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PDB: 17898 results

4D08
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PDE2a catalytic domain in complex with a brain penetrant inhibitor
Descriptor: 1-(5-butoxypyridin-3-yl)-4-methyl-8-(morpholin-4-ylmethyl)[1,2,4]triazolo[4,3-a]quinoxaline, CGMP-DEPENDENT 3', 5'-CYCLIC PHOSPHODIESTERASE, ...
Authors:Buijnsters, P, Andres, J.I, DeAngelis, M, Langlois, X, Rombouts, F, Sanderson, W, Tresadern, G, Trabanco, A, VanHoof, G, VanRoosbroeck, Y.
Deposit date:2014-04-24
Release date:2014-08-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-Based Design of a Potent, Selective, and Brain Penetrating Pde2 Inhibitor with Demonstrated Target Engagement.
Acs Med.Chem.Lett., 5, 2014
2JQH
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VPS4B MIT
Descriptor: Vacuolar protein sorting-associating protein 4B
Authors:Stuchell-Brereton, M.D, Skalicky, J.J, Kieffer, C, Ghaffarian, S, Sundquist, W.I.
Deposit date:2007-06-01
Release date:2007-10-16
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:ESCRT-III recognition by VPS4 ATPases.
Nature, 449, 2007
1Q6B
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Solution Structure of the C-terminal Domain of Thermosynechococcus elongatus KaiA (ThKaiA180C); Ensemble of 25 Structures
Descriptor: Circadian clock protein KaiA homolog
Authors:Vakonakis, I, Sun, J, Golden, S.S, Holzenburg, A, LiWang, A.C.
Deposit date:2003-08-13
Release date:2003-08-19
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR structure of the KaiC-interacting C-terminal domain of KaiA, a circadian clock protein: implications for KaiA-KaiC interaction
Proc.Natl.Acad.Sci.USA, 101, 2004
2JQR
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Solution model of crosslinked complex of cytochrome c and adrenodoxin
Descriptor: Adrenodoxin, mitochondrial, Cytochrome c iso-1, ...
Authors:Xu, X, Reinle, W, Hannemann, F, Konarev, P.V, Svergun, D.I, Bernhardt, R, Ubbink, M.
Deposit date:2007-06-07
Release date:2008-04-22
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Dynamics in a pure encounter complex of two proteins studied by solution scattering and paramagnetic NMR spectroscopy
J.Am.Chem.Soc., 130, 2008
1H2L
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Factor Inhibiting HIF-1 alpha in complex with HIF-1 alpha fragment peptide
Descriptor: 2-OXOGLUTARIC ACID, FACTOR INHIBITING HIF1, FE (II) ION, ...
Authors:Elkins, J.M, Hewitson, K.S, McNeill, L.A, Schlemminger, I, Seibel, J.F, Schofield, C.J.
Deposit date:2002-08-12
Release date:2002-11-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of Factor-Inhibiting Hypoxia-Inducible Factor (Hif) Reveals Mechanism of Oxidative Modification of Hif-1Alpha
J.Biol.Chem., 278, 2003
1H9E
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LEM-LIKE DOMAIN OF HUMAN INNER NUCLEAR MEMBRANE PROTEIN LAP2
Descriptor: LAMINA-ASSOCIATED POLYPEPTIDE 2
Authors:Laguri, C, Gilquin, B, Wolff, N, Romi-Lebrun, R, Courchay, K, Callebaut, I, Worman, H.J, Zinn-Justin, S.
Deposit date:2001-03-08
Release date:2001-06-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Characterization of the Lem Motif Common to Three Human Inner Nuclear Membrane Proteins
Structure, 9, 2001
1QIX
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Porcine pancreatic elastase complexed with human beta-casomorphin-7
Descriptor: BETA-CASOMORPHIN-7, CALCIUM ION, ELASTASE, ...
Authors:Wilmouth, R.C, Clifton, I.J, Hajdu, J, Schofield, C.J.
Deposit date:1999-06-18
Release date:1999-12-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a Specific Acyl-Enzyme Complex Formed between Beta-Casomorphin-7 and Porcine Pancreatic Elastase
Nat.Struct.Biol., 4, 1997
1Q6Q
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Structure of 3-keto-L-gulonate 6-phosphate decarboxylase with bound xylitol 5-phosphate
Descriptor: 3-keto-L-gulonate 6-phosphate decarboxylase, L-XYLITOL 5-PHOSPHATE, MAGNESIUM ION
Authors:Wise, E.L, Yew, W.S, Gerlt, J.A, Rayment, I.
Deposit date:2003-08-13
Release date:2003-10-28
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.695 Å)
Cite:Structural Evidence for a 1,2-Enediolate Intermediate in the Reaction Catalyzed by 3-Keto-l-Gulonate 6-Phosphate Decarboxylase, a Member of the Orotidine 5'-Monophosphate Decarboxylase Suprafamily
Biochemistry, 42, 2003
1GSP
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RIBONUCLEASE T1 COMPLEXED WITH 2',3'-CGPS, 1 DAY
Descriptor: CALCIUM ION, GUANOSINE-2',3'-CYCLOPHOSPHOROTHIOATE, RIBONUCLEASE T1
Authors:Zegers, I, Wyns, L.
Deposit date:1997-11-28
Release date:1998-02-25
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Hydrolysis of a slow cyclic thiophosphate substrate of RNase T1 analyzed by time-resolved crystallography.
Nat.Struct.Biol., 5, 1998
1QB3
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CRYSTAL STRUCTURE OF THE CELL CYCLE REGULATORY PROTEIN CKS1
Descriptor: CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT
Authors:Bourne, Y, Watson, M.H, Arvai, A.S, Bernstein, S.L, Reed, S.I, Tainer, J.A.
Deposit date:1999-04-30
Release date:2000-08-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure and mutational analysis of the Saccharomyces cerevisiae cell cycle regulatory protein Cks1: implications for domain swapping, anion binding and protein interactions.
Structure Fold.Des., 8, 2000
1E9K
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The structure of the RACK1 interaction sites located within the unique N-terminal region of the cAMP-specific phosphodiesterase, PDE4D5.
Descriptor: cAMP-specific 3',5'-cyclic phosphodiesterase 4D
Authors:Bolger, G.B, Smith, K.J, McCahill, A, Hyde, E.I, Steele, M.R, Houslay, M.D.
Deposit date:2000-10-20
Release date:2001-10-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:1H NMR structural and functional characterisation of a cAMP-specific phosphodiesterase-4D5 (PDE4D5) N-terminal region peptide that disrupts PDE4D5 interaction with the signalling scaffold proteins, beta-arrestin and RACK1.
Cell. Signal., 19, 2007
1QRW
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CRYSTAL STRUCTURE OF AN ALPHA-LYTIC PROTEASE MUTANT WITH ACCELERATED FOLDING KINETICS, R102H/G134S, PH 8
Descriptor: ALHPA-LYTIC PROTEASE, GLYCEROL, SULFATE ION
Authors:Derman, A.I, Mau, T, Agard, D.A.
Deposit date:1999-06-16
Release date:1999-06-18
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:A Genetic Screen That Targets Specifically the Folding Transition State of Alpha-Lytic Protease
To be Published, 1999
2G3Q
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Solution Structure of Ede1 UBA-ubiquitin complex
Descriptor: Protein YBL047C, Ubiquitin
Authors:Swanson, K.A, Hicke, L, Radhakrishnan, I.
Deposit date:2006-02-20
Release date:2006-05-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural Basis for Monoubiquitin Recognition by the Ede1 UBA Domain.
J.Mol.Biol., 358, 2006
1F0R
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CRYSTAL STRUCTURE OF HUMAN COAGULATION FACTOR XA COMPLEXED WITH RPR208815
Descriptor: CALCIUM ION, COAGULATION FACTOR XA, THIENO[3,2-B]PYRIDINE-2-SULFONIC ACID [1-(1-AMINO-ISOQUINOLIN-7-YLMETHYL)-2-OXO-PYRROLDIN-3-YL]-AMIDE
Authors:Maignan, S, Guilloteau, J.P, Pouzieux, S, Choi-Sledeski, Y.M, Becker, M.R, Klein, S.I, Ewing, W.R, Pauls, H.W, Spada, A.P, Mikol, V.
Deposit date:2000-05-17
Release date:2000-09-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of human factor Xa complexed with potent inhibitors.
J.Med.Chem., 43, 2000
1F0I
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THE FIRST CRYSTAL STRUCTURE OF A PHOSPHOLIPASE D
Descriptor: PHOSPHATE ION, PHOSPHOLIPASE D
Authors:Leiros, I, Secundo, F, Zambonelli, C, Servi, S, Hough, E.
Deposit date:2000-05-16
Release date:2001-05-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The first crystal structure of a phospholipase D.
Structure Fold.Des., 8, 2000
1F0T
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BOVINE TRYPSIN COMPLEXED WITH RPR131247
Descriptor: 4-HYDROXY-3-[2-OXO-3-(THIENO[3,2-B]PYRIDINE-2-SULFONYLAMINO)-PYRROLIDIN-1-YLMETHYL]-BENZAMIDINE, CALCIUM ION, SULFATE ION, ...
Authors:Maignan, S, Guilloteau, J.P, Pouzieux, S, Choi-Sledeski, Y.M, Becker, M.R, Klein, S.I, Ewing, W.R, Pauls, H.W, Spada, A.P, Mikol, V.
Deposit date:2000-05-17
Release date:2000-09-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of human factor Xa complexed with potent inhibitors.
J.Med.Chem., 43, 2000
1QYK
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GCATGCT + Barium
Descriptor: 5'-D(*GP*CP*AP*TP*GP*CP*T)-3', BARIUM ION
Authors:Cardin, C.J, Gan, Y, Thorpe, J.H, Teixeira, S.C.M, Gale, B.C, Moraes, M.I.A.
Deposit date:2003-09-11
Release date:2003-10-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Metal Ion Distribution and Stabilization of the DNA Quadruplex Structure Formed by d(GCATGCT)
To be published
1Q6O
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Structure of 3-keto-L-gulonate 6-phosphate decarboxylase with bound L-gulonaet 6-phosphate
Descriptor: 3-keto-L-gulonate 6-phosphate decarboxylase, L-GULURONIC ACID 6-PHOSPHATE, MAGNESIUM ION
Authors:Wise, E.L, Yew, W.S, Gerlt, J.A, Rayment, I.
Deposit date:2003-08-13
Release date:2003-10-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.202 Å)
Cite:Structural Evidence for a 1,2-Enediolate Intermediate in the Reaction Catalyzed by 3-Keto-l-Gulonate 6-Phosphate Decarboxylase, a Member of the Orotidine 5'-Monophosphate Decarboxylase Suprafamily
Biochemistry, 42, 2003
1F2V
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CRYSTAL STRUCTURE ANALYSIS OF PRECORRIN-8X METHYLMUTASE OF AEROBIC VITAMIN B12 SYNTHESIS
Descriptor: PRECORRIN-8X METHYLMUTASE
Authors:Shipman, L.W, Li, D, Roessner, C.A, Scott, A.I, Sacchettini, J.C.
Deposit date:2000-05-29
Release date:2001-07-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of precorrin-8x methyl mutase.
Structure, 9, 2001
2JNZ
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Solution structure of phl p 3, a major allergen from timothy grass pollen
Descriptor: Phl p 3 allergen
Authors:Schweimer, K, Matecko, I, Roesch, P.
Deposit date:2007-02-15
Release date:2008-03-04
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Solution structure of Phl p 3, a major allergen from timothy grass pollen
Biol.Chem., 389, 2008
1Q6R
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Structure of 3-keto-L-gulonate 6-phosphate decarboxylase with bound L-xylulose 5-phosphate
Descriptor: 3-keto-L-gulonate 6-phosphate decarboxylase, L-XYLULOSE 5-PHOSPHATE, MAGNESIUM ION
Authors:Wise, E.L, Yew, W.S, Gerlt, J.A, Rayment, I.
Deposit date:2003-08-13
Release date:2003-10-28
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural Evidence for a 1,2-Enediolate Intermediate in the Reaction Catalyzed by 3-Keto-l-Gulonate 6-Phosphate Decarboxylase, a Member of the Orotidine 5'-Monophosphate Decarboxylase Suprafamily
Biochemistry, 42, 2003
2JPP
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Structural basis of RsmA/CsrA RNA recognition: Structure of RsmE bound to the Shine-Dalgarno sequence of hcnA mRNA
Descriptor: RNA (5'-R(*GP*GP*GP*CP*UP*UP*CP*AP*CP*GP*GP*AP*UP*GP*AP*AP*GP*CP*CP*C)-3'), Translational repressor
Authors:Schubert, M, Lapouge, K, Duss, O, Oberstrass, F.C, Jelesarov, I, Haas, D, Allain, F.H.-T.
Deposit date:2007-05-21
Release date:2007-08-21
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Molecular basis of messenger RNA recognition by the specific bacterial repressing clamp RsmA/CsrA
Nat.Struct.Mol.Biol., 14, 2007
1F4K
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CRYSTAL STRUCTURE OF THE REPLICATION TERMINATOR PROTEIN/B-SITE DNA COMPLEX
Descriptor: 5'-D(*CP*TP*AP*TP*GP*AP*AP*CP*AP*TP*AP*AP*TP*GP*TP*TP*CP*AP*TP*AP*G)-3', 5'-D(*CP*TP*AP*TP*GP*AP*AP*CP*AP*TP*TP*AP*TP*GP*TP*TP*CP*AP*TP*AP*G)-3', REPLICATION TERMINATION PROTEIN
Authors:Wilce, J.A, Vivian, J.P, Hastings, A.F, Otting, G, Folmer, R.H.A, Duggin, I.G, Wake, R.G, Wilce, M.C.J.
Deposit date:2000-06-08
Release date:2001-06-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the RTP-DNA complex and the mechanism of polar replication fork arrest
Nat.Struct.Biol., 8, 2001
2JNP
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Solution structure of matrix metalloproteinase 3 (MMP-3) in the presence of N-isobutyl-N-[4-methoxyphenylsulfonyl]glycyl hydroxamic acid (NNGH)
Descriptor: CALCIUM ION, Matrix metalloproteinase-3, N-ISOBUTYL-N-[4-METHOXYPHENYLSULFONYL]GLYCYL HYDROXAMIC ACID, ...
Authors:Alcaraz, L.A, Banci, L, Bertini, I, Cantini, F, Donaire, A, Gonnelli, L.
Deposit date:2007-01-30
Release date:2007-12-11
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Matrix metalloproteinase-inhibitor interaction: the solution structure of the catalytic domain of human matrix metalloproteinase-3 with different inhibitors
J.Biol.Inorg.Chem., 12, 2007
1EZQ
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CRYSTAL STRUCTURE OF HUMAN COAGULATION FACTOR XA COMPLEXED WITH RPR128515
Descriptor: 3-[(3'-AMINOMETHYL-BIPHENYL-4-CARBONYL)-AMINO]-2-(3-CARBAMIMIDOYL-BENZYL)-BUTYRIC ACID METHYL ESTER, CALCIUM ION, COAGULATION FACTOR XA
Authors:Maignan, S, Guilloteau, J.P, Pouzieux, S, Choi-Sledeski, Y.M, Becker, M.R, Klein, S.I, Ewing, W.R, Pauls, H.W, Spada, A.P, Mikol, V.
Deposit date:2000-05-11
Release date:2000-09-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of human factor Xa complexed with potent inhibitors.
J.Med.Chem., 43, 2000

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