from lactococcal phages subspecies TP901-1 and p2
Descriptor: Baseplate protein, Receptor binding protein
Authors:Siponen, M.I, Blangy, S, Spinelli, S, Cambillau, C, Campanacci, V.
Deposit date:2008-05-23
Release date:2009-04-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Crystal structure of a chimeric receptor binding protein constructed from two lactococcal phages
J.Bacteriol., 191, 2009
3KUF
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BU of 3kuf by Molmil
The Crystal Structure of the Tudor Domains from FXR1
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Fragile X mental retardation syndrome-related protein 1, GLYCEROL
Authors:Bian, C, Guo, Y.H, Adams-Cioaba, M.A, Mackenzie, F, Kozieradzki, I, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2009-11-27
Release date:2010-01-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the Tudor domains from Fragile X mental retardation syndrome-related protein 1
To be Published
2RJD
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BU of 2rjd by Molmil
Crystal structure of L3MBTL1 protein
Descriptor: Lethal(3)malignant brain tumor-like protein
Authors:Allali-Hassani, A, Liu, Y, Herzanych, N, Ouyang, H, Mackenzie, F, Crombet, L, Loppnau, P, Kozieradzki, I, Vedadi, M, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J.R, Structural Genomics Consortium (SGC)
Deposit date:2007-10-14
Release date:2007-10-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:L3MBTL1 recognition of mono- and dimethylated histones.
Nat.Struct.Mol.Biol., 14, 2007
2VKQ
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BU of 2vkq by Molmil
Crystal structure of human cytosolic 5'-nucleotidase III (cN-III, NT5C3) in complex with beryllium trifluoride
Descriptor: BERYLLIUM TRIFLUORIDE ION, CYTOSOLIC 5'-NUCLEOTIDASE III, MAGNESIUM ION
Authors:Wallden, K, Moche, M, Arrowsmith, C.H, Berglund, H, Busam, R, Collins, R, Dahlgren, L.G, Edwards, A, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Herman, M.D, Johansson, A, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Lehtio, L, Nilsson, M.E, Nyman, T, Persson, C, Sagemark, J, Thorsell, A.G, Tresaugues, L, van den Berg, S, Weigelt, J, Welin, M, Nordlund, P, Structural Genomics Consortium (SGC)
Deposit date:2007-12-21
Release date:2008-01-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Human Cytosolic 5'- Nucleotidase III
To be Published
3DUI
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BU of 3dui by Molmil
Crystal structure of the oxidized CG-1B: an adhesion/growth-regulatory lectin from chicken
Descriptor: BETA-MERCAPTOETHANOL, Beta-galactoside-binding lectin
Authors:Romero, A, Lopez-Lucendo, M.I.F, Solis, D, Gabius, H.-J.
Deposit date:2008-07-17
Release date:2009-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Homodimeric chicken galectin CG-1B (C-14): Crystal structure and detection of unique redox-dependent shape changes involving inter- and intrasubunit disulfide bridges by gel filtration, ultracentrifugation, site-directed mutagenesis, and peptide mass fingerprinting
J.Mol.Biol., 386, 2009
1GWP
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BU of 1gwp by Molmil
STRUCTURE OF THE N-TERMINAL DOMAIN OF THE MATURE HIV-1 CAPSID PROTEIN
Descriptor: GAG POLYPROTEIN
Authors:Tang, C, Gitti, R.K, Lee, B.M, Walker, J, Summers, M.F, Yoo, S, Sundquist, W.I.
Deposit date:2002-03-22
Release date:2002-06-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the N-Terminal 283-Residue Fragment of the Immature HIV-1 Gag Polyprotein
Nat.Struct.Biol., 9, 2002
6O1Z
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BU of 6o1z by Molmil
Structure of pCW3 conjugation coupling protein TcpA hexagonal crystal form
Descriptor: DNA translocase coupling protein
Authors:Traore, D.A.K, Ahktar, N, Torres, V.T, Adams, V, Coulibaly, F, Panjikar, S, Caradoc-Davies, T.T, Rood, J.I, Whisstock, J.C.
Deposit date:2019-02-22
Release date:2020-03-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of pCW3 conjugation coupling protein TcpA
To be published
6O1Y
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Structure of pCW3 conjugation coupling protein TcpA monomeric form with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA translocase coupling protein, beta-D-glucopyranose
Authors:Traore, D.A.K, Ahktar, N, Torres, V.T, Adams, V, Coulibaly, F, Panjikar, S, Caradoc-Davies, T.T, Rood, J.I, Whisstock, J.C.
Deposit date:2019-02-22
Release date:2020-02-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of pCW3 conjugation coupling protein TcpA
To be published
6O1X
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BU of 6o1x by Molmil
Structure of pCW3 conjugation coupling protein TcpA monomer form with ATPgS
Descriptor: DNA translocase coupling protein, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, beta-D-glucopyranose
Authors:Traore, D.A.K, Ahktar, N, Torres, V.T, Adams, V, Coulibaly, F, Panjikar, S, Caradoc-Davies, T.T, Rood, J.I, Whisstock, J.C.
Deposit date:2019-02-22
Release date:2020-02-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structure of pCW3 conjugation coupling protein TcpA
To be published
3BIN
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BU of 3bin by Molmil
Structure of the DAL-1 and TSLC1 (372-383) complex
Descriptor: Band 4.1-like protein 3, Cell adhesion molecule 1
Authors:Busam, R.D, Arrowsmith, C.H, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Sagemark, J, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Berglund, H, Persson, C, Hallberg, B.M.
Deposit date:2007-11-30
Release date:2008-01-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of tumor suppressor in lung cancer 1 (TSLC1) binding to differentially expressed in adenocarcinoma of the lung (DAL-1/4.1B)
J.Biol.Chem., 286, 2011
3TZD
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BU of 3tzd by Molmil
Crystal structure of the complex of Human Chromobox Homolog 3 (CBX3)
Descriptor: Chromobox protein homolog 3, Histone H1.4
Authors:Amaya, M.F, Ravichandran, M, Loppnau, P, Kozieradzki, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Bountra, C, Bochkarev, A, Min, J, Ouyang, H, Structural Genomics Consortium (SGC)
Deposit date:2011-09-27
Release date:2012-03-07
Last modified:2013-01-23
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structural basis of the chromodomain of Cbx3 bound to methylated peptides from histone h1 and G9a.
Plos One, 7, 2012
4J0R
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BU of 4j0r by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with a 3,5-dimethylisoxazol ligand
Descriptor: 1,2-ETHANEDIOL, 3-(3,5-dimethyl-1,2-oxazol-4-yl)-5-[(R)-hydroxy(phenyl)methyl]phenol, Bromodomain-containing protein 4, ...
Authors:Filippakopoulos, P, Picaud, S, Qi, J, Felletar, I, Hewings, D.S, von Delft, F, Conway, S.J, Bountra, C, Arrowsmith, C.H, Edwards, A, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2013-01-31
Release date:2013-02-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Optimization of 3,5-dimethylisoxazole derivatives as potent bromodomain ligands.
J.Med.Chem., 56, 2013
3SN2
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BU of 3sn2 by Molmil
Crystal structure analysis of iron regulatory protein 1 in complex with transferrin receptor IRE B RNA
Descriptor: Cytoplasmic aconitate hydratase, transferrin receptor iron regulatory element B RNA
Authors:Volz, K, Selezneva, A.I, Walden, W.E.
Deposit date:2011-06-28
Release date:2011-11-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Accommodating variety in iron-responsive elements: Crystal structure of transferrin receptor 1 B IRE bound to iron regulatory protein 1.
Febs Lett., 586, 2012
3W08
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BU of 3w08 by Molmil
Crystal structure of aldoxime dehydratase
Descriptor: Aldoxime dehydratase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Hashimoto, H, Nomura, J, Hashimoto, Y, Oinuma, K.I, Wada, K, Hishiki, A, Hara, K, Kobayashi, M.
Deposit date:2012-10-24
Release date:2013-02-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of aldoxime dehydratase and its catalytic mechanism involved in carbon-nitrogen triple-bond synthesis.
Proc.Natl.Acad.Sci.USA, 110, 2013
413D
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BU of 413d by Molmil
A'-FORM RNA DOUBLE HELIX IN THE SINGLE CRYSTAL STRUCTURE OF R(UGAGCUUCGGCUC)
Descriptor: RNA (5'-R(*UP*GP*AP*GP*CP*UP*UP*CP*GP*GP*CP*UP*C)-3')
Authors:Tanaka, Y, Fujii, S, Hiroaki, H, Sakata, T, Tanaka, T, Uesugi, S, Tomita, K.-I, Kyogoku, Y.
Deposit date:1998-07-10
Release date:1998-07-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A'-form RNA double helix in the single crystal structure of r(UGAGCUUCGGCUC).
Nucleic Acids Res., 27, 1999
8I32
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BU of 8i32 by Molmil
D-alanyl carrier protein mutant-S36A
Descriptor: D-alanyl carrier protein, GLYCEROL
Authors:Jeon, H, Lee, I.
Deposit date:2023-01-16
Release date:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of D-alanyl carrier protein at 2.09 Angstroms resolution.
To Be Published
8I31
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BU of 8i31 by Molmil
D-alanyl carrier protein
Descriptor: D-alanyl carrier protein
Authors:Jeon, H, Lee, I.-G.
Deposit date:2023-01-16
Release date:2024-03-13
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structure of D-alanyl carrier protein at 2.3 Angstroms resolution.
To Be Published
8GBB
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BU of 8gbb by Molmil
Short-chain dehydrogenase/reductase (SDR) from multi-drug resistant Acinetobacter baumannii
Descriptor: SDR family oxidoreductase
Authors:Shaw, K.I, Ghafoori, S.M, Forwood, J.K.
Deposit date:2023-02-24
Release date:2023-05-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystallographic structure determination and analysis of a potential short-chain dehydrogenase/reductase (SDR) from multi-drug resistant Acinetobacter baumannii.
Plos One, 18, 2023
4C13
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BU of 4c13 by Molmil
x-ray crystal structure of Staphylococcus aureus MurE with UDP-MurNAc- Ala-Glu-Lys
Descriptor: CHLORIDE ION, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Ruane, K.M, Roper, D.I, Fulop, V, Barreteau, H, Boniface, A, Dementin, S, Blanot, D, Mengin-Lecreulx, D, Gobec, S, Dessen, A, Dowson, C.G, Lloyd, A.J.
Deposit date:2013-08-09
Release date:2013-10-02
Last modified:2021-03-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery of a first-in-class CDK2 selective degrader for AML differentiation therapy.
Nat.Chem.Biol., 2021
5MKS
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BU of 5mks by Molmil
HSP72-NBD bound to compound TCI 8 - Tyr15 in down-conformation
Descriptor: 3-[(2~{R},3~{S},4~{R},5~{R})-5-[6-azanyl-8-[(4-chlorophenyl)methylamino]purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]propyl prop-2-enoate, Heat shock 70 kDa protein 1A
Authors:Pettinger, J, Westwood, I.M, Cronin, N, Le Bihan, Y.-V, Van Montfort, R.L.M.
Deposit date:2016-12-05
Release date:2017-03-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:An Irreversible Inhibitor of HSP72 that Unexpectedly Targets Lysine-56.
Angew. Chem. Int. Ed. Engl., 56, 2017
5MS2
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BU of 5ms2 by Molmil
Crystal structure of the Legionella pneumophila effector protein RavZ in complex with human LC3B
Descriptor: Legionella pneumophila effector protein RavZ, Microtubule-associated proteins 1A/1B light chain 3B
Authors:Pantoom, S, Vetter, I.R, Wu, Y.W.
Deposit date:2016-12-30
Release date:2017-04-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Elucidation of the anti-autophagy mechanism of the Legionella effector RavZ using semisynthetic LC3 proteins.
Elife, 6, 2017
5MS6
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BU of 5ms6 by Molmil
High-salt structure of RavZ LIR2-fused human LC3B
Descriptor: Microtubule-associated proteins 1A/1B light chain 3B
Authors:Pantoom, S, Vetter, I.R, Wu, Y.W.
Deposit date:2016-12-31
Release date:2017-04-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Elucidation of the anti-autophagy mechanism of the Legionella effector RavZ using semisynthetic LC3 proteins.
Elife, 6, 2017
6YRF
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BU of 6yrf by Molmil
Vip3Bc1 tetramer
Descriptor: Vegetative insecticidal protein
Authors:Thompson, R.F, Byrne, M.J, Iadanza, M.I, Arribas Perez, M, Maskell, D.P, George, R.M, Hesketh, E.L, Beales, P.A, Zack, M.D, Berry, C.
Deposit date:2020-04-20
Release date:2021-03-17
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structures of an insecticidal Bt toxin reveal its mechanism of action on the membrane.
Nat Commun, 12, 2021
6YRG
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BU of 6yrg by Molmil
Vip3Bc1 tetramer in processed, activated state
Descriptor: Vegetative insecticidal protein
Authors:Thompson, R.F, Byrne, M.J, Iadanza, M.I.
Deposit date:2020-04-20
Release date:2021-03-17
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Cryo-EM structures of an insecticidal Bt toxin reveal its mechanism of action on the membrane.
Nat Commun, 12, 2021
5O34
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BU of 5o34 by Molmil
ThnE from S.clavuligerus
Descriptor: Enoyl-CoA hydratase carB homologue
Authors:Valegard, K, Andersson, I.
Deposit date:2017-05-23
Release date:2018-06-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure of ThnE from the thienamycin biosynthesis.
To Be Published

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